FC873632
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC873632 vs. ExPASy Swiss-Prot
Match: SRF8_ARATH (Protein STRUBBELIG-RECEPTOR FAMILY 8 OS=Arabidopsis thaliana GN=SRF8 PE=2 SV=1) HSP 1 Score: 249.595 bits (636), Expect = 9.339e-76 Identity = 124/172 (72.09%), Postives = 140/172 (81.40%), Query Frame = 3 Query: 213 LIDAFVLILSIFLTLSLVQCTTDSSDVQALQVLYTSLNSPSVLTNWKGNEGDPCGESWKGVACEGSAVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLPPNLTSLNLASNNFSGNLPYSIASMVSLSYLNVSRNSLTQSIGDIFGNLAGLATLDLSFTIF 728 + +L ++ S+V+C TD SDVQALQVLYTSLNSPS LTNWK GDPCGESWKG+ CEGSAVV+IDIS LG+SGT+GYLLSDL SLRK D+SGNSIHDT+PYQLPPNLTSLNLA NN SGNLPYSI++M SLSY+NVS NSLT SIGDIF + LATLDLS F Sbjct: 8 MFTVLLLFIASISGFSVVRCVTDPSDVQALQVLYTSLNSPSQLTNWKNGGGDPCGESWKGITCEGSAVVTIDISDLGVSGTLGYLLSDLKSLRKLDVSGNSIHDTLPYQLPPNLTSLNLARNNLSGNLPYSISAMGSLSYMNVSGNSLTMSIGDIFADHKSLATLDLSHNNF 179 HSP 2 Score: 56.225 bits (134), Expect = 9.339e-76 Identity = 26/42 (61.90%), Postives = 34/42 (80.95%), Query Frame = 2 Query: 719 HNFSGDLPNSFISLFNISSLYLQNNQLTGSLNVFSGWPLTTL 844 +NFSGDLP+S ++ +S LY+QNNQLTGS++V SG PL TL Sbjct: 177 NNFSGDLPSSLSTVSTLSVLYVQNNQLTGSIDVLSGLPLKTL 218
BLAST of FC873632 vs. ExPASy Swiss-Prot
Match: SRF5_ARATH (Protein STRUBBELIG-RECEPTOR FAMILY 5 OS=Arabidopsis thaliana GN=SRF5 PE=2 SV=1) HSP 1 Score: 171.785 bits (434), Expect = 1.719e-46 Identity = 79/163 (48.47%), Postives = 115/163 (70.55%), Query Frame = 3 Query: 228 VLILSIFLTLSLVQCTTDSSDVQALQVLYTSLNSPSVLTNWKGNEGDPCGESWKGVACEGSAVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLPPNLTSLNLASNNFSGNLPYSIASMVSLSYLNVSRNSLTQSIGDIFGNLAGLATLDLS 716 ++I+S+ +T++L+Q TD+ +V AL V++TSLNSPS L WK N GDPC +SW+GV C+GS+V + +SG L G+ GYLLS+L SL FDLS N++ IPYQLPPN+ +L+ + N GN+PYS++ M +L +N+ +N L + D+F L+ L TLD S Sbjct: 8 LVIVSLAITVTLLQAKTDNQEVSALNVMFTSLNSPSKLKGWKANGGDPCEDSWEGVKCKGSSVTELQLSGFELGGSRGYLLSNLKSLTTFDLSKNNLKGNIPYQLPPNIANLDFSENELDGNVPYSLSQMKNLQSINLGQNKLNGELPDMFQKLSKLETLDFS 170 HSP 2 Score: 36.1946 bits (82), Expect = 1.719e-46 Identity = 15/33 (45.45%), Postives = 23/33 (69.70%), Query Frame = 2 Query: 719 HNFSGDLPNSFISLFNISSLYLQNNQLTGSLNV 817 + SG LP SF +L ++ L+LQ+N+ TG +NV Sbjct: 172 NKLSGKLPQSFANLTSLKKLHLQDNRFTGDINV 204
BLAST of FC873632 vs. ExPASy Swiss-Prot
Match: SRF7_ARATH (Protein STRUBBELIG-RECEPTOR FAMILY 7 OS=Arabidopsis thaliana GN=SRF7 PE=1 SV=1) HSP 1 Score: 162.925 bits (411), Expect = 3.166e-45 Identity = 77/175 (44.00%), Postives = 114/175 (65.14%), Query Frame = 3 Query: 207 SRLIDAFVLILSIFLTLSLVQCTTDSSDVQALQVLYTSLNSPSVLTNWKGNEGDPCGESWKGVACEGSAVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLPPNLTSLNLASNNFSGNLPYSIASMVSLSYLNVSRNSLTQSIGDIFGNLAGLATLDLSFTIFL 