FC873632

Overview
NameFC873632
Unique NameFC873632
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length844
Libraries
Library NameType
AbsDevcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC873632 vs. ExPASy Swiss-Prot
Match: Y5457_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g45780 OS=Arabidopsis thaliana GN=At5g45780 PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 3.424e-15
Identity = 48/131 (36.64%), Postives = 72/131 (54.96%), Query Frame = 3
Query:  336 VLTNWKGNEGDPCGESWKGVACEGSA-VVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLPP--NLTSLNLASNNFSGNLPYSIASMVSLSYLNVSRNSLTQSIGDIFGNLAGLATLDLSF 719
            VL+ W  N  DPC  +W  V C     VVS++++  GLSG +   + +L  L    L  N +   IP +L     L +L+L+ N FSG +P S+  +  L+YL +SRN L+  +  +   L+GL+ LDLSF
Sbjct:   56 VLSGWDINSVDPC--TWNMVGCSSEGFVVSLEMASKGLSGILSTSIGELTHLHTLLLQNNQLTGPIPSELGQLSELETLDLSGNRFSGEIPASLGFLTHLNYLRLSRNLLSGQVPHLVAGLSGLSFLDLSF 184          
BLAST of FC873632 vs. ExPASy Swiss-Prot
Match: HSL1_ARATH (Receptor-like protein kinase HSL1 OS=Arabidopsis thaliana GN=HSL1 PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 3.424e-15
Identity = 60/191 (31.41%), Postives = 90/191 (47.12%), Query Frame = 3
Query:  243 IFLTLSLVQCTTDSSDVQALQVLYTSLNSP-SVLTNWKGNEGDPCGESWKGVACEG--SAVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPY--------------------QLP------PNLTSLNLASNNFSGNLPYSIASMVSLSYLNVSRNSLTQSIGDIFGNLAGLATLDLSFTIF 728
            +FL L      + + D   LQ +  SL+ P S L++W  N+  PC   W GV+C G  S+V S+D+S   L+G    ++  L +L    L  NSI+ T+P                     +LP      P L  L+L  NNFSG++P S     +L  L++  N L  +I    GN++ L  L+LS+  F
Sbjct:    4 LFLFLLFPTVFSLNQDGFILQQVKLSLDDPDSYLSSWNSNDASPC--RWSGVSCAGDFSSVTSVDLSSANLAGPFPSVICRLSNLAHLSLYNNSINSTLPLNIAACKSLQTLDLSQNLLTGELPQTLADIPTLVHLDLTGNNFSGDIPASFGKFENLEVLSLVYNLLDGTIPPFLGNISTLKMLNLSYNPF 192          
BLAST of FC873632 vs. ExPASy Swiss-Prot
Match: GSO2_ARATH (LRR receptor-like serine/threonine-protein kinase GSO2 OS=Arabidopsis thaliana GN=GSO2 PE=2 SV=2)

HSP 1 Score: 82.4185 bits (202), Expect = 3.424e-15
Identity = 49/137 (35.77%), Postives = 74/137 (54.01%), Query Frame = 3
Query:  315 TSLNSPSVLTNWKGNEGDPCGESWKGVACEGSAVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIP---YQLPPNLTSLNLASNNFSGNLPYSIASMVSLSYLNVSRNSLTQSIGDIFGNLAGLATLDLS 716
            T+     VL +W  N G P   +W GV C G  ++ +++SGLGL+G++   +    +L   DLS N +   IP     L  +L SL+L SN  SG++P  + S+V+L  L +  N L  +I + FGNL  L  L L+
Sbjct:   42 TNPKEEDVLRDW--NSGSPSYCNWTGVTCGGREIIGLNLSGLGLTGSISPSIGRFNNLIHIDLSSNRLVGPIPTTLSNLSSSLESLHLFSNLLSGDIPSQLGSLVNLKSLKLGDNELNGTIPETFGNLVNLQMLALA 176          
