FC873342
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC873342 vs. ExPASy Swiss-Prot
Match: PTH_DICNV (Peptidyl-tRNA hydrolase OS=Dichelobacter nodosus (strain VCS1703A) GN=pth PE=3 SV=1) HSP 1 Score: 152.14 bits (383), Expect = 3.540e-36 Identity = 81/186 (43.55%), Postives = 117/186 (62.90%), Query Frame = 1 Query: 148 LIVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGISV-SSVNFKAHFGKGFIGNVPVMLAKPQTFMNASGQSVGSIVSYYKIPLKQVLVIFDDLDLPFSKMRLLPKGGHGGHNGMRSIIDHFKGSREFPRLRIGIGRPPGKMDSVNFVLRPFSKQERQELDFTFQQGVEAVRILLLEGFNKAATFVNT 702 LIVGLGNPG+QY TRHN GF ++D A+ + + F A FG+ I + L KPQTFMNASG+S+ ++ +Y I +Q+L+I D+LDLP K++L GGHGGHNG+R II S++F RLRIGIGRP +++VL+ S + L+ + G +A+ L+ EG KA ++++ Sbjct: 4 LIVGLGNPGEQYQKTRHNAGFWLLDQTAQDYSCRLRTEKKFFAEFGEIAINQQKIFLLKPQTFMNASGKSLAAVCRFYHIEPQQILIIHDELDLPEGKIKLKKSGGHGGHNGLRDIIAAL-ASQDFYRLRIGIGRPENSTQVIDYVLKAPSATHMERLNESLSYGKKAIEKLITEGDEKAMHWLHS 188
BLAST of FC873342 vs. ExPASy Swiss-Prot
Match: PTH_MYCSS (Peptidyl-tRNA hydrolase OS=Mycobacterium sp. (strain MCS) GN=pth PE=3 SV=1) HSP 1 Score: 151.754 bits (382), Expect = 4.624e-36 Identity = 78/192 (40.62%), Postives = 115/192 (59.90%), Query Frame = 1 Query: 142 PWLIVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGISVSSVNFKAH------FGKGFIGNVPVMLAKPQTFMNASGQSVGSIVSYYKIPLKQVLVIFDDLDLPFSKMRLLPKGGHGGHNGMRSIIDHFKGSREFPRLRIGIGRPPGKMDSVNFVLRPFSKQERQELDFTFQQGVEAVRILLLEGFNKAATFVN 699 P L+VGLGNPG Y TRHNVGF + D +A G FKAH G + V+LAKP+T+MN SG++VG + +Y + V+VI D+LD+ F ++RL GG GHNG++S+ G+++F R+R+G+GRPPG+ D+ +VL PF+ ER E+ +Q +A +L+ +G A V+ Sbjct: 4 PLLVVGLGNPGPNYAKTRHNVGFVVADLLAGRIGSG-----FKAHRKSGADIATGRLAGRAVVLAKPRTYMNESGRNVGPLAKFYSVAPADVIVIHDELDIDFGRIRLKFGGGVAGHNGLKSVAAAL-GTKDFQRVRVGVGRPPGRKDAATYVLEPFTSVERPEVPTICEQAADATELLIAQGLEPAQNLVH 189
BLAST of FC873342 vs. ExPASy Swiss-Prot
Match: PTH_MYCSK (Peptidyl-tRNA hydrolase OS=Mycobacterium sp. (strain KMS) GN=pth PE=3 SV=1) HSP 1 Score: 151.754 bits (382), Expect = 4.624e-36 Identity = 78/192 (40.62%), Postives = 115/192 (59.90%), Query Frame = 1 Query: 142 PWLIVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGISVSSVNFKAH------FGKGFIGNVPVMLAKPQTFMNASGQSVGSIVSYYKIPLKQVLVIFDDLDLPFSKMRLLPKGGHGGHNGMRSIIDHFKGSREFPRLRIGIGRPPGKMDSVNFVLRPFSKQERQELDFTFQQGVEAVRILLLEGFNKAATFVN 