FC873342
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC873342 vs. ExPASy Swiss-Prot
Match: PTH_ROSCS (Peptidyl-tRNA hydrolase OS=Roseiflexus castenholzii (strain DSM 13941 / HLO8) GN=pth PE=3 SV=1) HSP 1 Score: 155.221 bits (391), Expect = 4.182e-37 Identity = 82/190 (43.16%), Postives = 117/190 (61.58%), Query Frame = 1 Query: 145 WLIVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGISVSSVNFKAHFGKGFIGNVPVMLAKPQTFMNASGQSVGSIVSYYKI-PLKQVLVIFDDLDLPFSKMRLLPKGGHGGHNGMRSIIDHFKGSREFPRLRIGIGRPPGKMDSVNFVLRPFSKQERQELDFTFQQGVEAVRILLLEGFNKAATFVNTAKP 711 WLIVGLGNPG+ Y TRHN+GF +V +A+ + + KA +G I V LA PQT+MN SGQ+V + +YKI P ++LV++DD+DLPF +RL +G G HNGMRSI+ GS+ FPRLRIGI RPP + ++VL F+ ++ +L ++ +A+ ++L EG A +N P Sbjct: 2 WLIVGLGNPGETYARTRHNIGFRVVTELAQRHHLRFTHKRAKAEIAEGEIAGQRVALALPQTYMNLSGQAVVGLRQWYKIDPATELLVVYDDVDLPFGVLRLRERGSAGTHNGMRSIV-ALLGSQVFPRLRIGIDRPPVAWNLADYVLARFTPEQEAQLPEVTRRAADALELVLREGIVVAMNRINAPPP 190
BLAST of FC873342 vs. ExPASy Swiss-Prot
Match: PTH_GLOVI (Peptidyl-tRNA hydrolase OS=Gloeobacter violaceus GN=pth PE=3 SV=1) HSP 1 Score: 154.836 bits (390), Expect = 5.462e-37 Identity = 82/185 (44.32%), Postives = 116/185 (62.70%), Query Frame = 1 Query: 148 LIVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGIS-VSSVNFKAHFGKGFIGNVPVMLAKPQTFMNASGQSVGSIVSYYKIPLKQVLVIFDDLDLPFSKMRLLPKGGHGGHNGMRSIIDHFKGSREFPRLRIGIGRPPGKMDSVNFVLRPFSKQERQELDFTFQQGVEAVRILLLEGFNKAATFVN 699 L VGLGNPG QY TRHN GF VDA+A+ S V FK + +G +L KP T+MN SGQSV ++ Y+++P +Q+LV++D++ LP K+RL P+G GHNG++S+I+H G+ +F RLRIGIGR P N+VL F+ +E+++L VEAV +L +G KA + N Sbjct: 5 LFVGLGNPGLQYTQTRHNAGFLAVDALAKRWQCSWVEKSRFKGYLAEGAGPGGRAILLKPTTYMNHSGQSVRAVADYFRLPPQQLLVLYDEVALPLGKIRLRPEGSAAGHNGIKSLIEHL-GTNQFARLRIGIGREPPPPVLTNYVLGKFAPEEQEQLPAILDGCVEAVEAVLAKGLEKAMSIYN 188
BLAST of FC873342 vs. ExPASy Swiss-Prot
Match: PTH_EUBE2 (Peptidyl-tRNA hydrolase OS=Eubacterium eligens (strain ATCC 27750 / VPI C15-48) GN=pth PE=3 SV=1) HSP 1 Score: 154.836 bits (390), Expect = 5.462e-37 Identity = 78/185 (42.16%), Postives = 108/185 (58.38%), Query Frame = 1 Query: 145 WLIVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGISVSSVNFKAHFGKGFIGNVPVMLAKPQTFMNASGQSVGSIVSYYKIPLKQVLVIFDDLDLPFSKMRLLPKGGHGGHNGMRSIIDHFKGSREFPRLRIGIGRPPGKMDSVNFVLRPFSKQERQELDFTFQQGVEAVRILLLEGFNKAATFVN 