FC873342
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC873342 vs. ExPASy Swiss-Prot
Match: PTH_BACC1 (Peptidyl-tRNA hydrolase OS=Bacillus cereus (strain ATCC 10987) GN=pth PE=3 SV=2) HSP 1 Score: 158.303 bits (399), Expect = 4.940e-38 Identity = 75/167 (44.91%), Postives = 113/167 (67.66%), Query Frame = 1 Query: 148 LIVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGISVSSVNFKAHFGKGFIGNVPVMLAKPQTFMNASGQSVGSIVSYYKIPLKQVLVIFDDLDLPFSKMRLLPKGGHGGHNGMRSIIDHFKGSREFPRLRIGIGRPPGKMDSVNFVLRPFSKQERQELDFTFQQGVEA 648 LIVGLGNPG++Y TRHN+GF +D +A+ IS++ FK FG GF+ V+L KP T+MN SG+S+ ++ YYKI ++ +V++DDLD+P K+RL KG GGHNG++S I H G++EF R+R+GI RP M V++VL F+ +E ++ + ++ +A Sbjct: 3 LIVGLGNPGREYELTRHNIGFMAIDELAKRWNISLNEQKFKGVFGAGFVNGEKVILLKPLTYMNLSGESIRPLMDYYKIDVEDFVVLYDDLDIPVGKLRLRMKGSAGGHNGVKSTISHL-GTQEFQRIRMGIDRPKNGMKVVDYVLGRFTSEEIPGVNHSIEKAADA 168
BLAST of FC873342 vs. ExPASy Swiss-Prot
Match: PTH_ARTCA (Peptidyl-tRNA hydrolase OS=Arthrobacter chlorophenolicus (strain A6 / ATCC 700700 / DSM 12829 / JCM 12360) GN=pth PE=3 SV=1) HSP 1 Score: 157.918 bits (398), Expect = 6.452e-38 Identity = 81/190 (42.63%), Postives = 117/190 (61.58%), Query Frame = 1 Query: 145 WLIVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGISVSSVNFKAHFGKGF--IGNVPVMLAKPQTFMNASGQSVGSIVSYYKIPLKQVLVIFDDLDLPFSKMRLLPKGGHGGHNGMRSIIDHFKGSREFPRLRIGIGRPPGKMDSVNFVLRPFSKQERQELDFTFQQGVEAVRILLLEGFNKAATFVNTAK 708 WLIVGLGNPG QY G RHNVG ++D +A G S +A +G IG V+LAKP T+MN SG V ++ ++Y I V+ + D++D+PF+ ++L GG GGHNG+R I ++++ R+R+G+GRPPG+MD+ ++VLR F E +EL F + +AV +LL EG A + AK Sbjct: 5 WLIVGLGNPGAQYQGNRHNVGQMVLDELAGRVGAGFKSHKARAQVVEGRLGIGGPRVVLAKPMTYMNVSGGPVSALANFYGISPDHVVAVHDEIDIPFNTVKLKIGGGEGGHNGLRD-ISKALATKDYLRVRVGVGRPPGRMDTADYVLRDFGTAELKELPFLLDEAADAVELLLQEGLTAAQQKFHPAK 193
BLAST of FC873342 vs. ExPASy Swiss-Prot
Match: CRS2L_ORYSJ (CRS2-like protein, chloroplastic OS=Oryza sativa subsp. japonica GN=Os03g0347800 PE=2 SV=1) HSP 1 Score: 157.918 bits (398), Expect = 6.452e-38 Identity = 70/114 (61.40%), Postives = 92/114 (80.70%), Query Frame = 1 Query: 139 HPWLIVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGISVSSVNFKAHFGKGFIGNVPVMLAKPQTFMNASGQSVGSIVSYYKIPLKQVLVIFDDLDLPFSKMRLLPKGGHGGHNG 480 +PWL VGLGNPG++Y TRHNVGF+M+D A+++GIS++ FKA FG+G + VPV+LAKPQT+MN SG+SVG + +YYK+PL +VLV FDD+DLP +RL PKGG+G HNG Sbjct: 59 NPWLFVGLGNPGEKYQCTRHNVGFDMIDMFAQSQGISLTRHPFKALFGEGMVEGVPVLLAKPQTYMNLSGESVGPLAAYYKLPLNRVLVAFDDMDLPCGVLRLQPKGGYGRHNG 172