699 P L+VGLGNPG Y TRHNVGF + D +A G FKAH G + V+LAKP+T+MN SG++VG + +Y + V+VI D+LD+ F ++RL GG GHNG++S+ G+++F R+R+G+GRPPG+ D+ +VL PF+ ER E+ +Q +A +L+ +G A V+ Sbjct: 4 PLLVVGLGNPGPNYAKTRHNVGFVVADLLAGRIGSG-----FKAHRKSGADIATGRLAGRAVVLAKPRTYMNESGRNVGPLAKFYSVAPADVIVIHDELDIDFGRIRLKFGGGVAGHNGLKSVAAAL-GTKDFQRVRVGVGRPPGRKDAATYVLEPFTSVERPEVPTICEQAADATELLIAQGLEPAQNLVH 189
BLAST of FC873342 vs. ExPASy Swiss-Prot
Match: PTH_MYCSJ (Peptidyl-tRNA hydrolase OS=Mycobacterium sp. (strain JLS) GN=pth PE=3 SV=1) HSP 1 Score: 151.754 bits (382), Expect = 4.624e-36 Identity = 78/192 (40.62%), Postives = 115/192 (59.90%), Query Frame = 1 Query: 142 PWLIVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGISVSSVNFKAH------FGKGFIGNVPVMLAKPQTFMNASGQSVGSIVSYYKIPLKQVLVIFDDLDLPFSKMRLLPKGGHGGHNGMRSIIDHFKGSREFPRLRIGIGRPPGKMDSVNFVLRPFSKQERQELDFTFQQGVEAVRILLLEGFNKAATFVN 699 P L+VGLGNPG Y TRHNVGF + D +A G FKAH G + V+LAKP+T+MN SG++VG + +Y + V+VI D+LD+ F ++RL GG GHNG++S+ G+++F R+R+G+GRPPG+ D+ +VL PF+ ER E+ +Q +A +L+ +G A V+ Sbjct: 4 PLLVVGLGNPGPNYAKTRHNVGFVVADLLAGRIGSG-----FKAHRKSGADIATGRLAGRAVVLAKPRTYMNESGRNVGPLAKFYSVAPADVIVIHDELDIDFGRIRLKFGGGVAGHNGLKSVAAAL-GTKDFQRVRVGVGRPPGRKDAATYVLEPFTSVERPEVPTICEQAADATELLIAQGLEPAQNLVH 189
BLAST of FC873342 vs. ExPASy Swiss-Prot
Match: PTH_MYCA1 (Peptidyl-tRNA hydrolase OS=Mycobacterium avium (strain 104) GN=pth PE=3 SV=1) HSP 1 Score: 151.754 bits (382), Expect = 4.624e-36 Identity = 82/192 (42.71%), Postives = 113/192 (58.85%), Query Frame = 1 Query: 142 PWLIVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGISVSSVNFKAH------FGKGFIGNVPVMLAKPQTFMNASGQSVGSIVSYYKIPLKQVLVIFDDLDLPFSKMRLLPKGGHGGHNGMRSIIDHFKGSREFPRLRIGIGRPPGKMDSVNFVLRPFSKQERQELDFTFQQGVEAVRILLLEGFNKAATFVN 699 P L+VGLGNPG Y TRHNVGF + D +A G FKAH G + V++AKP+ +MN SG+ VG + +Y +P ++VI DDLDL F ++RL GG GGHNG+RS + + GS++F R+RIGIGRPPG+ D FVL F+ ER ++ +Q +A +L+ G A V+ Sbjct: 4 PLLVVGLGNPGDNYARTRHNVGFMVADLLAARMGSK-----FKAHKRSGAEIVSGRLAGRSVVVAKPRCYMNESGRQVGPLAKFYSVPPGDIIVIHDDLDLDFGRIRLKIGGGEGGHNGLRS-VSNALGSKDFQRVRIGIGRPPGRKDPAAFVLENFTSTERADVPTICEQAADATELLIELGLEPAQNRVH 189
BLAST of FC873342 vs. ExPASy Swiss-Prot