BLAST of FC873632 vs. ExPASy Swiss-Prot
Match: Y2239_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At2g23950 OS=Arabidopsis thaliana GN=At2g23950 PE=2 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 4.472e-15
Identity = 55/172 (31.98%), Postives = 91/172 (52.91%), Query Frame = 3
Query:  216 IDAFVLILSIFLTLSLVQCTTDSSDVQALQVLYTSLNSP-SVLTNWKGNEGDPCGESWKGVACEG-SAVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLP--PNLTSLNLASNNFSGNLPYSIASMVSLSYLNVSRNSLTQSIGDIFGNLAGLATLDLSF 719
            I + +L+L  F+T SL      + +V+AL  +   L+ P  V  NW     DPC  SW  ++C   + V+ +      LSGT+   + +L +LR+  L  N+I   IP ++   P L +L+L++N FSG +P S+  + +L YL ++ NSL+         +  L+ LDLS+
Sbjct:   11 IFSVLLLLCFFVTCSL-SSEPRNPEVEALINIKNELHDPHGVFKNWDEFSVDPC--SWTMISCSSDNLVIGLGAPSQSLSGTLSGSIGNLTNLRQVSLQNNNISGKIPPEICSLPKLQTLDLSNNRFSGEIPGSVNQLSNLQYLRLNNNSLSGPFPASLSQIPHLSFLDLSY 179          
BLAST of FC873632 vs. ExPASy Swiss-Prot
Match: Y2165_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At2g16250 OS=Arabidopsis thaliana GN=At2g16250 PE=1 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 9.226e-15
Identity = 48/140 (34.29%), Postives = 79/140 (56.43%), Query Frame = 3
Query:  342 TNWKGNEGDPCGESWKGVACEGSAVVSIDISGLGLSGTMGYL--------LSDLLSLRKFDLSGNSIHDTIPYQLPPNLTSL---NLASNNFSGNLPYSIASMVSLSYLNVSRNSLTQSIGDIFGNLAGLATLDLSFTIF 728
            T+W   +GDPC + W+G+ CE  +++ I+ISG   +  +G L        L +L  L  F+ SG ++  TIP     +L +L   +L+S + +G +P+++ ++ SL  LN+S+NSLT  +    G L  L+ LDLS   F
Sbjct:   52 TDWP-IKGDPCVD-WRGIQCENGSIIGINISGFRRT-RIGKLNPQFSVDPLRNLTRLSYFNASGLALPGTIPEWFGVSLLALEVLDLSSCSVNGVVPFTLGNLTSLRTLNLSQNSLTSLVPSSLGQLLNLSQLDLSRNSF 188          

HSP 2 Score: 30.4166 bits (67), Expect = 9.226e-15
Identity = 14/31 (45.16%), Postives = 22/31 (70.97%), Query Frame = 2
Query:  719 HNFSGDLPNSFISLFNISSLYLQNNQLTGSL 811
            ++F+G LP SF SL N+ +L + +N LTG +
Sbjct:  186 NSFTGVLPQSFSSLKNLLTLDVSSNYLTGPI 216          
BLAST of FC873632 vs. ExPASy Swiss-Prot
Match: IMK2_ARATH (Probably inactive leucine-rich repeat receptor-like protein kinase IMK2 OS=Arabidopsis thaliana GN=IMK2 PE=1 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 4.444e-14
Identity = 46/148 (31.08%), Postives = 72/148 (48.65%), Query Frame = 3
Query:  285 SDVQALQVL-YTSLNSPSVLTNWKGNEGDPCGESWKGVACEGSAVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLP--PNLTSLNLASNNFSGNLPYSIASMVSLSYLNVSRNSLTQSIGDIFGNLAGLATLDLSF 719
            ++ QALQ + +  ++   VL +W  +        W G+ C    VV+I +   GL GT+   +  L SLRK  L  N I  ++P  L    +L  + L +N  SG++P S+ +   L  L++S N LT +I         L  L+LSF
