FC873342
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC873342 vs. ExPASy Swiss-Prot
Match: PTH_STRSY (Peptidyl-tRNA hydrolase OS=Streptococcus suis (strain 05ZYH33) GN=pth PE=3 SV=1) HSP 1 Score: 152.91 bits (385), Expect = 2.075e-36 Identity = 78/175 (44.57%), Postives = 113/175 (64.57%), Query Frame = 1 Query: 148 LIVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGISVSSVN-FKAHFGKGFIGNVPVMLAKPQTFMNASGQSVGSIVSYYKIPLKQVLVIFDDLDLPFSKMRLLPKGGHGGHNGMRSIIDHFKGSREFPRLRIGIGRPPGKMDSVNFVLRPFSKQERQELDFTFQQGVEAVRILLLE 669 LI+GLGNPG +Y T+HNVGF ++D IA+ E ++ + F+A FI + L KP TFMN SG++V ++++YY + +LV +DDLD+ K+R KG GGHNG++SI+ H G++EF R++IGIGRP GKM VN VL F ++R E+D + +AV + L E Sbjct: 4 LIIGLGNPGDRYFETKHNVGFMLLDKIAKRENVTFNHDKIFQADIATTFIDGEKIYLVKPTTFMNESGKAVHALMTYYGLDATDILVAYDDLDMAVGKIRFRQKGSAGGHNGIKSIVKHI-GTQEFDRIKIGIGRPKGKMSVVNHVLSGFDIEDRIEIDLALDKLDKAVNVYLEE 177
BLAST of FC873342 vs. ExPASy Swiss-Prot
Match: PTH_STRS2 (Peptidyl-tRNA hydrolase OS=Streptococcus suis (strain 98HAH33) GN=pth PE=3 SV=1) HSP 1 Score: 152.91 bits (385), Expect = 2.075e-36 Identity = 78/175 (44.57%), Postives = 113/175 (64.57%), Query Frame = 1 Query: 148 LIVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGISVSSVN-FKAHFGKGFIGNVPVMLAKPQTFMNASGQSVGSIVSYYKIPLKQVLVIFDDLDLPFSKMRLLPKGGHGGHNGMRSIIDHFKGSREFPRLRIGIGRPPGKMDSVNFVLRPFSKQERQELDFTFQQGVEAVRILLLE 669 LI+GLGNPG +Y T+HNVGF ++D IA+ E ++ + F+A FI + L KP TFMN SG++V ++++YY + +LV +DDLD+ K+R KG GGHNG++SI+ H G++EF R++IGIGRP GKM VN VL F ++R E+D + +AV + L E Sbjct: 4 LIIGLGNPGDRYFETKHNVGFMLLDKIAKRENVTFNHDKIFQADIATTFIDGEKIYLVKPTTFMNESGKAVHALMTYYGLDATDILVAYDDLDMAVGKIRFRQKGSAGGHNGIKSIVKHI-GTQEFDRIKIGIGRPKGKMSVVNHVLSGFDIEDRIEIDLALDKLDKAVNVYLEE 177
BLAST of FC873342 vs. ExPASy Swiss-Prot
Match: PTH_RHOSR (Peptidyl-tRNA hydrolase OS=Rhodococcus sp. (strain RHA1) GN=pth PE=3 SV=1) HSP 1 Score: 152.91 bits (385), Expect = 2.075e-36 Identity = 78/180 (43.33%), Postives = 112/180 (62.22%), Query Frame = 1 Query: 148 LIVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGISVSSVNFK-AHFGKGFIGNVPVMLAKPQTFMNASGQSVGSIVSYYKIPLKQVLVIFDDLDLPFSKMRLLPKGGHGGHNGMRSIIDHFKGSREFPRLRIGIGRPPGKMDSVNFVLRPFSKQERQELDFTFQQGVEAVRILLLEGFNKA 684 L+VGLGNPG QY TRHNVGF + ++ G S+ A +G P +LAKP++FMN SG +V + ++ + ++VI D+LDL F +RL GG GGHNG+RSI G++++ R R+GIGRPPG+MD ++VL+PFS ER+ELD ++ +AV ++L G A Sbjct: 7 LVVGLGNPGPQYEKTRHNVGFMVAGVLSARMGGKFSAHKKSGAEIVQGRFEGRPTILAKPRSFMNLSGSAVAGLARFFSVDPGNIVVIHDELDLDFGTIRLKQGGGEGGHNGLRSISSAL-GTKDYLRTRVGIGRPPGRMDPASYVLKPFSSVERKELDLVCEESADAVELVLRVGLEAA 185
BLAST of FC873342 vs. ExPASy Swiss-Prot
