FC875490
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC875490 vs. ExPASy Swiss-Prot
Match: SEC22_YARLI (Protein transport protein SEC22 OS=Yarrowia lipolytica GN=SEC22 PE=3 SV=1) HSP 1 Score: 162.54 bits (410), Expect = 1.865e-39 Identity = 80/182 (43.96%), Postives = 126/182 (69.23%), Query Frame = 1 Query: 145 MVKMTMIARVTDGLPLAEGLDDGRDLRDAEMYKQQVKALFKNLSRGQNEASRMSIETGPYVFHYIIEGRVCYLTMCDRAYPKKLAFQYLEDLKNEFERVNGAQ-IETAARPYAFIKFDTFIQKTKKLYQDTRTQRNIAKLNDELYEVHQIMTRNVQEVLGVGEKLDQVSEMSSRLTSESRIY 687 MV T+I R +DGLPL+ +DDG++ + K+Q K + + LS N A R SIE+G YV HY+++ + Y + + +YP+KLAF YL++L EF++ +G + ++ RPY F++FDTF+QKTK++YQDTR N+ KLN EL +V ++MT+N++++L G LD +S++SS L +ES+ Y Sbjct: 1 MVLSTLIMRASDGLPLSASVDDGQE--NLSEQKKQCKLVTQKLSA--NSADRASIESGNYVIHYLMKDGIVYYCISESSYPRKLAFSYLDELDREFQKSHGQEALKEGVRPYKFVEFDTFMQKTKRVYQDTRATHNLDKLNTELQDVTRVMTKNIEDLLHRGHSLDHMSDLSSNLRTESKKY 178
BLAST of FC875490 vs. ExPASy Swiss-Prot
Match: SEC22_SCHPO (Protein transport protein sec22 OS=Schizosaccharomyces pombe GN=sec22 PE=2 SV=1) HSP 1 Score: 149.828 bits (377), Expect = 1.251e-35 Identity = 73/169 (43.20%), Postives = 113/169 (66.86%), Query Frame = 1 Query: 184 LPLAEGLDDGRDLRDAEMYKQQVKALFKNLSRGQNEASRMSIETGPYVFHYIIEGRVCYLTMCDRAYPKKLAFQYLEDLKNEFERVNGAQ-IETAARPYAFIKFDTFIQKTKKLYQDTRTQRNIAKLNDELYEVHQIMTRNVQEVLGVGEKLDQVSEMSSRLTSESRIY 687 LPLA +DD R+ E +K+Q K + K LS R SIE+G Y FHY+I+ +CYL +C+++YP+KLAF YLE+L EF G + ++ RPYAF++FDTF+QK+K++Y R N+ KLN EL +V ++MT+N++++L G+ L++++++SS L S Y Sbjct: 7 LPLAASVDDESTERNLESHKKQAKLILKRLS--PTSEKRASIESGDYTFHYLIDNGICYLCICEQSYPRKLAFSYLEELAGEFWNSFGEEALQPGLRPYAFVQFDTFMQKSKRVYNTPRANDNLDKLNTELKDVTRVMTKNIEDLLYRGDSLEKMADLSSDLRYSSAKY 173
BLAST of FC875490 vs. ExPASy Swiss-Prot
Match: SEC22_ASHGO (Protein transport protein SEC22 OS=Ashbya gossypii GN=SEC22 PE=3 SV=1) HSP 1 Score: 144.05 bits (362), Expect = 6.864e-34 Identity = 74/182 (40.66%), Postives = 118/182 (64.84%), Query Frame = 1 Query: 145 MVKMTMIARVTDGLPLAEGLDDGRDLRDAEMYKQQVKALFKNLSRGQNEASRMSIETGPYVFHYIIEGRVCYLTMCDRAYPKKLAFQYLEDLKNEFERVNGAQ-IETAARPYAFIKFDTFIQKTKKLYQDTRTQRNIAKLNDELYEVHQIMTRNVQEVLGVGEKLDQVSEMSSRLTSESRIY 687 M+K T+I R DGLPL +DD D A+ K++VK L + A+ ++E+G Y HY+ + V Y+ + +R YP+ LAF YL ++++EFE G + ++ + RPYAF+ FD F+QKTKK+Y D R Q N+ +LN +L V QIMT+N++++L G+ LD++S++S+ L +S+ Y Sbjct: 1 MIKSTLIFR-DDGLPLCSSVDDDTDPSLADQ-KKKVKVLISRFT--PQSANEATLESGAYEMHYVRQQSVVYIVIVERGYPRNLAFAYLANVRHEFEHSYGNEYVKPSVRPYAFVSFDNFLQKTKKIYNDKRVQGNLDQLNSDLLGVKQIMTKNIEDLLYRGDSLDRMSDLSASLRQDSKKY 178
BLAST of FC875490 vs. ExPASy Swiss-Prot