731 +R++ A +++ + S + TDSSD AL ++++S+NSP L+ W + GDPCG++WKG+ C GS V I + LGLSG++G++L L S+ +FD+S N++ +PYQLPPNL LNLA+N F+G+ YSI+ M L YLN++ N L Q D F L L+ LDLS F+ Sbjct: 4 NRVVLALLILCIVGFEPSFIHGATDSSDTSALNIMFSSMNSPGQLSQWTASGGDPCGQNWKGITCSGSRVTQIKLPSLGLSGSLGFMLDKLTSVTEFDMSNNNLGGDLPYQLPPNLERLNLANNQFTGSAQYSISMMAPLKYLNLAHNQLKQLAID-FTKLTSLSILDLSSNAFI 177 HSP 2 Score: 40.817 bits (94), Expect = 3.166e-45 Identity = 18/40 (45.00%), Postives = 27/40 (67.50%), Query Frame = 2 Query: 725 FSGDLPNSFISLFNISSLYLQNNQLTGSLNVFSGWPLTTL 844 F G LPN+ SL + S+YLQNNQ +G++++ + PL L Sbjct: 176 FIGSLPNTCSSLTSAKSIYLQNNQFSGTIDILATLPLENL 215
BLAST of FC873632 vs. ExPASy Swiss-Prot
Match: SRF6_ARATH (Protein STRUBBELIG-RECEPTOR FAMILY 6 OS=Arabidopsis thaliana GN=SRF6 PE=1 SV=1) HSP 1 Score: 151.369 bits (381), Expect = 2.021e-44 Identity = 74/159 (46.54%), Postives = 97/159 (61.01%), Query Frame = 3 Query: 255 LSLVQCTTDSSDVQALQVLYTSLNSPSVLTNWKGNEGDPCGESWKGVACEGSAVVSIDISGLGLSGTMG-YLLSDLLSLRKFDLSGNSIHDTIPYQLPPNLTSLNLASNNFSGNLPYSIASMVSLSYLNVSRNSLTQSIGDIFGNLAGLATLDLSFTIF 728 L + TD+SD AL L++ ++SP+ LT W GDPCG++W+GV C GS V I +SGL LSGT+G Y+L L SL + DLS N++ +PYQ PPNL LNLA+N F+G YS++ + L YLN+ N I F L L TLD SF F Sbjct: 20 LRFIHGATDASDTSALNTLFSGMHSPAQLTQWTAAAGDPCGQNWRGVTCSGSRVTQIKLSGLELSGTLGGYMLDKLTSLTELDLSSNNLGGDLPYQFPPNLQRLNLANNQFTGAASYSLSQITPLKYLNLGHNQFKGQIAIDFSKLDSLTTLDFSFNSF 178 HSP 2 Score: 49.6766 bits (117), Expect = 2.021e-44 Identity = 22/43 (51.16%), Postives = 33/43 (76.74%), Query Frame = 2 Query: 716 FHNFSGDLPNSFISLFNISSLYLQNNQLTGSLNVFSGWPLTTL 844 F++F+ LP +F SL ++ SLYLQNNQ +G+++V +G PL TL Sbjct: 175 FNSFTNSLPATFSSLTSLKSLYLQNNQFSGTVDVLAGLPLETL 217
BLAST of FC873632 vs. ExPASy Swiss-Prot
Match: SRF4_ARATH (Protein STRUBBELIG-RECEPTOR FAMILY 4 OS=Arabidopsis thaliana GN=SRF4 PE=2 SV=1) HSP 1 Score: 165.236 bits (417), Expect = 4.017e-40 Identity = 81/169 (47.93%), Postives = 112/169 (66.27%), Query Frame = 3 Query: 210 RLIDAFVLILSIFLTLSLVQCTTDSSDVQALQVLYTSLNSPSVLTNWKGNEGDPCGESWKGVACEGSAVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLPPNLTSLNLASNNFSGNLPYSIASMVSLSYLNVSRNSLTQSIGDIFGNLAGLATLDLS 716 R++ F+ IF S+V TDS DV AL Y S+NSPS L W + GDPCG+SW G+ C+GS+V I +SG GLSG++GY L +L SL D+S N+++ +PYQLP LT L+ + N+F+GN+PYS++ M LSYLN+ RN+L + D+F L L T+DLS Sbjct: 7 RIVLVFIACFGIFT--SVVLAKTDSQDVSALNDAYKSMNSPSKLKGWSSSGGDPCGDSWDGITCKGSSVTEIKVSGRGLSGSLGYQLGNLKSLTYLDVSKNNLNGNLPYQLPDKLTYLDGSENDFNGNVPYSVSLMNDLSYLNLGRNNLNGELSDMFQKLPKLETIDLS 173
BLAST of FC873632 vs. ExPASy Swiss-Prot