Match: PTH_BACHD (Peptidyl-tRNA hydrolase OS=Bacillus halodurans GN=pth PE=3 SV=1) HSP 1 Score: 152.91 bits (385), Expect = 2.075e-36 Identity = 77/176 (43.75%), Postives = 106/176 (60.23%), Query Frame = 1 Query: 148 LIVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGISVSSVNFKAHFGKGFIGNVPVMLAKPQTFMNASGQSVGSIVSYYKIPLKQVLVIFDDLDLPFSKMRLLPKGGHGGHNGMRSIIDHFKGSREFPRLRIGIGRPPGKMDSVNFVLRPFSKQERQELDFTFQQGVEAVRILLLEGF 675 LIVGLGNPG +Y+GTRHNVGF++VDA+A I + +G+G I + L KPQTFMN SG+SV + YY + ++ +LVI+DDLDLP K+RL KG GGHNGM+S+I H G+ +F R+R+G+ RP V VL + +E+ + EA + F Sbjct: 3 LIVGLGNPGAKYDGTRHNVGFDVVDAVARRLNIEIKQSKANGLYGEGRIDGEKIFLLKPQTFMNRSGESVRPFLEYYNMEVEDLLVIYDDLDLPVGKIRLRQKGSAGGHNGMKSLIAHL-GTSDFKRIRVGVDRPAPGETVVQHVLGRYRPEEKDAISEAIDLSAEAAEAFTKKPF 177
BLAST of FC873342 vs. ExPASy Swiss-Prot
Match: PTH_OCEIH (Peptidyl-tRNA hydrolase OS=Oceanobacillus iheyensis GN=pth PE=3 SV=1) HSP 1 Score: 152.525 bits (384), Expect = 2.711e-36 Identity = 70/168 (41.67%), Postives = 111/168 (66.07%), Query Frame = 1 Query: 148 LIVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGISVSSVNFKAHFGKGFIGNVPVMLAKPQTFMNASGQSVGSIVSYYKIPLKQVLVIFDDLDLPFSKMRLLPKGGHGGHNGMRSIIDHFKGSREFPRLRIGIGRPPGKMDSVNFVLRPFSKQERQELDFTFQQGVEAV 651 LIVGLGNPG+++ TRHN+GF ++D + + +++ F+ + V+L +PQT+MN SG+S+ ++ Y+ I + V+V++DDLDLP K+RL KGGHGGHNG+RS IDH G+++F R+R+GIGRP +++VL F KQE + + ++ +A+ Sbjct: 3 LIVGLGNPGRKFKKTRHNIGFFVIDELLQRHKWKLNNSKFEGDYSIEHFDGEKVILLQPQTYMNLSGKSISPLMDYFDIDVDDVIVVYDDLDLPTGKIRLRQKGGHGGHNGVRSTIDHL-GTKDFKRVRLGIGRPTNATPVIDYVLGKFPKQETTAVTDSVEKAADAI 169
BLAST of FC873342 vs. ExPASy Swiss-Prot
Match: PTH_CLOB8 (Peptidyl-tRNA hydrolase OS=Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) GN=pth PE=3 SV=1) HSP 1 Score: 152.525 bits (384), Expect = 2.711e-36 Identity = 78/188 (41.49%), Postives = 114/188 (60.64%), Query Frame = 1 Query: 145 WLIVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGISVSSVNFKAHFGKGFIGNVPVMLAKPQTFMNASGQSVGSIVSYYKIPLKQVLVIFDDLDLPFSKMRLLPKGGHGGHNGMRSIIDHFKGSREFPRLRIGIGRPPGKMDSVNFVLRPFSKQERQELDFTFQQGVEAVRILLLEGFNKAATFVNTAK 708 +LIVGLGNPG +Y TRHN+GF+++D IA+ I ++ FK +G+GFI VML KP T+MN SG+SV +V +Y + ++LVI+DD+ L K+R+ KG GGHNG++SII H S F R+++G+G+P G D V VL F+K+E L + + +A ++ A N K Sbjct: 2 FLIVGLGNPGNEYENTRHNIGFKVIDNIAKEYNIEINRQKFKGMYGEGFINGKKVMLLKPTTYMNLSGESVREVVDFYNLNNDEILVIYDDISLEVGKLRIREKGSAGGHNGIKSIIAHL-NSEIFSRIKVGVGQPNG--DLVKHVLGKFTKEETAILSESIEASTKAAAEIIKNDVKTAMNQFNGFK 186
BLAST of FC873342 vs. ExPASy Swiss-Prot
Match: PTH_BACLD (Peptidyl-tRNA hydrolase OS=Bacillus licheniformis (strain DSM 13 / ATCC 14580) GN=pth PE=3 SV=1) HSP 1 Score: 152.525 bits (384), Expect = 2.711e-36 Identity = 75/176 (42.61%), Postives = 107/176 (60.80%), Query Frame = 1 Query: 148 LIVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGISVSSVNFKAHFGKGFIGNVPVMLAKPQTFMNASGQSVGSIVSYYKIPLKQVLVIFDDLDLPFSKMRLLPKGGHGGHNGMRSIIDHFKGSREFPRLRIGIGRPPGKMDSVNFVLRPFSKQERQELDFTFQQGVEAVRILLLEGF 675 + GLGNPGK Y TRHNVGF +D +++ I + F +G GF+ V+L KP T+MN SG+ + ++ YY+IP+ + VI+DDLDLP ++RL KG GGHNG++S I H G+ EF R+RIGIGRP M V++VL F+ +E + +Q +A L + F Sbjct: 3 VFAGLGNPGKTYENTRHNVGFMTIDELSKEWNIPLDKTKFNGQYGIGFVSGKKVLLVKPLTYMNLSGECLRPLLDYYEIPVDNLKVIYDDLDLPTGRIRLRTKGSAGGHNGIKSTIQHL-GTSEFNRIRIGIGRPVNGMKVVDYVLGAFTDEEEPAIKEAVRQSAKACEASLEKPF 177