Match: SEC22_KLULA (Protein transport protein SEC22 OS=Kluyveromyces lactis GN=SEC22 PE=3 SV=1) HSP 1 Score: 139.043 bits (349), Expect = 2.208e-32 Identity = 74/182 (40.66%), Postives = 113/182 (62.09%), Query Frame = 1 Query: 145 MVKMTMIARVTDGLPLAEGLDDGRDLRDAEMYKQQVKALFKNLSRGQNEASRMSIETGPYVFHYIIEGRVCYLTMCDRAYPKKLAFQYLEDLKNEFERVNGAQIETA-ARPYAFIKFDTFIQKTKKLYQDTRTQRNIAKLNDELYEVHQIMTRNVQEVLGVGEKLDQVSEMSSRLTSESRIY 687 M++ T+I R DGLPL +DD D E K++VK L + A+ ++E+G + HYI V Y+ + +R YP+ LAF YL D++ EFE G Q+ + RPY F+ FD F+QKTKK+Y D R Q N+ +LN +L V QIMT+N++++L G+ LD++S+MS+ L +++ Y Sbjct: 1 MIRSTLIFR-EDGLPLCASVDDDTDPSLQEQ-KKKVKILISRFT--PTSANEATVESGDFEIHYIRLNTVVYIVVAERNYPRNLAFSYLADIQQEFEHSYGGQLSKSNVRPYEFVSFDNFLQKTKKVYNDKRVQGNMDQLNQDLKGVKQIMTKNIEDLLYRGDSLDKMSDMSASLRQDAKKY 178
BLAST of FC875490 vs. ExPASy Swiss-Prot
Match: SEC22_YEAST (Protein transport protein SEC22 OS=Saccharomyces cerevisiae GN=SEC22 PE=1 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 4.604e-30 Identity = 72/182 (39.56%), Postives = 108/182 (59.34%), Query Frame = 1 Query: 145 MVKMTMIARVTDGLPLAEGLDDGRDLRDAEMYKQQVKALFKNLSRGQNEASRMSIETGPYVFHYIIEGRVCYLTMCDRAYPKKLAFQYLEDLKNEFERVNGAQI-ETAARPYAFIKFDTFIQKTKKLYQDTRTQRNIAKLNDELYEVHQIMTRNVQEVLGVGEKLDQVSEMSSRLTSESRIY 687 M+K T+I R DGLPL +D+ D E KQ+VK + L+ A+ ++E+G + HY+ + V Y +C+ YP+ LAF YL D+ EFE + + RPY F+ FD F+Q TKK Y D + Q N+ +LN EL V QIM++N++++L G+ LD++S+MSS L S+ Y Sbjct: 1 MIKSTLIYR-EDGLPLCTSVDNENDPSLFEQ-KQKVKIVVSRLT--PQSATEATLESGSFEIHYLKKSMVYYFVICESGYPRNLAFSYLNDIAQEFEHSFANEYPKPTVRPYQFVNFDNFLQMTKKSYSDKKVQDNLDQLNQELVGVKQIMSKNIEDLLYRGDSLDKMSDMSSSLKETSKRY 178
BLAST of FC875490 vs. ExPASy Swiss-Prot
Match: SEC22_CANGA (Protein transport protein SEC22 OS=Candida glabrata GN=SEC22 PE=3 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 9.600e-28 Identity = 66/182 (36.26%), Postives = 106/182 (58.24%), Query Frame = 1 Query: 145 MVKMTMIARVTDGLPLAEGLDDGRDLRDAEMYKQQVKALFKNLSRGQNEASRMSIETGPYVFHYIIEGRVCYLTMCDRAYPKKLAFQYLEDLKNEFERVNGAQI-ETAARPYAFIKFDTFIQKTKKLYQDTRTQRNIAKLNDELYEVHQIMTRNVQEVLGVGEKLDQVSEMSSRLTSESRIY 687 M+K T++ R DGLPL +DD D+ D + +Q+ + A+ ++E+ HYI + V Y +C+ YP+ LAF YL D+ EF+ ++ + RPYAF FDTF+Q+TKK Y D + Q N+ +LN EL V QIM++N++++L G+ L+++ +MS+ L S+ Y Sbjct: 1 MIKSTVVYR-DDGLPLCSSVDD--DISDLSLNEQKKRIKMVVSRMTPQSANEATLESKDSEIHYIRQQGVIYFVICEAGYPRNLAFSYLNDVAVEFQHSYSNELSKPTIRPYAFASFDTFLQRTKKAYSDKKVQDNLDQLNQELVGVKQIMSKNIEDLLYRGDSLEKMDDMSNSLKISSKKY 179
BLAST of FC875490 vs. ExPASy Swiss-Prot
Match: SC22A_MOUSE (Vesicle-trafficking protein SEC22a OS=Mus musculus GN=Sec22a PE=2 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.301e-16 Identity = 52/148 (35.14%), Postives = 78/148 (52.70%), Query Frame = 1 Query: 145 MVKMTMIARVTDGLPLAEGLDDGRDLRDAEMYKQQVKALFKNLSRGQNE-ASRMSIETGPYVFHYIIEGRVCYLTMCDRAYPKKLAFQYLEDLKNEF-ERVNGAQIETAARPYAFIKFDTFIQKTKKLYQDTRTQRNIAKLNDELYEV 582 M+ + RV DGLPL+ D + Q+ + FK LSR + R +++TG Y ++I V Y+ +C YP LAF +L++L+ EF N + TA RPY FI+FD FIQ+TK+ Y + R+ L+D E+ Sbjct: 3 MILSASVIRVRDGLPLSASTD-----YEQSTGMQECRKYFKMLSRKLAQFPDRCTLKTGRYNINFISSLGVSYMMLCSENYPNVLAFSFLDELQKEFITTYNMMKTNTAVRPYCFIEFDNFIQRTKQRYNNPRSLSTKINLSDMQMEI 145