Match: SRF2_ARATH (Protein STRUBBELIG-RECEPTOR FAMILY 2 OS=Arabidopsis thaliana GN=SRF2 PE=2 SV=1) HSP 1 Score: 133.265 bits (334), Expect = 1.043e-39 Identity = 68/166 (40.96%), Postives = 105/166 (63.25%), Query Frame = 3 Query: 222 AFVLILSIFLTLSLVQCTTDSSDVQALQVLYTSLNSPSVLTNWKGNEGDPCGESWKGVACEGSAVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLPPNLTSLNLASNNFSGNLPYSIASMVSLSYLNVSRNSLTQSIGDIFGNLAGLATLDLSF 719 A +L+ +I L+ + TD +V ALQ LY SL +P L W+ GDPCGE+W G++C GS++V + + L L G++G L L +L+ D+S N++ IP+ LPPN T +N+A NN + ++P+S+ M SL LN+S NSL+ +G++F L + +DLSF Sbjct: 11 ATILLTTILFVLA--KTDTDPLEVLALQDLYKSLRNPEQLRGWRLEGGDPCGEAWLGISCSGSSIVDLQLRELKLLGSLGNQLQHLHNLKILDVSFNNLEGEIPFGLPPNATHINMAYNNLTQSIPFSLPLMTSLQSLNLSHNSLSGPLGNVFSGLQ-IKEMDLSF 173 HSP 2 Score: 51.9878 bits (123), Expect = 1.043e-39 Identity = 24/43 (55.81%), Postives = 33/43 (76.74%), Query Frame = 2 Query: 716 FHNFSGDLPNSFISLFNISSLYLQNNQLTGSLNVFSGWPLTTL 844 F+N +GDLP+SF +L N++SLYLQNN+LTGS+ + PL L Sbjct: 173 FNNLTGDLPSSFGTLMNLTSLYLQNNRLTGSVIYLADLPLADL 215
BLAST of FC873632 vs. ExPASy Swiss-Prot
Match: SRF3_ARATH (Protein STRUBBELIG-RECEPTOR FAMILY 3 OS=Arabidopsis thaliana GN=SRF3 PE=1 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 1.918e-31 Identity = 59/163 (36.20%), Postives = 98/163 (60.12%), Query Frame = 3 Query: 231 LILSIFLTL-SLVQCTTDSSDVQALQVLYTSLNSPSVLTNWKGNEGDPCGESWKGVACEGSAVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLPPNLTSLNLASNNFSGNLPYSIASMVSLSYLNVSRNSLTQSIGDIFGNLAGLATLDLS 716 L+LS+ + + S+ T+ DV A+ L+ +L +P VL W + GDPCGE+W+G+ C S ++SI ++ L G +G L+ S+R D S N I +IP LP L L++N F+G++P S+ ++ L+ ++++ N L+ + D+F NL GL LD+S Sbjct: 15 LLLSLLIWIPSISLAATNPDDVAAINGLFAALGAP-VLPGWIASGGDPCGEAWQGIICNVSDIISITVNAANLQGELGDNLAKFTSIRGIDFSNNRIGGSIPSTLPVTLQHFFLSANQFTGSIPESLGTLSFLNDMSLNDNLLSGELPDVFQNLVGLINLDIS 176 HSP 2 Score: 43.1282 bits (100), Expect = 1.918e-31 Identity = 22/48 (45.83%), Postives = 31/48 (64.58%), Query Frame = 2 Query: 701 NLGPLFHNFSGDLPNSFISLFNISSLYLQNNQLTGSLNVFSGWPLTTL 844 NL +N SG LP S +L +++L +QNNQL+G+L+V G PL L Sbjct: 172 NLDISSNNISGTLPPSMENLLTLTTLRVQNNQLSGTLDVLQGLPLQDL 219
BLAST of FC873632 vs. ExPASy Swiss-Prot
Match: SUB_ARATH (Protein STRUBBELIG OS=Arabidopsis thaliana GN=SUB PE=1 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 1.218e-30 Identity = 64/169 (37.87%), Postives = 98/169 (57.99%), Query Frame = 3 Query: 219 DAFVLILSIFLTLSLVQCTTDSSDVQALQVLYTSLNSPSVLTNWKGNEGDPCGESWKGVACEGSAVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLPPNLTSLNLASNNFSGNLPYSIASMVSLSYLNVSRNSLTQSIGDIFGNLAGLATLDLSFTI 725 + F + + LT+ T+ DV A+ LY +L +PS L +W GDPCGE W+GV C+ S + I I G+ + G + L+D S++ D S N I TIP LP ++ +L+L+SN F+GN+P++++ + LS L++ N L+ I D F L+ L LDLS I Sbjct: 7 