FC873515
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC873515 vs. ExPASy Swiss-Prot
Match: AB19I_ARATH (ABC transporter I family member 19 OS=Arabidopsis thaliana GN=ABCI19 PE=2 SV=1) HSP 1 Score: 434.106 bits (1115), Expect = 4.542e-121 Identity = 213/262 (81.30%), Postives = 242/262 (92.37%), Query Frame = 3 Query: 42 NSVKVCGMQFSYEGNDKPPLFYDFNLGISPGSRCLLVGANGSGKTTLLKILAGKHMVGGRDVVQVLNRSSFHDTQLVCSGDLSYLGGSWSKTVGSAGEIPLQGDFSAEHMIFGVEGSDPVRRERLIELLDIDLQWRMHKVSDGQRRRVQICMGLLHPFKVLLLDEITVDLDVVARMDLLDFFKDECEQRGATIVYATHIFDGLETWATHLAYIQDGELRRAEKLAELDELRNSTNLLSVVESCLRSETKL--EKKRPVDPPK 821 ++++V GMQF+YE D P+F+DFNL + GSRCLLVGANGSGKTTLLKILAGKHMVGG++VVQVL+RS+FHDTQLVCSGDLSYLGGSWSKTVGSAGE+PLQGDFSAEHMIFGVEG+DPVRRE+LI+LLDI+LQWRMHKVSDGQ+RRVQICMGLLHPFKVLLLDE+TVDLDVVARMDLL+FFK+EC+QRGATIVYATHIFDGLETWATHLAYIQDGEL R K+ +++EL+ S NLLSVVES LRSE KL +KK+PV P K Sbjct: 12 DAIRVSGMQFAYEVED--PIFFDFNLDLPAGSRCLLVGANGSGKTTLLKILAGKHMVGGKNVVQVLSRSAFHDTQLVCSGDLSYLGGSWSKTVGSAGEVPLQGDFSAEHMIFGVEGTDPVRREKLIDLLDINLQWRMHKVSDGQKRRVQICMGLLHPFKVLLLDEVTVDLDVVARMDLLEFFKEECDQRGATIVYATHIFDGLETWATHLAYIQDGELNRLSKMTDIEELKTSPNLLSVVESWLRSEIKLVKKKKKPVAPWK 271
BLAST of FC873515 vs. ExPASy Swiss-Prot
Match: AB21I_ARATH (ABC transporter I family member 21 OS=Arabidopsis thaliana GN=ABCI21 PE=2 SV=1) HSP 1 Score: 420.624 bits (1080), Expect = 5.197e-117 Identity = 206/257 (80.16%), Postives = 233/257 (90.66%), Query Frame = 3 Query: 45 SVKVCGMQFSYEGNDKPPLFYDFNLGISPGSRCLLVGANGSGKTTLLKILAGKHMVGGRDVVQVLNRSSFHDTQLVCSGDLSYLGGSWSKTVGSAGEIPLQGDFSAEHMIFGVEGSDPVRRERLIELLDIDLQWRMHKVSDGQRRRVQICMGLLHPFKVLLLDEITVDLDVVARMDLLDFFKDECEQRGATIVYATHIFDGLETWATHLAYIQDGELRRAEKLAELDELRNSTNLLSVVESCLRSETKLEKKRPVDP 815 +++V GMQFSY+ D P+F+DFNL + GSRCLLVGANGSGKTTLLKILAGKHMVGG++VVQVL+RS+FHDT+LVCSGDLSYLGGSWSKT GSAG+IPLQGDFSAEHMIFGVEG DP RRE+LI+LLDI+LQWRMHKVSDGQRRRVQICMGLLHPFKVLLLDE+TVDLDVVARMDLL+FFK+ECEQRGATIVYATHIFDGLETWA+HLAYI GEL+ + KL E+ +L+ S NLLSVVE+ LRSETK+EKK P Sbjct: 12 AIRVSGMQFSYDVQD--PIFFDFNLDLPAGSRCLLVGANGSGKTTLLKILAGKHMVGGKNVVQVLDRSAFHDTELVCSGDLSYLGGSWSKTAGSAGDIPLQGDFSAEHMIFGVEGIDPFRREKLIDLLDINLQWRMHKVSDGQRRRVQICMGLLHPFKVLLLDEVTVDLDVVARMDLLEFFKEECEQRGATIVYATHIFDGLETWASHLAYINGGELKLSAKLDEIKDLKTSPNLLSVVEAWLRSETKVEKKTKKKP 266
