FC873342
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC873342 vs. ExPASy Swiss-Prot
Match: PTH_SYNY3 (Peptidyl-tRNA hydrolase OS=Synechocystis sp. (strain PCC 6803) GN=pth PE=3 SV=1) HSP 1 Score: 154.066 bits (388), Expect = 9.316e-37 Identity = 80/187 (42.78%), Postives = 115/187 (61.50%), Query Frame = 1 Query: 142 PWLIVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGIS-VSSVNFKAHFGKGFIGNVPVMLAKPQTFMNASGQSVGSIVSYYKIPLKQVLVIFDDLDLPFSKMRLLPKGGHGGHNGMRSIIDHFKGSREFPRLRIGIGRPPGKMDSVNFVLRPFSKQERQELDFTFQQGVEAVRILLLEGFNKAATFVN 699 P LIVGLGNP +Y+ TRHN+GF +VDA+A S F+ FG+G + L KP+T+MN SGQ+V ++V +YK+ + VLV++DD+DLP ++RL G GGHNGM+S+I H G+++FPRLR+GIG+ G D++ VL FS E ++ + EA+ L G K + N Sbjct: 3 PKLIVGLGNPEPKYDQTRHNIGFAVVDALAITWQCSWYDHKRFQGWFGEGLMAGQKTCLLKPRTYMNRSGQAVRAVVDWYKLDPQSVLVVYDDMDLPLGRLRLRQTGSAGGHNGMKSLISHL-GTQDFPRLRLGIGKSDGSKDTIAHVLGKFSPSELPIVEKSLDLATEAIAHSLHHGIAKTMSLFN 188
BLAST of FC873342 vs. ExPASy Swiss-Prot
Match: PTH_STRCO (Peptidyl-tRNA hydrolase OS=Streptomyces coelicolor GN=pth PE=3 SV=1) HSP 1 Score: 154.066 bits (388), Expect = 9.316e-37 Identity = 84/199 (42.21%), Postives = 118/199 (59.30%), Query Frame = 1 Query: 142 PWLIVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGISVSSVNFKAHFGK-------GFIG-----NVPVMLAKPQTFMNASGQSVGSIVSYYKIPLKQVLVIFDDLDLPFSKMRLLPKGGHGGHNGMRSIIDHFKGSREFPRLRIGIGRPPGKMDSVNFVLRPFSKQERQELDFTFQQGVEAVRILLLEGFNKAATFVNT 702 PWL+ GLGNPG +Y RHNVGF + D +AE G FK H GK G IG N V+LAKP +FMN SG V ++ +YK+P+ ++ + D+LD+ + +RL GG GHNG++SI ++ R+R GIGRPPG+M +FVLR FS ER+ELD+ + +AV L++EG +A + N+ Sbjct: 10 PWLVAGLGNPGPEYASNRHNVGFMVADLLAERIG-----ARFKRH-GKAQAQVVEGRIGPPGPANRRVILAKPMSFMNVSGGPVTALRDFYKVPVGNIVAVHDELDIDYGVLRLKLGGGDNGHNGLKSITKSL--GADYHRVRFGIGRPPGRMPVADFVLRDFSSTERKELDYFVDRAADAVEALVIEGLERAQSAYNS 200
BLAST of FC873342 vs. ExPASy Swiss-Prot
Match: PTH_GEOSL (Peptidyl-tRNA hydrolase OS=Geobacter sulfurreducens GN=pth PE=3 SV=1) HSP 1 Score: 154.066 bits (388), Expect = 9.316e-37 Identity = 81/184 (44.02%), Postives = 114/184 (61.96%), Query Frame = 1 Query: 148 LIVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGISVSSVNFKAHFGKGFIGNVPVMLAKPQTFMNASGQSVGSIVSYYKIPLKQVLVIFDDLDLPFSKMRLLPKGGHGGHNGMRSIIDHFKGSREFPRLRIGIGRPPGKMDSVNFVLRPFSKQERQELDFTFQQGVEAVRILLLEGFNKAATFVN 