Sbjct:   52 ANYQALQAIKHELIDFTGVLKSWNNSASSQVCSGWAGIKCLRGQVVAIQLPWKGLGGTISEKIGQLGSLRKLSLHNNVIAGSVPRSLGYLKSLRGVYLFNNRLSGSIPVSLGNCPLLQNLDLSSNQLTGAIPPSLTESTRLYRLNLSF 199          

HSP 2 Score: 30.0314 bits (66), Expect = 4.444e-14
Identity = 18/46 (39.13%), Postives = 26/46 (56.52%), Query Frame = 2
Query:  716 FHNFSGDLPNSFISLFNISSLYLQNNQLTGSLNVF---SGWPLTTL 844
            F++ SG LP S    + ++ L LQ+N L+GS+  F      PL TL
Sbjct:  199 FNSLSGPLPVSVARSYTLTFLDLQHNNLSGSIPDFFVNGSHPLKTL 244          

HSP 3 Score: 67.781 bits (164), Expect = 8.728e-11
Identity = 46/129 (35.66%), Postives = 70/129 (54.26%), Query Frame = 3
Query:  399 CEGSAVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIP--YQLPPNLTSLNLASNNFSGNLPYSIASMVSLSYLNVSRNSLTQSIGDIFGNLAGLATLDLS---FTIFLEIFRIHLFHCSIF 770
            C+ S +  + IS   LSG++      L  L+  D S NSI+ TIP  +    +L SLNL SN+  G +P +I  + +L+ LN+ RN +   I +  GN++G+  LDLS   FT  + +  +HL   S F
Sbjct:  260 CKHSLLEEVSISHNQLSGSIPRECGGLPHLQSLDFSYNSINGTIPDSFSNLSSLVSLNLESNHLKGPIPDAIDRLHNLTELNLKRNKINGPIPETIGNISGIKKLDLSENNFTGPIPLSLVHLAKLSSF 388          
BLAST of FC873632 vs. ExPASy Swiss-Prot
Match: ERECT_ARATH (LRR receptor-like serine/threonine-protein kinase ERECTA OS=Arabidopsis thaliana GN=ERECTA PE=1 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 7.472e-14
Identity = 51/168 (30.36%), Postives = 84/168 (50.00%), Query Frame = 3
Query:  228 VLILSIFLTLSLVQCTTDSSDVQALQVLYTSLNSPSVLTNWKGN-EGDPCGESWKGVACEGSA--VVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLPP--NLTSLNLASNNFSGNLPYSIASMVSLSYLNVSRNSLTQSIGDIFGNLAGLATLDLS 716
            +++L     LSLV   T       L++  +  +  +VL +W  +   D C   W+GV+CE     VV++++S L L G +   + DL SL   DL GN +   IP ++    +L +L+L+ N  SG++P+SI+ +  L  L +  N L   I      +  L  LDL+
Sbjct:    7 IVLLGFLFCLSLVATVTSEEGATLLEIKKSFKDVNNVLYDWTTSPSSDYC--VWRGVSCENVTFNVVALNLSDLNLDGEISPAIGDLKSLLSIDLRGNRLSGQIPDEIGDCSSLQNLDLSFNELSGDIPFSISKLKQLEQLILKNNQLIGPIPSTLSQIPNLKILDLA 172          

HSP 2 Score: 21.1718 bits (43), Expect = 7.472e-14
Identity = 11/36 (30.56%), Postives = 18/36 (50.00%), Query Frame = 2
Query:  704 LGPLFHNFSGDLPNSFISLFNISSLYLQNNQLTGSL 811
            LG   +N  G++      L  +    ++NN LTGS+
Sbjct:  193 LGLRGNNLVGNISPDLCQLTGLWYFDVRNNSLTGSI 228          

HSP 3 Score: 60.077 bits (144), Expect = 6.632e-11
Identity = 35/101 (34.65%), Postives = 57/101 (56.44%), Query Frame = 3
Query:  420 SIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLPP--NLTSLNLASNNFSGNLPYSIASMVSLSYLNVSRNSLTQSIGDIFGNLAGLATLDLS 716
            S+++ G   SGT+      L S+   +LS N+I   IP +L    NL +L+L++N  +G +P S+  +  L  +N+SRN +T  +   FGNL  +  +DLS