BLAST of FC873342 vs. ExPASy Swiss-Prot
Match: PTH_AQUAE (Peptidyl-tRNA hydrolase OS=Aquifex aeolicus GN=pth PE=3 SV=1) HSP 1 Score: 152.525 bits (384), Expect = 2.711e-36 Identity = 78/168 (46.43%), Postives = 108/168 (64.29%), Query Frame = 1 Query: 148 LIVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGISVSSVNFKAHFGKGFIGNVPVMLAKPQTFMNASGQSVGSIVSYYKIPLKQVLVIFDDLDLPFSKMRLLPKGGHGGHNGMRSIIDHFKGSREFPRLRIGIGRPPGKMDSVNFVLRPFSKQERQELDFTFQQGVEAV 651 L+VGLGNPGK+Y TRHNVGF ++D + +A +H K IG V+LAKP T+MN SG +V +++ YK+ +Q++V++DDLDLP MRL KG GGH G+ SII + G++ FPRLRIGIGRP K D V +VL PFS +E + + ++ V + Sbjct: 5 LVVGLGNPGKEYEKTRHNVGFMVIDELVKALRAKGPFEEALSHVYKARIGGKEVILAKPMTYMNNSGAAVYNLLEEYKLSPEQMIVVYDDLDLPLGHMRLRLKGSSGGHRGVESIIKYI-GTQNFPRLRIGIGRPKKKEDVVKYVLSPFSPEEEKVISQVIKKAVRCL 171
BLAST of FC873342 vs. ExPASy Swiss-Prot
Match: PTH_STRA1 (Peptidyl-tRNA hydrolase OS=Streptococcus agalactiae serotype Ia GN=pth PE=3 SV=1) HSP 1 Score: 152.14 bits (383), Expect = 3.540e-36 Identity = 75/173 (43.35%), Postives = 110/173 (63.58%), Query Frame = 1 Query: 148 LIVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGISVSS-VNFKAHFGKGFIGNVPVMLAKPQTFMNASGQSVGSIVSYYKIPLKQVLVIFDDLDLPFSKMRLLPKGGHGGHNGMRSIIDHFKGSREFPRLRIGIGRPPGKMDSVNFVLRPFSKQERQELDFTFQQGVEAVRILL 663 +IVGLGNPG +YN T+HN+GF +D I + ++ + NFKA G FI + KP TFMN SG +V ++++YY I +K +++I+DDLD+ K+R KG GGHNG++SII H G++EF R+++GIGRP G+M +N VL F K + + T + AV+ L Sbjct: 4 MIVGLGNPGSKYNDTKHNIGFMAIDRIVKNLDVNFTEDKNFKAEIGSDFINGEKIYFIKPTTFMNNSGIAVKALLTYYNISIKDMIIIYDDLDMEVGKIRFRQKGSAGGHNGIKSIIAHL-GTQEFDRIKVGIGRPNGRMTVINHVLGKFDKNDEIMISNTLDKVDNAVKYYL 175
BLAST of FC873342 vs. ExPASy Swiss-Prot
Match: PTH_MYCPA (Peptidyl-tRNA hydrolase OS=Mycobacterium paratuberculosis GN=pth PE=3 SV=1) HSP 1 Score: 152.14 bits (383), Expect = 3.540e-36 Identity = 82/192 (42.71%), Postives = 113/192 (58.85%), Query Frame = 1 Query: 142 PWLIVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGISVSSVNFKAH------FGKGFIGNVPVMLAKPQTFMNASGQSVGSIVSYYKIPLKQVLVIFDDLDLPFSKMRLLPKGGHGGHNGMRSIIDHFKGSREFPRLRIGIGRPPGKMDSVNFVLRPFSKQERQELDFTFQQGVEAVRILLLEGFNKAATFVN 699 P L+VGLGNPG Y TRHNVGF + D +A G FKAH G + V++AKP+ +MN SG+ VG + +Y +P ++VI DDLDL F ++RL GG GGHNG+RS+ + GS++F R+RIGIGRPPG+ D FVL F+ ER ++ +Q +A +L+ G A V+ Sbjct: 4 PLLVVGLGNPGDNYARTRHNVGFMVADLLAARMGSK-----FKAHKRSGAEIVSGRLAGRSVVVAKPRCYMNESGRQVGPLAKFYSVPPGDIIVIHDDLDLDFGRIRLKIGGGEGGHNGLRSVANAL-GSKDFQRVRIGIGRPPGRKDPAAFVLENFTSTERADVPTICEQAADATELLIELGLEPAQNRVH 189 The following BLAST results are available for this feature:
BLAST of FC873342 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC873342 ID=FC873342; Name=FC873342; organism=Citrus clementina; type=EST; length=844bpback to top |