FC873515
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC873515 vs. ExPASy Swiss-Prot
Match: FBPC_PSEPF (Fe(3+) ions import ATP-binding protein fbpC OS=Pseudomonas fluorescens (strain Pf0-1) GN=fbpC PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 6.547e-11 Identity = 65/243 (26.75%), Postives = 106/243 (43.62%), Query Frame = 3 Query: 21 MNENEKLNSVKVCGMQFSYEGNDKPPLFYDFNLGISPGSRCLLVGANGSGKTTLLKILAGKH-------MVGGRDVVQVLNRSSFHDTQLVCSGDLSYLGGSWSKTVGSAGEIPLQGDFS-----AEHMIFGVEGSDPVRRERLIELLD-----IDLQWRM-HKVSDGQRRRVQICMGLLHPFKVLLLDEITVDLDVVARMDLLDFFKDECEQRGATIVYATHIFDGLETWATHLAYIQDGEL 695 MN + +N K G Q + + NL + GSR ++VG +GSGKTTLL+++AG M+ G+ +V + + Q+ G +P G A+++ FG+ + R ER+ L+D D+ R H++S GQ++RV + L +++LLDE LD R + E+ G T + TH ++A LA ++DG L Sbjct: 1 MNALDIINLSKSFGAQTALDS---------INLSVPTGSRTVIVGPSGSGKTTLLRMIAGFEFPDAGSLMLNGQTLVDRTHAVPAYQRQI--------------------GYVPQDGALFPHMTVADNIGFGLAETGSARAERIQALMDNVALNADMATRWPHELSGGQQQRVSLARALAQRPRLMLLDEPFSALDTGLRGAMRKMVARLLEEAGVTTILVTHDQGEALSFADQLAVMRDGRL 214
BLAST of FC873515 vs. ExPASy Swiss-Prot
Match: CBIO1_STRP3 (Cobalt import ATP-binding protein cbiO 1 OS=Streptococcus pyogenes serotype M3 GN=cbiO1 PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 6.547e-11 Identity = 57/205 (27.80%), Postives = 98/205 (47.80%), Query Frame = 3 Query: 105 YDFNLGISPGSRCLLVGANGSGKTTLLKILAGKHM----VGGRDVVQVLNRSSFHDTQLVCSGDLSYLGGSWSKTVGSAGEIPLQGDFSAEHMIFGV--EGSDPVRRERL--IELLDIDLQWRMHKVSDGQRRRVQICMGLLHPFKVLLLDEITVDLDVVARMDLLDFFKDECEQRGATIVYATHIFDGLETWATHLAYIQDGEL 695 ++ NL I GS +G GSGK+T++++L G H+ + D + N S + + + ++G + E + D + FG+ E ++ + RE+L + + + + ++S GQ RRV I L KVL+LDE T LD R +L+ FK + Q G TIV TH+ D + +A + + G++ Sbjct: 24 FNINLDILDGSYTAFIGHTGSGKSTIMQLLNGLHVPTTGIVSVDKQDITNHSKNKEIKSI----RKHVGLVFQFPESQLFEETVLKDVAFGPQNFGISPEEAEALAREKLALVGISENLFEKNPFELSGGQMRRVAIAGILAMQPKVLVLDEPTAGLDPKGRKELMTIFK-KLHQSGMTIVLVTHLMDDVANYADFVYVLDKGKI 223
BLAST of FC873515 vs. ExPASy Swiss-Prot
Match: YHCH_BACSU (Uncharacterized ABC transporter ATP-binding protein yhcH OS=Bacillus subtilis GN=yhcH PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 8.551e-11 Identity = 54/224 (24.11%), Postives = 99/224 (44.20%), Query Frame = 3 Query: 108 DFNLGISPGSRCLLVGANGSGKTTLLKILAGKHMVGGRDVVQVLNRSSFHDTQLVCSGDLSYLGGSWSKTVGSAGEIP-----LQGDFSAEHMIFGVEGSDPVRRERLIELLDID--LQWRMHKVSDGQRRRVQICMGLLHPFKVLLLDEITVDLDVVARMDLLDFFKDECEQRGATIVYATHIFDGLETWATHLAYIQDGELRRAEKLAELDELRNSTNLLSV 758 D + I G +G NG+GKTT ++++ G + DV L+C ++ K +G+ E P L G + + V+G + + ++EL+ + + ++ S G R+R+ + LLH KVL+LDE T LD ++ D K +RG ++ ++H+ +E +A +Q G+L + + + + N T V Sbjct: 22 DLSFTIREGEVFGFLGPNGAGKTTTIRMMVGLMKLSKGDV-------------LICGQSITKEYAKAIKHIGAIVENPELYKFLSGYKNLQQFARMVKGVTKEKIDEVVELVGLTDRIHDKVKTYSLGMRQRLGLAQCLLHDPKVLILDEPTNGLDPAGIREIRDHLKKLTRERGMAVIVSSHLLSEMELMCDRIAILQKGKLIDIQNVKDENIDENDTYFFQV 232 The following BLAST results are available for this feature:
BLAST of FC873515 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 23
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC873515 ID=FC873515; Name=FC873515; organism=Citrus clementina; type=EST; length=828bpback to top |