EVFFGLSVLALTMPFSAGVTNLRDVSAINNLYITLGAPS-LHHWLAFGGDPCGEKWQGVVCDSSNITEIRIPGMKVGGGLSDTLADFSSIQVMDFSSNHISGTIPQALPSSIRNLSLSSNRFTGNIPFTLSFLSDLSELSLGSNLLSGEIPDYFQQLSKLTKLDLSSNI 174 HSP 2 Score: 34.6538 bits (78), Expect = 1.218e-30 Identity = 18/38 (47.37%), Postives = 25/38 (65.79%), Query Frame = 2 Query: 731 GDLPNSFISLFNISSLYLQNNQLTGSLNVFSGWPLTTL 844 G LP+S L ++ LYLQ+N+LTG+L+V LT L Sbjct: 177 GHLPSSMGDLASLKILYLQDNKLTGTLDVIEDLFLTDL 214
BLAST of FC873632 vs. ExPASy Swiss-Prot
Match: SRF1_ARATH (Protein STRUBBELIG-RECEPTOR FAMILY 1 OS=Arabidopsis thaliana GN=SRF1 PE=2 SV=2) HSP 1 Score: 116.316 bits (290), Expect = 2.140e-25 Identity = 66/165 (40.00%), Postives = 99/165 (60.00%), Query Frame = 3 Query: 222 AFVLILSIFLTLSLVQCTTDSSDVQALQVLYTSLNSPSVLTNWKGNEGDPCGESWKGVACEGSAVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLPPNLTSLNLASNNFSGNLPYSIASMVSLSYLNVSRNSLTQSIGDIFGNLAGLATLDLS 716 +F LI L+L+L T+ DV A+ L+ +L SP +L W + GDPCGESW+GV C S V +I + L G +G L+ SL+ D S N I +IP LP +L +L L+ NNF+G +P S++S+ SLS ++++ N L+ I D+F +L + +DLS Sbjct: 19 SFALISLPSLSLAL----TNPDDVAAINSLFLALESP-LLPGWVASGGDPCGESWQGVLCNASQVETIILISANLGGELGVGLNMFTSLKAMDFSNNHIGGSIPSTLPVSLQNLFLSGNNFTGTIPESLSSLKSLSVMSLNNNLLSGKIPDVFQDLGLMINIDLS 178
BLAST of FC873632 vs. ExPASy Swiss-Prot
Match: PEPR2_ARATH (Leucine-rich repeat receptor-like protein kinase PEPR2 OS=Arabidopsis thaliana GN=PEPR2 PE=1 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 1.070e-16 Identity = 59/172 (34.30%), Postives = 93/172 (54.07%), Query Frame = 3 Query: 231 LILSIFLTLSLVQCTTDSSDVQALQVLYTSLNSP--SVLTNWKGN--EGDPCGESWKGVACE--GSAVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLPPNLTSL---NLASNNFSGNLPYSIASMVSLSYLNVSRNSLTQSIGDIFGNLAGLATLDLSF 719 L+ S+F+ + ++ +SD AL L + V + WK N E PC +W GV C+ G+ V ++++S GLSG +G + +L SL DLS NS +P L N TSL +L++N+FSG +P S+ +L++L + RN+L+ I G L L L +S+ Sbjct: 11 LLCSLFVYFRIDSVSSLNSDGLALLSLLKHFDKVPLEVASTWKENTSETTPCNNNWFGVICDLSGNVVETLNLSASGLSGQLGSEIGELKSLVTLDLSLNSFSGLLPSTLG-NCTSLEYLDLSNNDFSGEVPDIFGSLQNLTFLYLDRNNLSGLIPASVGGLIELVDLRMSY 181 HSP 2 Score: 26.5646 bits (57), Expect = 1.070e-16 Identity = 12/32 (37.50%), Postives = 18/32 (56.25%), Query Frame = 2 Query: 716 FHNFSGDLPNSFISLFNISSLYLQNNQLTGSL 811 ++N SG +P + + L L NN+L GSL Sbjct: 181 YNNLSGTIPELLGNCSKLEYLALNNNKLNGSL 212 The following BLAST results are available for this feature:
BLAST of FC873632 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 40
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Sequences
The
following sequences are available for this feature:
EST sequence >FC873632 ID=FC873632; Name=FC873632; organism=Citrus clementina; type=EST; length=844bpback to top |