699 LIVGLGNPG +Y TRHN GF ++D +A A G SV+ +F FG+G ++L KPQT+MN SG+SV + ++K+PL +VI DDLD+PF ++++ GGHGGHNG+RS++ G F R+R+GIGRP D VN+VL FS+ E +L ++ + LL G K + N Sbjct: 5 LIVGLGNPGPKYLWTRHNAGFMVLDRLAHAIGASVTRKSFSGVFGEGAWHGERLLLLKPQTYMNLSGRSVAEALRFHKLPLCDTIVIHDDLDIPFGRVKVKEGGGHGGHNGLRSLVQEL-GGAGFVRVRVGIGRPV-HGDVVNYVLTNFSQDEMADLAHLLDGTLDLLESLLTAGLPKTMSLYN 186
BLAST of FC873342 vs. ExPASy Swiss-Prot
Match: PTH_ENTFA (Peptidyl-tRNA hydrolase OS=Enterococcus faecalis GN=pth PE=3 SV=1) HSP 1 Score: 154.066 bits (388), Expect = 9.316e-37 Identity = 80/185 (43.24%), Postives = 118/185 (63.78%), Query Frame = 1 Query: 148 LIVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGISVSSVNFKAHFGKGFIGNVPVMLAKPQTFMNASGQSVGSIVSYYKIPLKQVLVIFDDLDLPFSKMRLLPKGGHGGHNGMRSIIDHFKGSREFPRLRIGIGRPPGKMDSVNFVLRPFSKQERQELDFTFQQGVEAVRILLLEGFNKAATFVNT 702 +IVGLGNPG +Y T+HN+GF +D IA + +S ++ NF+A + FIG V+L KP TFMN SG+SVG +++Y+ + + ++VI+DDLDL K+RL KG GGHNG++S+I H G+ FPR++IGIGRP ++ VL F K+ +E+ ++ +A + EG TFV T Sbjct: 3 VIVGLGNPGSKYKETKHNIGFITLDEIAYRQNVSFNNSNFEADIAEFFIGTEKVLLVKPLTFMNESGRSVGPLLTYFGVDEEDLIVIYDDLDLEIGKIRLRQKGSAGGHNGIKSLIAHL-GTNVFPRIKIGIGRPSKNDTVIHHVLSTFPKETHEEMLLAVKKAADAA-LYACEGH----TFVET 181
BLAST of FC873342 vs. ExPASy Swiss-Prot
Match: PTH_CLOPE (Peptidyl-tRNA hydrolase OS=Clostridium perfringens GN=pth PE=3 SV=1) HSP 1 Score: 154.066 bits (388), Expect = 9.316e-37 Identity = 72/158 (45.57%), Postives = 111/158 (70.25%), Query Frame = 1 Query: 148 LIVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGISVSSVNFKAHFGKGFIGNVPVMLAKPQTFMNASGQSVGSIVSYYKIPLKQVLVIFDDLDLPFSKMRLLPKGGHGGHNGMRSIIDHFKGSREFPRLRIGIGRPPGKMDSVNFVLRPFSKQERQELD 621 LIVGLGNPGKQY TRHN+GF+++D +A I V+ FK G+GFI N V+L KP T+MN SG+S+ + ++YK+ +++V++DD+ L ++R+ KG GGHNG++SII + G + FPR+++G+G+P K + VN VL FSK++R+ ++ Sbjct: 3 LIVGLGNPGKQYEQTRHNIGFDVIDYMANKYNIDVNREKFKGICGEGFIENKKVILLKPLTYMNLSGESIRELANFYKLEDDEIIVVYDDISLDIGRLRIREKGSAGGHNGIKSIIQNLGGDK-FPRVKVGVGQP--KDNLVNHVLGKFSKEDREHIE 157
BLAST of FC873342 vs. ExPASy Swiss-Prot