BLAST of FC873342 vs. ExPASy Swiss-Prot
Match: PTH_CLOBA (Peptidyl-tRNA hydrolase OS=Clostridium botulinum (strain Alaska E43 / Type E3) GN=pth PE=3 SV=1) HSP 1 Score: 157.147 bits (396), Expect = 1.101e-37 Identity = 76/188 (40.43%), Postives = 121/188 (64.36%), Query Frame = 1 Query: 145 WLIVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGISVSSVNFKAHFGKGFIGNVPVMLAKPQTFMNASGQSVGSIVSYYKIPLKQVLVIFDDLDLPFSKMRLLPKGGHGGHNGMRSIIDHFKGSREFPRLRIGIGRPPGKMDSVNFVLRPFSKQERQELDFTFQQGVEAVRILLLEGFNKAATFVNTAK 708 +LIVGLGNPG +Y+ TRHN+GFE++D I+ I ++ FK +G+GFI N V+L KP T+MN SG SV + ++YKI + ++VI+DD+ L ++R+ KG GGHNG++SII + + FPR+++G+G+P + V++VL FSK+E++ L + + +V ++ + N A N K Sbjct: 2 FLIVGLGNPGSKYDNTRHNIGFEVIDNISNEYNIDINRQKFKGVYGEGFIANNKVILLKPTTYMNLSGDSVREVANFYKISNENIIVIYDDISLDIGRLRIREKGSAGGHNGIKSIIANL-STDVFPRIKVGVGQPNDNL--VDYVLGKFSKEEKEVLKESIEAATNSVEEIIKQDINSAMNKFNGFK 186
BLAST of FC873342 vs. ExPASy Swiss-Prot
Match: PTH_ANAVT (Peptidyl-tRNA hydrolase OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=pth PE=3 SV=1) HSP 1 Score: 157.147 bits (396), Expect = 1.101e-37 Identity = 89/194 (45.88%), Postives = 121/194 (62.37%), Query Frame = 1 Query: 142 PWLIVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGISVS-SVNFKAHFGKGFI-GNVPVMLAKPQTFMNASGQSVGSIVSYYKIPLKQVLVIFDDLDLPFSKMRLLPKGGHGGHNGMRSIIDHFKGSREFPRLRIGIGRPPGKM-----DSVNFVLRPFSKQERQELDFTFQQGVEAVRILLLEGFNKAATFVNT 702 P LIVGLGNP +Y+ TRHN+GF VDA+A A IS++ + F+ +G+G G V + L KP T+MN SGQ++ ++ S+YK+ + VLVI+DDLDLP K RL G GGHNGM+S I H ++ FPRLRIGIG+P + ++V+ VL FS E Q + Q VE V + L +G KA N+ Sbjct: 13 PQLIVGLGNPEPKYDQTRHNIGFAAVDALARAWNISLAENRKFQGQYGEGTAPGGVKIRLLKPLTYMNRSGQAIQAVTSWYKLSGESVLVIYDDLDLPLGKTRLRLSGSAGGHNGMKSAIAHL-STQNFPRLRIGIGKPKNAVNGDNSETVSHVLGKFSATETQLMSLVLQFVVECVELSLKQGVEKAMNRCNS 205
BLAST of FC873342 vs. ExPASy Swiss-Prot