699 ++I GLGNPGK+Y GTRHN GF ++D +A+ ISV + K GKG I V+L KP T+MN SG+ + ++ YYK + LVIFDD+ L K+RL KG GGHNG++SII H GS +F R++ G+G P D ++VL F +E L ++ EAV +L +G N Sbjct: 2 YIIAGLGNPGKEYMGTRHNAGFSVIDELADKYNISVDTAKHKGLIGKGVIAGQKVILVKPMTYMNNSGECIREVMDYYKCDIDDFLVIFDDISLDVGKLRLRAKGSAGGHNGIKSIIAHL-GSDKFKRIKFGVGDKPKNWDLADWVLGKFPAEEYATLREANKKACEAVECILTDGIESGMNKYN 185
BLAST of FC873342 vs. ExPASy Swiss-Prot
Match: PTH_CLOPS (Peptidyl-tRNA hydrolase OS=Clostridium perfringens (strain SM101 / Type A) GN=pth PE=3 SV=1) HSP 1 Score: 154.836 bits (390), Expect = 5.462e-37 Identity = 73/158 (46.20%), Postives = 111/158 (70.25%), Query Frame = 1 Query: 148 LIVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGISVSSVNFKAHFGKGFIGNVPVMLAKPQTFMNASGQSVGSIVSYYKIPLKQVLVIFDDLDLPFSKMRLLPKGGHGGHNGMRSIIDHFKGSREFPRLRIGIGRPPGKMDSVNFVLRPFSKQERQELD 621 LIVGLGNPGKQY TRHN+GF+++D +A I V+ FK G+GFI N V+L KP T+MN SG+S+ V++YK+ +++V++DD+ L ++R+ KG GGHNG++SII + G + FPR+++G+G+P K + VN VL FSK++R+ ++ Sbjct: 3 LIVGLGNPGKQYEKTRHNIGFDVIDYMANKYNIDVNREKFKGICGEGFIENKKVILLKPLTYMNLSGESIREFVNFYKLEDDEIIVVYDDISLDIGRLRIREKGSAGGHNGIKSIIQNLGGDK-FPRVKVGVGQP--KDNLVNHVLGKFSKEDREHIE 157
BLAST of FC873342 vs. ExPASy Swiss-Prot
Match: PTH_BREBN (Peptidyl-tRNA hydrolase OS=Brevibacillus brevis (strain 47 / JCM 6285 / NBRC 100599) GN=pth PE=3 SV=1) HSP 1 Score: 154.836 bits (390), Expect = 5.462e-37 Identity = 81/188 (43.09%), Postives = 117/188 (62.23%), Query Frame = 1 Query: 148 LIVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGISVSSVNFKAHFGKGFIGNVPVMLAKPQTFMNASGQSVGSIVSYYKIPLKQVLVIFDDLDLPFSKMRLLPKGGHGGHNGMRSIIDHFKGSREFPRLRIGIGRP-PGKMDSVNFVLRPFSKQERQELDFTFQQGVEAVRILLLEGFNKAATFVNTAK 708 +I+GLGNPGK+Y TRHN GF +D I++ GI V+ F+A G+G I V+L KPQT+MN SG+SV ++ +YK+ ++VI+DDLDLP +RL KG GGHNG++S+I H G++EF R+++GI RP PG+ S ++VL F ER ++ +A + E F K N+ K Sbjct: 3 VIIGLGNPGKKYEDTRHNAGFMAIDKISDKWGIPVTQNKFRALVGEGRIEGEKVLLVKPQTYMNLSGESVAEVLKFYKLIPDDLVVIYDDLDLPTGHLRLREKGSAGGHNGIKSMIQHL-GTQEFKRIKVGISRPEPGRSVS-DYVLNTFPVAERADIQEAVSLAADACAMWTRESFLKVMNHFNSLK 188
BLAST of FC873342 vs. ExPASy Swiss-Prot