Match: PTH_CLOP1 (Peptidyl-tRNA hydrolase OS=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) GN=pth PE=3 SV=1) HSP 1 Score: 154.066 bits (388), Expect = 9.316e-37 Identity = 72/158 (45.57%), Postives = 111/158 (70.25%), Query Frame = 1 Query: 148 LIVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGISVSSVNFKAHFGKGFIGNVPVMLAKPQTFMNASGQSVGSIVSYYKIPLKQVLVIFDDLDLPFSKMRLLPKGGHGGHNGMRSIIDHFKGSREFPRLRIGIGRPPGKMDSVNFVLRPFSKQERQELD 621 LIVGLGNPGKQY TRHN+GF+++D +A I V+ FK G+GFI N V+L KP T+MN SG+S+ + ++YK+ +++V++DD+ L ++R+ KG GGHNG++SII + G + FPR+++G+G+P K + VN VL FSK++R+ ++ Sbjct: 3 LIVGLGNPGKQYEQTRHNIGFDVIDYMANKYNIDVNREKFKGICGEGFIENKKVILLKPLTYMNLSGESIRELANFYKLEDDEIIVVYDDISLDIGRLRIREKGSAGGHNGIKSIIQNLGGDK-FPRVKVGVGQP--KDNLVNHVLGKFSKEDREHIE 157
BLAST of FC873342 vs. ExPASy Swiss-Prot
Match: PTH_RHOOB (Peptidyl-tRNA hydrolase OS=Rhodococcus opacus (strain B4) GN=pth PE=3 SV=1) HSP 1 Score: 153.68 bits (387), Expect = 1.217e-36 Identity = 78/180 (43.33%), Postives = 113/180 (62.78%), Query Frame = 1 Query: 148 LIVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGISVSSVNFK-AHFGKGFIGNVPVMLAKPQTFMNASGQSVGSIVSYYKIPLKQVLVIFDDLDLPFSKMRLLPKGGHGGHNGMRSIIDHFKGSREFPRLRIGIGRPPGKMDSVNFVLRPFSKQERQELDFTFQQGVEAVRILLLEGFNKA 684 L+VGLGNPG QY TRHNVGF + ++ G S+ A +G + P +LAKP++FMN SG +V + ++ + ++VI D+LDL F +RL GG GGHNG+RSI G++++ R R+GIGRPPG+MD ++VL+PFS ER+ELD ++ +AV ++L G A Sbjct: 7 LVVGLGNPGPQYEKTRHNVGFMVAGVLSARMGGKFSAHKKSGAEIVQGRLEGRPTILAKPRSFMNLSGSAVAGLARFFSVDPGNIVVIHDELDLDFGTIRLKQGGGEGGHNGLRSISQSL-GTKDYLRTRVGIGRPPGRMDPASYVLKPFSSVERKELDLVCEESADAVELVLRLGLEAA 185
BLAST of FC873342 vs. ExPASy Swiss-Prot
Match: PTH_GEOSF (Peptidyl-tRNA hydrolase OS=Geobacter sp. (strain FRC-32) GN=pth PE=3 SV=1) HSP 1 Score: 153.68 bits (387), Expect = 1.217e-36 Identity = 79/184 (42.93%), Postives = 113/184 (61.41%), Query Frame = 1 Query: 148 LIVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGISVSSVNFKAHFGKGFIGNVPVMLAKPQTFMNASGQSVGSIVSYYKIPLKQVLVIFDDLDLPFSKMRLLPKGGHGGHNGMRSIIDHFKGSREFPRLRIGIGRPPGKMDSVNFVLRPFSKQERQELDFTFQQGVEAVRILLLEGFNKAATFVN 699 +IVGLGNPG +Y TRHN GF ++D ++ GI++S F G+G ++L KPQTFMN SG+S + ++K+P++ ++VI DDLD+PF +++L GGH GHNG+RS+ GS +F R+R+GIGRP D VN+VL FS +E L V+ V +L EG K + N Sbjct: 5 IIVGLGNPGPKYQWTRHNAGFMVLDRLSHLAGIAISKKTFSGVCGEGNWQGERLILLKPQTFMNLSGRSAAEAIRFHKLPIEDLIVIHDDLDIPFGRVKLKQGGGHAGHNGLRSLAQEL-GSGDFVRVRVGIGRPV-HGDVVNYVLNNFSPEEMASLPRLLDGVVDLVEMLAREGLPKTMSLYN 186