BLAST of FC873515 vs. ExPASy Swiss-Prot
Match: AB20I_ARATH (ABC transporter I family member 20 OS=Arabidopsis thaliana GN=ABCI20 PE=2 SV=1) HSP 1 Score: 303.523 bits (776), Expect = 9.259e-82 Identity = 157/272 (57.72%), Postives = 200/272 (73.53%), Query Frame = 3 Query: 9 MADGMNENEKLNSVKVCGMQFSYEGND------KPPLFYDFNLGISPGSRCLLVGANGSGKTTLLKILAGKHMVGGRDVVQVLNRSSFHDTQLVCSGDLSYLGGSWSKTVGSAG-EIPLQGDFSAEHMIFGVEGSDPVRRERLIELLDIDLQWRMHKVSDGQRRRVQICMGLLHPFKVLLLDEITVDLDVVARMDLLDFFKDECEQRGATIVYATHIFDGLETWATHLAYIQDGELRRAEKLAELDELRNSTNLLSVVESCLRSETKLEKKR 803 MA E ++ ++V++ G++F+Y G D PL DF++ ++ RCLLVG+NG+GKTT+LKIL GKHMV +V+VL RS+FHDT L SGDL YLGG W + V AG E+P+Q D SAE MIFGV G DP RR+ LI++LDID+ WR+HKVSDGQRRRVQICMGLL PFKVLLLDEITVDLDV+AR DLL F + ECE+RGATI+YATHIFDGLE W TH+ Y+ +G+L+ A + ++ E + +L+ VES LR E E+KR Sbjct: 1 MAVTEEEKKRNSTVEISGLRFTYPGIDGHPPPGSKPLIEDFSITLNSSDRCLLVGSNGAGKTTILKILGGKHMVEPH-MVRVLGRSAFHDTGLTSSGDLCYLGGEWRRDVAFAGFEVPIQMDISAEKMIFGVAGIDPQRRDELIKVLDIDISWRLHKVSDGQRRRVQICMGLLKPFKVLLLDEITVDLDVLARADLLKFLRKECEERGATIIYATHIFDGLEDWPTHIVYVANGKLQLALPMEKVKE-TSKKSLMRTVESWLRKERDEERKR 270
BLAST of FC873515 vs. ExPASy Swiss-Prot
Match: YE31_SCHPO (Uncharacterized ABC transporter ATP-binding protein C20G4.01 OS=Schizosaccharomyces pombe GN=SPAC20G4.01 PE=4 SV=2) HSP 1 Score: 191.815 bits (486), Expect = 3.926e-48 Identity = 116/256 (45.31%), Postives = 155/256 (60.55%), Query Frame = 3 Query: 48 VKVCGMQFSYEGNDKPPLFYDF-NLGISPGSRCLLVGANGSGKTTLLKILAGKHMVGGRDVVQVLNRSSFHDTQLVCSGDLSYLGGSWSKTVGSAGEIPLQGDFSAEHMIFGVEGSD-PVRRERLIELLDIDLQWRMHKVSDGQRRRVQICMGLLHPFKVLLLDEITVDLDVVARMDLLDFFKDECEQRGATIVYATHIFDGLETWATHLAYIQDGELRRAEKLAELDEL--RNSTNLLSVVESCLRSETKLEKKR 803 ++V SY + K PL D L + GSR LLVGANG+GK+TLLK+L+GK + + V + F ++ S YLG W + D S +I V G RR+ LI +LDIDL+WRMH VSDG+RRRVQ+CMGLL PF+VLLLDE+TVDLDV+AR DLL+F ++E E R ATIVYATHIFDGL W THL ++ G + +++ L R+ST +++E+CL + +K R Sbjct: 1 MEVTVSNLSYTFSPKQPLSLDHVTLDLPKGSRTLLVGANGAGKSTLLKLLSGKSLAKAGHI-SVGGKDPFRES----SSAFVYLGTEW------VNNPVIHRDMSVARLIASVGGDKFAERRDFLISILDIDLRWRMHAVSDGERRRVQLCMGLLRPFEVLLLDEVTVDLDVLARADLLNFLQEETEVRNATIVYATHIFDGLAEWPTHLVHLSLGRIVDYGPISKFGALMTRSSTGNSALLETCLEWLKEDKKNR 245