Match: PTH_ANASP (Peptidyl-tRNA hydrolase OS=Anabaena sp. (strain PCC 7120) GN=pth PE=3 SV=1) HSP 1 Score: 157.147 bits (396), Expect = 1.101e-37 Identity = 89/194 (45.88%), Postives = 121/194 (62.37%), Query Frame = 1 Query: 142 PWLIVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGISVS-SVNFKAHFGKGFI-GNVPVMLAKPQTFMNASGQSVGSIVSYYKIPLKQVLVIFDDLDLPFSKMRLLPKGGHGGHNGMRSIIDHFKGSREFPRLRIGIGRPPGKM-----DSVNFVLRPFSKQERQELDFTFQQGVEAVRILLLEGFNKAATFVNT 702 P LIVGLGNP +Y+ TRHN+GF VDA+A A IS++ + F+ +G+G G V + L KP T+MN SGQ++ ++ S+YK+ + VLVI+DDLDLP K RL G GGHNGM+S I H ++ FPRLRIGIG+P + ++V+ VL FS E Q + Q VE V + L +G KA N+ Sbjct: 3 PQLIVGLGNPEPKYDQTRHNIGFAAVDALARAWNISLAENRKFQGQYGEGTAPGGVKIRLLKPLTYMNRSGQAIQAVTSWYKLSGESVLVIYDDLDLPLGKTRLRLSGSAGGHNGMKSAIAHL-STQNFPRLRIGIGKPKNAVNGDNSETVSHVLGKFSATETQLMSLVLQFVVECVELSLKQGVEKAMNRCNS 195
BLAST of FC873342 vs. ExPASy Swiss-Prot
Match: PTH_ALKMQ (Peptidyl-tRNA hydrolase OS=Alkaliphilus metalliredigens (strain QYMF) GN=pth PE=3 SV=1) HSP 1 Score: 157.147 bits (396), Expect = 1.101e-37 Identity = 79/185 (42.70%), Postives = 122/185 (65.95%), Query Frame = 1 Query: 145 WLIVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGISVSSVNFKAHFGKGFIGNVPVMLAKPQTFMNASGQSVGSIVSYYKIPLKQVLVIFDDLDLPFSKMRLLPKGGHGGHNGMRSIIDHFKGSREFPRLRIGIGRPPGKMDSVNFVLRPFSKQERQELDFTFQQGVEAVRILLLEGFNKAATFVN 699 ++IVGLGNPGK+Y+GTRHNVGF+++D +A GI+V+ + KA +G+ IG V+LAKPQTFMN SG+S+ ++ +YKI + ++VI+DD+D+ +R+ G G HNGM+S I + + FPR+RIG+GRP D N+VL F+K E + + ++ V ++++G +KA N Sbjct: 2 YIIVGLGNPGKKYSGTRHNVGFDVIDLLAHRLGITVNKLKHKALYGEARIGGEKVILAKPQTFMNLSGESIREMMQFYKIDPENLIVIYDDIDVKVGSLRIRQSGSAGTHNGMKSTIYQLQ-TDAFPRIRIGVGRPEFG-DLSNYVLGSFTKDEIPLMKESLERATLTVESIVIDGIDKAMNRYN 184
BLAST of FC873342 vs. ExPASy Swiss-Prot
Match: PTH_ROSS1 (Peptidyl-tRNA hydrolase OS=Roseiflexus sp. (strain RS-1) GN=pth PE=3 SV=1) HSP 1 Score: 156.762 bits (395), Expect = 1.437e-37 Identity = 83/190 (43.68%), Postives = 114/190 (60.00%), Query Frame = 1 Query: 145 WLIVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGISVSSVNFKAHFGKGFIGNVPVMLAKPQTFMNASGQSVGSIVSYYKI-PLKQVLVIFDDLDLPFSKMRLLPKGGHGGHNGMRSIIDHFKGSREFPRLRIGIGRPPGKMDSVNFVLRPFSKQERQELDFTFQQGVEAVRILLLEGFNKAATFVNTAKP 711 WLIVGLGNPG Y TRHN+GF +V +A+ + + A +G I V LA PQT+MN SGQ+V + +YKI P ++LV++DD+DLPF +RL +G G HNGMRSII GS+ FPRLRIGI RPP D ++VL F+ ++ +L Q+ +A+ ++ EG A +N P Sbjct: 2 WLIVGLGNPGDTYARTRHNIGFRVVSELAQRHRLEFTHKRAHARIAEGIIAGQRVALALPQTYMNLSGQAVVGLRQWYKIDPATELLVVYDDVDLPFGVLRLRERGSAGTHNGMRSIIT-LLGSQVFPRLRIGIDRPPPAWDLADYVLGRFTPEQEAQLPDIMQKAADALETVVREGMAVAMNRINAPPP 190