Match: PTH_TRIEI (Peptidyl-tRNA hydrolase OS=Trichodesmium erythraeum (strain IMS101) GN=pth PE=3 SV=1) HSP 1 Score: 154.451 bits (389), Expect = 7.133e-37 Identity = 84/194 (43.30%), Postives = 123/194 (63.40%), Query Frame = 1 Query: 142 PWLIVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGISVS-SVNFKAHFGKGFIGNVP-VMLAKPQTFMNASGQSVGSIVSYYKIPLKQVLVIFDDLDLPFSKMRLLPKGGHGGHNGMRSIIDHFKGSREFPRLRIGIGRPP------GKMDSVNFVLRPFSKQERQELDFTFQQGVEAVRILLLEGFNKAATFVN 699 P LIVGLGNP +Y+ TRHN+GF +D IA +S+S + FK FG+G + L KP T+MN SG+++ ++V++YK+P VL+I+DD+DLP ++RL G GGHNGM+S I H G++EFPRLRIGIG+P G+ +++ VL FS +E + + + V+AV + L +G KA + N Sbjct: 13 PKLIVGLGNPEPKYDQTRHNIGFTGIDTIANIWQVSLSENRKFKGEFGEGRRPKAEKIYLLKPLTYMNRSGEAISAVVNWYKLPPSCVLIIYDDMDLPMGRLRLRLSGSAGGHNGMKSAIAHL-GTQEFPRLRIGIGKPKNITAERGEAKTISHVLGKFSPKENKLMTQVLELVVDAVELSLKQGIEKAMSLYN 205
BLAST of FC873342 vs. ExPASy Swiss-Prot
Match: PTH_SYNAS (Peptidyl-tRNA hydrolase OS=Syntrophus aciditrophicus (strain SB) GN=pth PE=3 SV=1) HSP 1 Score: 154.451 bits (389), Expect = 7.133e-37 Identity = 83/184 (45.11%), Postives = 111/184 (60.33%), Query Frame = 1 Query: 148 LIVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGISVSSVNFKAHFGKGFIGNVPVMLAKPQTFMNASGQSVGSIVSYYKIPLKQVLVIFDDLDLPFSKMRLLPKGGHGGHNGMRSIIDHFKGSREFPRLRIGIGRPPGKMDSVNFVLRPFSKQERQELDFTFQQGVEAVRILLLEGFNKAATFVN 699 LIVGLGNPG +Y TRHN GF ++D +AE + I +S F A +GKG I V+LAKPQTFMN SG+SV + ++KI ++ VLV+ DDLDLPF +RL GG GGH G+ SI D G EF R+R+GIG+P + +VL PF++ E + L A+ ++ G A N Sbjct: 3 LIVGLGNPGARYRFTRHNFGFFVLDQLAEDQDIMMSQTGFDALWGKGVIAGQSVLLAKPQTFMNLSGKSVRKLADFFKIVVEDVLVVHDDLDLPFGVIRLKAGGGQGGHKGLISICDSL-GGPEFQRVRLGIGKPAQRSAVERYVLEPFTESELRILPRIIVTARSAILEVISSGIKTAMNSYN 185
BLAST of FC873342 vs. ExPASy Swiss-Prot
Match: PTH_PELCD (Peptidyl-tRNA hydrolase OS=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) GN=pth PE=3 SV=1) HSP 1 Score: 154.451 bits (389), Expect = 7.133e-37 Identity = 78/184 (42.39%), Postives = 113/184 (61.41%), Query Frame = 1 Query: 148 LIVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGISVSSVNFKAHFGKGFIGNVPVMLAKPQTFMNASGQSVGSIVSYYKIPLKQVLVIFDDLDLPFSKMRLLPKGGHGGHNGMRSIIDHFKGSREFPRLRIGIGRPPGKMDSVNFVLRPFSKQERQELDFTFQQGVEAVRILLLEGFNKAATFVN 699 L+VGLGNPG +Y TRHN+GF + A+ G+S+ ++ G G M+ PQT+MN SG SV S I ++ V+VI D++DLPF +R+ GGHGGHNG+RSI+D G R+F R+R+G+GRP G++D +VL FS E+ +LD + V+A+ +LL +G +A N Sbjct: 3 LVVGLGNPGPEYAATRHNIGFLVAQKFAQQMGVSLKRQAYQGIVGTGRADGQETMVLLPQTYMNRSGVSVVSACKSKGIAVEDVVVIHDEIDLPFGSIRIKVGGGHGGHNGLRSIVD-LLGCRDFLRVRMGVGRPQGQVDVAKYVLGQFSSTEKSQLDNVLENSVKALEVLLQKGAQQAMNEFN 185