BLAST of FC873515 vs. ExPASy Swiss-Prot
Match: CAF16_YEAST (CCR4-associated factor 16 OS=Saccharomyces cerevisiae GN=CAF16 PE=1 SV=1) HSP 1 Score: 164.466 bits (415), Expect = 6.713e-40 Identity = 95/231 (41.13%), Postives = 138/231 (59.74%), Query Frame = 3 Query: 45 SVKVCGMQFSYEGNDKPPLFYDFNLGISPGSRCLLVGANGSGKTTLLKILAGKHM-------VGGRDVVQVLNRSSFHDTQLVCSGD----LSYLGGSW---SKTVGSAGEIPLQGDFSAEHMIFGVEGSDPVRRERLIELLDIDLQWRMHKVSDGQRRRVQICMGLLHPFKVLLLDEITVDLDVVARMDLLDFFKDECEQRGATIVYATHIFDGLETWATHLAYIQDGEL 695 +++V + + ++ + P + D NL I +R L+VGANG+GK+TLLK+L+GKH+ V G D L+ + D + V +YLG W S G + L +H R ERL+ +LDID++WRMH++SDGQ+RRVQ+ MGLL P++VLLLDE+TVDLDV+AR LL+F K E E R ++VYATHIFDGL W + +++ G++ Sbjct: 6 AIEVRNLTYKFKESSDPSVV-DINLQIPWNTRSLVVGANGAGKSTLLKLLSGKHLCLDGKILVNGLDPFSPLSMNQVDDDESVEDSTNYQTTTYLGTEWCHMSIINRDIGVLELLKSIGFDHF--------RERGERLVRILDIDVRWRMHRLSDGQKRRVQLAMGLLKPWRVLLLDEVTVDLDVIARARLLEFLKWETETRRCSVVYATHIFDGLAKWPNQVYHMKSGKI 227
BLAST of FC873515 vs. ExPASy Swiss-Prot
Match: CBIO2_ENTFA (Cobalt import ATP-binding protein cbiO 2 OS=Enterococcus faecalis GN=cbiO2 PE=3 SV=2) HSP 1 Score: 75.8702 bits (185), Expect = 3.140e-13 Identity = 62/235 (26.38%), Postives = 109/235 (46.38%), Query Frame = 3 Query: 63 MQFSYEGND--KPPLFYDFNLGISPGSRCLLVGANGSGKTTLLKIL-------AGKHMVGGRDVVQVLNRSSFHDTQLVCSGDLSYLGGSWSKTVGSAGEIP--------LQGDFSAEHMIFGVEGSDPVR-RERLIELLDIDLQWRMH---KVSDGQRRRVQICMGLLHPFKVLLLDEITVDLDVVARMDLLDFFKDECEQRGATIVYATHIFDGLETWATHLAYIQDGELRRA 704 + F+Y+ N + +D NL I GS +VG GSGK+TLL+ L G+ +G R + + + + K VG + P ++ D + FGV + + +++++L+ +D ++ H ++S GQ RRV I L +VL+LDE T LD R ++++ F ++ TIV TH+ D + +A H+ ++ G++ RA Sbjct: 8 VDFTYQPNTPFEQRALFDINLTIQDGSYTAIVGHTGSGKSTLLQHLNALVKPTKGQVTIGERVITPETDNKNLKPIR---------------KKVGIVFQFPEAQLFEETVERDIAFGPKNFGVSDEEAKKLAKKMLDLVGLDEKYLQHSPFELSGGQMRRVAIAGVLAMEPEVLVLDEPTAGLDPKGRKEMMEMFSRLHKEHNMTIVLVTHLMDDVANYADHVIVLEKGQIVRA 227