Sbjct:  383 SLNVHGNKFSGTIPRAFQKLESMTYLNLSSNNIKGPIPVELSRIGNLDTLDLSNNKINGIIPSSLGDLEHLLKMNLSRNHITGVVPGDFGNLRSIMEIDLS 483          

HSP 4 Score: 28.1054 bits (61), Expect = 6.632e-11
Identity = 13/31 (41.94%), Postives = 19/31 (61.29%), Query Frame = 2
Query:  719 HNFSGDLPNSFISLFNISSLYLQNNQLTGSL 811
            ++ SG +P     L NI  L L+NN LTG++
Sbjct:  485 NDISGPIPEELNQLQNIILLRLENNNLTGNV 515          
BLAST of FC873632 vs. ExPASy Swiss-Prot
Match: Y5977_ARATH (Probable leucine-rich repeat receptor-like protein kinase At5g49770 OS=Arabidopsis thaliana GN=At5g49770 PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.439e-13
Identity = 57/177 (32.20%), Postives = 88/177 (49.72%), Query Frame = 3
Query:  207 SRLIDAFVLILSIFLTLSLVQCTTDSSDVQALQVLYTSLNSPSVLTNWKGNEGDPCGESWKGVACEG-SAVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLPPN------LTSLNLASNNFSGNLPYSIASMVSLSYLNVSRNSLTQSIGDIFGNLAGLATLDLS 716
            S  I  F L++ +F  +  V   TD SD  ALQ L    ++ S   +WK +  DPCG  W G+ C   + VVSI ++   L G +   +S L  L+  DL+GN     +   LP N      LT L+L    F+G +P SI ++  L+ L+++ N  + +I    G L+ L   D++
Sbjct:    4 SSRIGLFKLLILLFFQIYSVYAFTDGSDFTALQALKNEWDTLS--KSWKSS--DPCGTEWVGITCNNDNRVVSISLTNRNLKGKLPTEISTLSELQTLDLTGN---PELSGPLPANIGNLRKLTFLSLMGCAFNGPIPDSIGNLEQLTRLSLNLNKFSGTIPASMGRLSKLYWFDIA 173          
BLAST of FC873632 vs. ExPASy Swiss-Prot
Match: ERL2_ARATH (LRR receptor-like serine/threonine-protein kinase ERL2 OS=Arabidopsis thaliana GN=ERL2 PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.439e-13
Identity = 53/170 (31.18%), Postives = 93/170 (54.71%), Query Frame = 3
Query:  225 FVLILSIFLTLSLVQCTTDSSDVQALQVLYTSL-NSPSVLTNWKG-NEGDPCGESWKGVACEGSA--VVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLPP--NLTSLNLASNNFSGNLPYSIASMVSLSYLNVSRNSLTQSIGDIFGNLAGLATLDLS 716
            F L + +F+ L  V  +  +++ +AL  +  S  N  ++L +W   +  D C  SW+GV C+  +  VVS+++S L L G +   L DL++L+  DL GN +   IP ++    +L  ++ ++N   G++P+SI+ +  L +LN+  N LT  I      +  L TLDL+
Sbjct:   12 FCLGMVVFMLLGSV--SPMNNEGKALMAIKASFSNVANMLLDWDDVHNHDFC--SWRGVFCDNVSLNVVSLNLSNLNLGGEISSALGDLMNLQSIDLQGNKLGGQIPDEIGNCVSLAYVDFSTNLLFGDIPFSISKLKQLEFLNLKNNQLTGPIPATLTQIPNLKTLDLA 177          
BLAST of FC873632 vs. ExPASy Swiss-Prot
Match: SERK2_ARATH (Somatic embryogenesis receptor kinase 2 OS=Arabidopsis thaliana GN=SERK2 PE=1 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.879e-13
Identity = 53/168 (31.55%), Postives = 87/168 (51.79%), Query Frame = 3
Query:  225 FVLILSIFLTLSLVQCTTDSSDVQALQVLYTSLNSPS-VLTNWKGNEGDPCGESWKGVACEG-SAVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLP--PNLTSLNLASNNFSGNLPYSIASMVSLSYLNVSRNSLTQSIGDIFGNLAGLATLDLS 716