BLAST of FC873342 vs. ExPASy Swiss-Prot
Match: PTH_MYCS2 (Peptidyl-tRNA hydrolase OS=Mycobacterium smegmatis GN=pth PE=3 SV=1) HSP 1 Score: 153.295 bits (386), Expect = 1.589e-36 Identity = 80/188 (42.55%), Postives = 115/188 (61.17%), Query Frame = 1 Query: 142 PWLIVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGISVSSVNFK--AHFGKGFIGNVPVMLAKPQTFMNASGQSVGSIVSYYKIPLKQVLVIFDDLDLPFSKMRLLPKGGHGGHNGMRSIIDHFKGSREFPRLRIGIGRPPGKMDSVNFVLRPFSKQERQELDFTFQQGVEAVRILLLEGFNKAATFVN 699 P L+VGLGNPG Y TRHN+GF + D +A G S V+ K A G + V+LAKP+ +MN SG+ VG + +Y +P +Q++VI D+LD+ F ++RL GG GGHNG+RS+ G++ F R+RIG+GRPPG+ D FVL F+ ER E+ +Q +A +L+ +G A V+ Sbjct: 4 PLLVVGLGNPGPTYAKTRHNLGFMVADVLAGRIG-SAFKVHKKSGAEVVTGRLAGTSVVLAKPRCYMNESGRQVGPLAKFYSVPPQQIVVIHDELDIDFGRIRLKLGGGEGGHNGLRSVASAL-GTKNFHRVRIGVGRPPGRKDPAAFVLENFTAAERAEVPTIVEQAADATELLIAQGLEPAQNTVH 189
BLAST of FC873342 vs. ExPASy Swiss-Prot
Match: PTH_BACA2 (Peptidyl-tRNA hydrolase OS=Bacillus amyloliquefaciens (strain FZB42) GN=pth PE=3 SV=1) HSP 1 Score: 153.295 bits (386), Expect = 1.589e-36 Identity = 77/176 (43.75%), Postives = 109/176 (61.93%), Query Frame = 1 Query: 148 LIVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGISVSSVNFKAHFGKGFIGNVPVMLAKPQTFMNASGQSVGSIVSYYKIPLKQVLVIFDDLDLPFSKMRLLPKGGHGGHNGMRSIIDHFKGSREFPRLRIGIGRPPGKMDSVNFVLRPFSKQERQELDFTFQQGVEAVRILLLEGF 675 +I GLGNPGK Y TRHNVGF +D +++ I ++ F +G GF+ V+L KP T+MN SG+ + I+ YY + + VI+DDLDLP K+RL KG GGHNG++S+I H G+ EF R+RIGIGRP M V++VL F+K+E ++ + V+A L + F Sbjct: 3 VIAGLGNPGKTYENTRHNVGFMAIDELSKEWNIELNKTKFNGLYGMGFVSGKKVLLVKPLTYMNLSGECLRPILDYYDADHEDLKVIYDDLDLPTGKIRLRTKGSAGGHNGIKSLIQHL-GTPEFDRVRIGIGRPVNGMKVVDYVLGAFTKEEAPHINDAVSKTVKACEASLTKPF 177 The following BLAST results are available for this feature:
BLAST of FC873342 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC873342 ID=FC873342; Name=FC873342; organism=Citrus clementina; type=EST; length=844bpback to top |