BLAST of FC873342 vs. ExPASy Swiss-Prot
Match: PTH_NOCFA (Peptidyl-tRNA hydrolase OS=Nocardia farcinica GN=pth PE=3 SV=1) HSP 1 Score: 154.451 bits (389), Expect = 7.133e-37 Identity = 80/187 (42.78%), Postives = 115/187 (61.50%), Query Frame = 1 Query: 142 PWLIVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGISVSSVNFKAHFGKGF------IGNVPVMLAKPQTFMNASGQSVGSIVSYYKIPLKQVLVIFDDLDLPFSKMRLLPKGGHGGHNGMRSIIDHFKGSREFPRLRIGIGRPPGKMDSVNFVLRPFSKQERQELDFTFQQGVEAVRILLLEGFNKA 684 P L+VGLGNPG +Y TRHNVGF + D +AE G F H G + V++AKP+++MN SG+ V ++ ++ +P +V+V+ D+LDLPF +RL GG GGHNG+RSI ++++ R RIGIGRPPG+ D +FVL+PF+ ER+E+ +Q +AV +LL G A Sbjct: 8 PALVVGLGNPGSEYERTRHNVGFLVADVLAERVGD-----RFAVHKKSGADLLQARLDGRQVLIAKPRSYMNLSGRPVAALARFFSVPPTEVIVVHDELDLPFGAVRLKRGGGEGGHNGLRSISSALT-TKDYLRTRIGIGRPPGRQDPADFVLKPFAAAERKEVPVIVEQAADAVELLLRVGLEAA 188
BLAST of FC873342 vs. ExPASy Swiss-Prot
Match: PTH_CLOTE (Peptidyl-tRNA hydrolase OS=Clostridium tetani GN=pth PE=3 SV=1) HSP 1 Score: 154.451 bits (389), Expect = 7.133e-37 Identity = 80/185 (43.24%), Postives = 117/185 (63.24%), Query Frame = 1 Query: 145 WLIVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGISVSSVNFKAHFGKGFIGNVPVMLAKPQTFMNASGQSVGSIVSYYKIPLKQVLVIFDDLDLPFSKMRLLPKGGHGGHNGMRSIIDHFKGSREFPRLRIGIGRPPGKMDSVNFVLRPFSKQERQELDFTFQQGVEAVRILLLEGFNKAATFVN 699 +L+VGLGNPGK+Y TRHN+GFE VD I+ I + FK FG G I N V+L KP T+MN SG+S+ I+ YY IP+ V+VI+DD+DL ++R+ KG GGHNG++SII + S +F RLRIG+G+P + D V+ VL F+K++ + ++ + E ++ +G +A N Sbjct: 2 FLLVGLGNPGKEYEKTRHNIGFEAVDKISYEYNIPIKRERFKGVFGDGRISNEKVILLKPTTYMNLSGESLREIIEYYNIPITNVIVIYDDVDLEVGRLRIRTKGSAGGHNGIKSIIYNL-NSEDFIRLRIGVGKP--QRDMVSHVLGKFAKEDEKNIEEVLKIIPELAYTIINQGPQEAMNKYN 183 The following BLAST results are available for this feature:
BLAST of FC873342 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC873342 ID=FC873342; Name=FC873342; organism=Citrus clementina; type=EST; length=844bpback to top |