BLAST of FC873515 vs. ExPASy Swiss-Prot
Match: CBIO1_LACSS (Cobalt import ATP-binding protein cbiO 1 OS=Lactobacillus sakei subsp. sakei (strain 23K) GN=cbiO1 PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.558e-12 Identity = 59/208 (28.37%), Postives = 95/208 (45.67%), Query Frame = 3 Query: 114 NLGISPGSRCLLVGANGSGKTTLLKIL-------AGKHMVGGRDVVQVLNRSSFHDTQLVCSGDLSYLGGSWSKTVGSAGEIPLQGDFSAEHMIFGVEGSDPVRRER----LIELLDIDLQWRMHKVSDGQRRRVQICMGLLHPFKVLLLDEITVDLDVVARMDLLDFFKDECEQRGATIVYATHIFDGLETWATHLAYIQDGELRRA 704 NL I GS L+G GSGK+TLL+ L G +G R + N + + +G + E +Q D + FGV ++ + R + L+ L + L+ +S GQ RRV I L +VL+LDE T LD V R +++ F+ ++G TIV TH D + +A H+ +++G + ++ Sbjct: 27 NLTIESGSYTALIGHTGSGKSTLLQHLNALLKPTEGVVQIGERQITPETNNKNLKVIR-------QKVGMVFQFPESQLFEATVQKDIAFGPQNFGVPEAEALERAKAMVELVGLPEAVLEQSPFDLSGGQMRRVAIAGVLAMQPEVLILDEPTAGLDPVGRREMMGLFEKLHREQGMTIVMVTHQMDDVANYADHVVVLENGGIAKS 227
BLAST of FC873515 vs. ExPASy Swiss-Prot
Match: YADG_ECOLI (Uncharacterized ABC transporter ATP-binding protein yadG OS=Escherichia coli (strain K12) GN=yadG PE=1 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 3.472e-12 Identity = 64/236 (27.12%), Postives = 109/236 (46.19%), Query Frame = 3 Query: 114 NLGISPGSRCLLVGANGSGKTTLLKILAGKHMVGGRDVVQVLNRSSFHDTQLVCSGDLSYLGGSWSKTVGSA----GEIPLQGDFSAEHMI----------FGVEGSDP-VRRERLIELLDIDLQW-----RMHKVSDGQRRRVQICMGLLHPFKVLLLDEITVDLDVVARMDLLDFFKDECEQRGATIVYATHIFDGLETWATHLAYIQDGEL-RRAEKLAELDELRNSTNLLSV 758 +L + G L+G NG+GK+T + I++ ++N++S G +S G K V +A G +P + +F+ + +GVE + +R E+ ++ LD+ W R +S G +RR+ I L+H K+L+LDE T +D+ R + F KD +G TI+ TH + E ++ IQ GEL A L +L++ T +L + Sbjct: 25 DLQVEAGDFYALLGPNGAGKSTTIGIISS-----------LVNKTS---------GRVSVFGYDLEKDVVNAKRQLGLVPQEFNFNPFETVQQIVVNQAGYYGVERKEAYIRSEKYLKQLDL---WGKRNERARMLSGGMKRRLMIARALMHEPKLLILDEPTAGVDIELRRSMWGFLKD-LNDKGTTIILTTHYLEEAEMLCRNIGIIQHGELVENTSMKALLAKLKSETFILDL 236
BLAST of FC873515 vs. ExPASy Swiss-Prot