Match: PTH_ARTS2 (Peptidyl-tRNA hydrolase OS=Arthrobacter sp. (strain FB24) GN=pth PE=3 SV=1) HSP 1 Score: 151.369 bits (381), Expect = 6.039e-36 Identity = 76/189 (40.21%), Postives = 118/189 (62.43%), Query Frame = 1 Query: 145 WLIVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGISVSSVNFKAHF--GKGFIGNVPVMLAKPQTFMNASGQSVGSIVSYYKIPLKQVLVIFDDLDLPFSKMRLLPKGGHGGHNGMRSIIDHFKGSREFPRLRIGIGRPPGKMDSVNFVLRPFSKQERQELDFTFQQGVEAVRILLLEGFNKAATFVNTA 705 WLIVGLGNPG +Y+ RHNVG ++D +A G S +AH G+ IG V+LAKP ++MN SG V ++ +Y I + V+ + D++D+PF+ ++L GG GGHNG+R I ++++ R+R+G+GRPPG+MD+ +FVL+ F+ E+++L F +AV ++ EG A +TA Sbjct: 5 WLIVGLGNPGTEYSNNRHNVGQMVLDELARRVGGSFKVHKARAHVLEGRLGIGGPRVVLAKPMSYMNVSGGPVSALSKFYDIDPEHVVAVHDEIDIPFNTVKLKIGGGEGGHNGLRD-ISKALATKDYLRVRVGVGRPPGRMDTADFVLKDFATTEKKDLPFLLDDAADAVETVVREGLAAAQQKYHTA 192
BLAST of FC873342 vs. ExPASy Swiss-Prot
Match: PTH_AGRRK (Peptidyl-tRNA hydrolase OS=Agrobacterium radiobacter (strain K84 / ATCC BAA-868) GN=pth PE=3 SV=1) HSP 1 Score: 151.369 bits (381), Expect = 6.039e-36 Identity = 80/161 (49.69%), Postives = 103/161 (63.98%), Query Frame = 1 Query: 148 LIVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGISVSSVNFKAHFGKGFIGNVPVMLAKPQTFMNASGQSVGSIVSYYKIPLKQVLVIFDDLDLPFSKMRLLPKGGHGGHNGMRSIIDHFKGSREFPRLRIGIGRPPGKMDSVNFVLRPFSKQERQELDFTF 630 LIVGLGNPG +Y G RHN+GF VDAI S + F+A +G +G V+L KPQTFMN SG+SVG + +YK+ ++VI+D+LDLP +K RL GGHGGHNG++SI H RE+ RLR+GIG P K N VL F+K +R L+ F Sbjct: 3 LIVGLGNPGAKYQGNRHNIGFMAVDAIHRRHSFSPWAKKFRAEISEGELGGQKVLLIKPQTFMNLSGESVGEAMRFYKLEPSDLVVIYDELDLPAAKARLKTGGGHGGHNGIKSIDAHC--GREYRRLRLGIGHPGVKELVQNHVLGDFAKVDRDWLEPLF 161
BLAST of FC873342 vs. ExPASy Swiss-Prot
Match: PTH_MACCJ (Peptidyl-tRNA hydrolase OS=Macrococcus caseolyticus (strain JCSC5402) GN=pth PE=3 SV=1) HSP 1 Score: 150.984 bits (380), Expect = 7.887e-36 Identity = 72/171 (42.11%), Postives = 111/171 (64.91%), Query Frame = 1 Query: 151 IVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGISVSSVNFKAHFGKGFIGNVPVMLAKPQTFMNASGQSVGSIVSYYKIPLKQVLVIFDDLDLPFSKMRLLPKGGHGGHNGMRSIIDHFKGSREFPRLRIGIGRPPGKMDSVNFVLRPFSKQERQELDFTFQQGVEAVRILL 663 IVGLGN GK+Y TRHN+GF +VD + E+ + ++ FK + I V+L +P T+MN+SG++V ++ Y+ + + +LV++DDLD+P ++RL KG GGHNG+RS+I H G+ +F R+RIGIGRP G + V+FVL+ F+ E +D Q ++AV + Sbjct: 4 IVGLGNIGKKYELTRHNIGFMVVDRLVESYNLELNQQKFKGLYAIAMINGEKVLLIEPMTYMNSSGEAVRPLMDYFNVSTEDLLVLYDDLDMPPGRLRLRQKGSAGGHNGIRSLIQHL-GTDQFKRIRIGIGRPTGHLKVVDFVLQKFTPDEMIVMDKVINQTIKAVEAFI 173