            FV ++S+ L  + +   + + +  AL  L  +L  P+ VL +W     +PC  +W  V C   ++V+ +D+    LSG +   L  L +L+  +L  N+I   +P  L    NL SL+L  N+F+G +P S+  +  L +L ++ NSLT  I     N+  L  LDLS
Sbjct:   11 FVCLISLLLLFNSLWLASSNMEGDALHSLRANLVDPNNVLQSWDPTLVNPC--TWFHVTCNNENSVIRVDLGNADLSGQLVPQLGQLKNLQYLELYSNNITGPVPSDLGNLTNLVSLDLYLNSFTGPIPDSLGKLFKLRFLRLNNNSLTGPIPMSLTNIMTLQVLDLS 176          
The following BLAST results are available for this feature:
BLAST of FC873632 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 40
Match NameE-valueIdentityDescription
Y5457_ARATH3.424e-1536.64Probable LRR receptor-like serine/threonine-protei... [more]
HSL1_ARATH3.424e-1531.41Receptor-like protein kinase HSL1 OS=Arabidopsis t... [more]
GSO2_ARATH3.424e-1535.77LRR receptor-like serine/threonine-protein kinase ... [more]
Y2239_ARATH4.472e-1531.98Probable LRR receptor-like serine/threonine-protei... [more]
Y2165_ARATH9.226e-1534.29Probable LRR receptor-like serine/threonine-protei... [more]
IMK2_ARATH4.444e-1431.08Probably inactive leucine-rich repeat receptor-lik... [more]
ERECT_ARATH7.472e-1430.36LRR receptor-like serine/threonine-protein kinase ... [more]
Y5977_ARATH1.439e-1332.20Probable leucine-rich repeat receptor-like protein... [more]
ERL2_ARATH1.439e-1331.18LRR receptor-like serine/threonine-protein kinase ... [more]
SERK2_ARATH1.879e-1331.55Somatic embryogenesis receptor kinase 2 OS=Arabido... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI1DE05FM2 AbsDev Citrus clementina cDNA clone KN0AAI1DE05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC873632 ID=FC873632; Name=FC873632; organism=Citrus clementina; type=EST; length=844bp
CAGCAATGCCTCTCAACAACTTCTACTTGCCCCCTATCCCTAACCTCAGC
TTCTTCTTCTCTTTCGAATCCACGTTACTCTATCATGCACTTCACCACGC
CTAATCCTCACCTCTCTCAACACTGAACTGAACTCCTCAAACTACCAGAA
CCATAACCACAATGGCTGTTCAATACACCGCCGTTTTTCCCCTTCCCTTT
TCCACATCTCGTTTGATCGATGCCTTCGTGTTGATCCTGTCGATCTTCTT
AACTCTGTCTCTTGTTCAATGCACTACTGATTCTTCTGACGTTCAAGCAC
TTCAAGTATTGTACACTTCGCTAAACAGTCCTTCAGTGCTAACTAATTGG
AAAGGCAATGAAGGTGATCCATGTGGAGAGTCGTGGAAAGGGGTAGCTTG
TGAGGGATCAGCTGTCGTTTCCATTGACATTTCTGGGTTAGGACTCAGTG
GAACAATGGGATACCTGCTTTCAGATCTTCTGTCATTGAGAAAATTTGAT
TTGAGTGGCAACAGCATTCATGACACGATCCCATATCAATTACCTCCAAA
TCTTACCAGCCTAAATCTTGCAAGCAACAACTTTAGTGGGAATCTTCCTT
ATTCTATTGCTAGCATGGTCTCACTCTCTTATTTGAATGTTAGCCGTAAT
TCGCTTACCCAGTCAATCGGAGACATTTTTGGTAATCTTGCTGGCCTCGC
AACCTTGGACCTCTCTTTCACAATTTTTCTGGAGATCTTCCGAATTCATT
TATTTCATTGTTCAATATTTCTTCGCTCTATCTGCAGAACAATCAATTGA
CTGGTTCTCTTAATGTCTTTTCCGGCTGGCCTTTGACTACTCTA
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