BLAST of FC875490 vs. ExPASy Swiss-Prot
Match: SC22A_HUMAN (Vesicle-trafficking protein SEC22a OS=Homo sapiens GN=SEC22A PE=1 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 2.218e-16 Identity = 52/148 (35.14%), Postives = 78/148 (52.70%), Query Frame = 1 Query: 145 MVKMTMIARVTDGLPLAEGLDDGRDLRDAEMYKQQVKALFKNLSRGQNEA-SRMSIETGPYVFHYIIEGRVCYLTMCDRAYPKKLAFQYLEDLKNEF-ERVNGAQIETAARPYAFIKFDTFIQKTKKLYQDTRTQRNIAKLNDELYEV 582 M+ + RV DGLPL+ D + Q+ + FK LSR + R +++TG Y ++I V Y+ +C YP LAF +L++L+ EF N + TA RPY FI+FD FIQ+TK+ Y + R+ L+D E+ Sbjct: 3 MILSASVIRVRDGLPLSASTD-----YEQSTGMQECRKYFKMLSRKLAQLPDRCTLKTGHYNINFISSLGVSYMMLCTENYPNVLAFSFLDELQKEFITTYNMMKTNTAVRPYCFIEFDNFIQRTKQRYNNPRSLSTKINLSDMQTEI 145
BLAST of FC875490 vs. ExPASy Swiss-Prot
Match: SC22A_MACFA (Vesicle-trafficking protein SEC22a OS=Macaca fascicularis GN=SEC22A PE=2 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 3.784e-16 Identity = 52/148 (35.14%), Postives = 78/148 (52.70%), Query Frame = 1 Query: 145 MVKMTMIARVTDGLPLAEGLDDGRDLRDAEMYKQQVKALFKNLSRGQNEA-SRMSIETGPYVFHYIIEGRVCYLTMCDRAYPKKLAFQYLEDLKNEF-ERVNGAQIETAARPYAFIKFDTFIQKTKKLYQDTRTQRNIAKLNDELYEV 582 M+ + RV DGLPL+ D + Q+ + FK LSR + R +++TG Y ++I V Y+ +C YP LAF +L++L+ EF N + TA RPY FI+FD FIQ+TK+ Y + R+ L+D E+ Sbjct: 3 MILSASVIRVRDGLPLSASTD-----YEQSTGMQECRKYFKMLSRKLAQLPDRCTLKTGHYNINFISSLGVSYMMLCTDNYPNVLAFSFLDELQKEFITTYNMMKTNTAVRPYCFIEFDNFIQRTKQRYNNPRSLSTKINLSDMQTEI 145
BLAST of FC875490 vs. ExPASy Swiss-Prot
Match: SC22A_RAT (Vesicle-trafficking protein SEC22a OS=Rattus norvegicus GN=Sec22a PE=2 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 8.430e-16 Identity = 51/148 (34.46%), Postives = 78/148 (52.70%), Query Frame = 1 Query: 145 MVKMTMIARVTDGLPLAEGLDDGRDLRDAEMYKQQVKALFKNLSRGQNE-ASRMSIETGPYVFHYIIEGRVCYLTMCDRAYPKKLAFQYLEDLKNEF-ERVNGAQIETAARPYAFIKFDTFIQKTKKLYQDTRTQRNIAKLNDELYEV 582 M+ + RV DGLPL+ D + Q+ + FK LSR + R +++TG + ++I V Y+ +C YP LAF +L++L+ EF N + TA RPY FI+FD FIQ+TK+ Y + R+ L+D E+ Sbjct: 3 MILSASVVRVRDGLPLSASTDC-----EQSAGVQECRKYFKMLSRKLAQFPDRCTLKTGRHNINFISSLGVSYMMLCTENYPNVLAFSFLDELQKEFITTYNMMKTNTAVRPYCFIEFDNFIQRTKQRYNNPRSLSTKINLSDMQMEI 145 The following BLAST results are available for this feature:
BLAST of FC875490 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 22
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Sequences
The
following sequences are available for this feature:
EST sequence >FC875490 ID=FC875490; Name=FC875490; organism=Citrus clementina; type=EST; length=689bpback to top |