BLAST of FC873342 vs. ExPASy Swiss-Prot
Match: PTH_DESHY (Peptidyl-tRNA hydrolase OS=Desulfitobacterium hafniense (strain Y51) GN=pth PE=3 SV=2) HSP 1 Score: 150.984 bits (380), Expect = 7.887e-36 Identity = 78/184 (42.39%), Postives = 111/184 (60.33%), Query Frame = 1 Query: 148 LIVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGISVSSVNFKAHFGKGFIGNVPVMLAKPQTFMNASGQSVGSIVSYYKIPLKQVLVIFDDLDLPFSKMRLLPKGGHGGHNGMRSIIDHFKGSREFPRLRIGIGRPPGKMDSVNFVLRPFSKQERQELDFTFQQGVEAVRILLLEGFNKAATFVN 699 LI GLGNPG QY TRHN GF ++D +AE + F+ + +G V L KPQTFMN SG+S+ + +YKI K ++V++DD+DLP ++RL G GGHNG++S I G+ +F RL++GIGRP DS +VL F+K+E L+ +G++AV + EG +KA N Sbjct: 3 LIAGLGNPGGQYAETRHNAGFLLLDCLAEELKLDFRP-KFQGLVAETMMGGEKVYLLKPQTFMNLSGRSIRELAQFYKIAPKDIMVVYDDMDLPIGRLRLRSSGSAGGHNGIKSTIAEL-GTEDFWRLKVGIGRPTAGWDSARYVLASFTKEELPVLEEILDKGIKAVTLWAKEGGDKAMNLYN 184
BLAST of FC873342 vs. ExPASy Swiss-Prot
Match: PTH_DESHD (Peptidyl-tRNA hydrolase OS=Desulfitobacterium hafniense (strain DCB-2 / DSM 10664) GN=pth PE=3 SV=1) HSP 1 Score: 150.984 bits (380), Expect = 7.887e-36 Identity = 78/184 (42.39%), Postives = 111/184 (60.33%), Query Frame = 1 Query: 148 LIVGLGNPGKQYNGTRHNVGFEMVDAIAEAEGISVSSVNFKAHFGKGFIGNVPVMLAKPQTFMNASGQSVGSIVSYYKIPLKQVLVIFDDLDLPFSKMRLLPKGGHGGHNGMRSIIDHFKGSREFPRLRIGIGRPPGKMDSVNFVLRPFSKQERQELDFTFQQGVEAVRILLLEGFNKAATFVN 699 LI GLGNPG QY TRHN GF ++D +AE + F+ + +G V L KPQTFMN SG+S+ + +YKI K ++V++DD+DLP ++RL G GGHNG++S I G+ +F RL++GIGRP DS +VL F+K+E L+ +G++AV + EG +KA N Sbjct: 3 LIAGLGNPGGQYAETRHNAGFLLLDCLAEELKLDFRP-KFQGLVAETMMGGEKVYLLKPQTFMNLSGRSIRELAQFYKIAPKDIMVVYDDMDLPIGRLRLRSSGSAGGHNGIKSTIAEL-GTEDFWRLKVGIGRPTAGWDSARYVLASFTKEELPVLEEILDKGIKAVTLWAKEGGDKAMNLYN 184 The following BLAST results are available for this feature:
BLAST of FC873342 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC873342 ID=FC873342; Name=FC873342; organism=Citrus clementina; type=EST; length=844bpback to top |