BLAST of FC873342 vs. ExPASy Swiss-Prot
Match: PTH_GEOKA (Peptidyl-tRNA hydrolase OS=Geobacillus kaustophilus GN=pth PE=3 SV=1) HSP 1 Score: 156.377 bits (394), Expect = 1.877e-37 Identity = 80/185 (43.24%), Postives = 116/185 (62.70%), Query Frame = 1 Query: 148 LIVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGISVSSVNFKAHFGKGFIGNVPVMLAKPQTFMNASGQSVGSIVSYYKIPLKQVLVIFDDLDLPFSKMRLLPKGGHGGHNGMRSIIDHFKGSREFPRLRIGIGRPPGKMDSVNFVLRPFSKQERQELDFTF-------QQGVEAVRILLLEGFNK 681 L VGLGNPGK+Y TRHNVGF ++D +A+ +S+ + F+ FG + V L KP T+MN SG+ V ++ YY I + V+VI+DDLDLP K+RL KG GGHNG++S+I H G+ +F R+RIGIGRP G ++VL F+++E+ +D +Q V+A I ++ FN+ Sbjct: 3 LFVGLGNPGKEYEQTRHNVGFFVIDELAKRWNVSLKTAKFRGLFGTASVSGEKVALCKPLTYMNLSGECVRPLMDYYDIAIDDVIVIYDDLDLPPGKIRLRLKGSSGGHNGVKSLIHHL-GTEQFKRIRIGIGRPAGGQPVTDYVLGRFTEEEKPAVDKAVLRAADACEQAVKAPFIQVMNDFNE 186
BLAST of FC873342 vs. ExPASy Swiss-Prot
Match: PTH_CLOPH (Peptidyl-tRNA hydrolase OS=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) GN=pth PE=3 SV=1) HSP 1 Score: 155.992 bits (393), Expect = 2.452e-37 Identity = 74/185 (40.00%), Postives = 117/185 (63.24%), Query Frame = 1 Query: 145 WLIVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGISVSSVNFKAHFGKGFIGNVPVMLAKPQTFMNASGQSVGSIVSYYKIPLKQVLVIFDDLDLPFSKMRLLPKGGHGGHNGMRSIIDHFKGSREFPRLRIGIGRPPGKMDSVNFVLRPFSKQERQELDFTFQQGVEAVRILLLEGFNKAATFVN 699 ++I+GLGNP ++Y TRHN+GF+ + +A+ IS+ + KA GKG IG V+LAKPQT+MN SG+SV ++ +YK+ ++++VI+DD+ L ++R+ KG GGHNG+++II H GS EF R++IG+G P D ++VL F K+E + ++ +A +L +G A N Sbjct: 2 YIIIGLGNPTREYEATRHNIGFDAITRLADDNNISLDTKKHKAICGKGMIGGEKVILAKPQTYMNLSGESVRELIDFYKVTKEEIIVIYDDISLDVGQLRIRTKGSAGGHNGIKNIIAHL-GSDEFCRIKIGVGDKPKNWDLADYVLARFPKEEEPAIREALEKVSKACETILRDGAKVAMNLFN 185 The following BLAST results are available for this feature:
BLAST of FC873342 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC873342 ID=FC873342; Name=FC873342; organism=Citrus clementina; type=EST; length=844bpback to top |