Match: METN2_ACIAD (Methionine import ATP-binding protein metN 2 OS=Acinetobacter sp. (strain ADP1) GN=metN2 PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 5.922e-12 Identity = 62/207 (29.95%), Postives = 101/207 (48.79%), Query Frame = 3 Query: 114 NLGISPGSRCLLVGANGSGKTTLLKILA-------GKHMVGGRDVVQVLNRSSFHDTQLVCSGDLSYLGGSWSKTVGSAGEIPLQGDFSAEHMIFGVEGSDPVRRE-RLIELLD-IDLQWRMH----KVSDGQRRRVQICMGLLHPFKVLLLDEITVDLDVVARMDLLDFFKDECEQRGATIVYATHIFDGLETWATHLAYIQDGEL 695 NL I GS ++G +G+GK+TL++++ G+ ++ +D LN S + + +KTV + E+PL+ + G + RE RL+ELLD IDL + ++S GQ++RV I L + K+LL DE T LD +L K +++G TIV TH D +E+ H+A ++ G + Sbjct: 25 NLDIPAGSIFGIIGYSGAGKSTLIRLINLLERPTHGQIIINQKDFT-ALNAQSLRQERANIGMIFQHFNLLQTKTVAANIEMPLK-----------LLGYSKIEREKRLMELLDFIDLTHKKDAFPDELSGGQKQRVGIARALANHPKILLCDEATSALDPQTTKSVLALLKKINKEQGITIVMVTHEMDVIESICDHVAVMESGHV 219
BLAST of FC873515 vs. ExPASy Swiss-Prot
Match: NOSF_PSEST (Copper transport ATP-binding protein nosF OS=Pseudomonas stutzeri GN=nosF PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.723e-11 Identity = 64/230 (27.83%), Postives = 109/230 (47.39%), Query Frame = 3 Query: 39 LNSVKVCGMQFSYEGNDKPPLFYDFNLGISPGSRCLLVGANGSGKTTLLKILAGKHMVGGRDVVQVLNRSSFHDTQLVCSGDLSYLGGSWSKTVGSAGEIPLQGDFSAEHMIFGVEGSDPVRRERLIELLDI--DLQWRMHKVSDGQRRRVQICMGLLHPFKVLLLDEITVDLDVVARMDLLDFFKDECEQRGATIVYATHIFDGLETWATHLAYIQDGELRRAEKLAEL 722 +N+V++ G+ Y + +D NL + G L G NG+GKTT +K++ G + V+VL R+ +D Q+ L YL + + +G L+ ++G+ + + L+E + + R+ S G R+R+ + LL ++LLLDE TV LD +A DL D QRG +I+ +H+ G+E A + G L+ L++L Sbjct: 1 MNAVEIQGVSQRY---GSMTVLHDLNLNLGEGEVLGLFGHNGAGKTTSMKLILGL-LSPSEGQVKVLGRAP-NDPQV--RRQLGYLPENVTFYPQLSGRETLR-------HFARLKGAALTQVDELLEQVGLAHAADRRVKTYSKGMRQRLGLAQALLGEPRLLLLDEPTVGLDPIATQDLY-LLIDRLRQRGTSIILCSHVLPGVEAHINRAAILAKGCLQAVGSLSQL 215 The following BLAST results are available for this feature:
BLAST of FC873515 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 23
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Sequences
The
following sequences are available for this feature:
EST sequence >FC873515 ID=FC873515; Name=FC873515; organism=Citrus clementina; type=EST; length=828bpback to top |