FC875490
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC875490 vs. ExPASy Swiss-Prot
Match: SEC22_ARATH (25.3 kDa vesicle transport protein OS=Arabidopsis thaliana GN=SEC22 PE=2 SV=1) HSP 1 Score: 347.821 bits (891), Expect = 3.130e-95 Identity = 172/181 (95.03%), Postives = 178/181 (98.34%), Query Frame = 1 Query: 145 MVKMTMIARVTDGLPLAEGLDDGRDLRDAEMYKQQVKALFKNLSRGQNEASRMSIETGPYVFHYIIEGRVCYLTMCDRAYPKKLAFQYLEDLKNEFERVNGAQIETAARPYAFIKFDTFIQKTKKLYQDTRTQRNIAKLNDELYEVHQIMTRNVQEVLGVGEKLDQVSEMSSRLTSESRIY 687 MVKMT+IARVTDGLPLAEGLDDGRDL D++MYKQQVKALFKNLSRGQN+ASRMS+ETGPYVFHYIIEGRVCYLTMCDR+YPKKLAFQYLEDLKNEFERVNG IETAARPYAFIKFDTFIQKTKKLYQDTRTQRNIAKLNDELYEVHQIMTRNVQEVLGVGEKLDQVSEMSSRLTSESRIY Sbjct: 1 MVKMTLIARVTDGLPLAEGLDDGRDLPDSDMYKQQVKALFKNLSRGQNDASRMSVETGPYVFHYIIEGRVCYLTMCDRSYPKKLAFQYLEDLKNEFERVNGPNIETAARPYAFIKFDTFIQKTKKLYQDTRTQRNIAKLNDELYEVHQIMTRNVQEVLGVGEKLDQVSEMSSRLTSESRIY 181
BLAST of FC875490 vs. ExPASy Swiss-Prot
Match: SC22B_RAT (Vesicle-trafficking protein SEC22b OS=Rattus norvegicus GN=Sec22b PE=1 SV=3) HSP 1 Score: 182.57 bits (462), Expect = 1.741e-45 Identity = 91/182 (50.00%), Postives = 127/182 (69.78%), Query Frame = 1 Query: 145 MVKMTMIARVTDGLPLAEGL-DDGRDLRDAEMYKQQVKALFKNLSRGQNEASRMSIETGPYVFHYIIEGRVCYLTMCDRAYPKKLAFQYLEDLKNEFERVNGAQIETAARPYAFIKFDTFIQKTKKLYQDTRTQRNIAKLNDELYEVHQIMTRNVQEVLGVGEKLDQVSEMSSRLTSESRIY 687 MV +TMIARV DGLPLA + +D + RD + Y+ Q K LF+ L+ + +R ++E G FHYIIE VCYL +C+ A+PKKLAF YLEDL +EF+ +G ++ T +RPY+FI+FDTFIQKTKKLY D+R +RN+ +N EL +V +IM N++EVL GE L + ++ L+S S+ Y Sbjct: 1 MVLLTMIARVADGLPLAASMQEDEQSGRDLQQYQSQAKQLFRKLN--EQSPTRCTLEAGAMTFHYIIEQGVCYLVLCEAAFPKKLAFAYLEDLHSEFDEQHGKKVPTVSRPYSFIEFDTFIQKTKKLYIDSRARRNLGSINTELQDVQRIMVANIEEVLQRGEALSALDSKANNLSSLSKKY 180
BLAST of FC875490 vs. ExPASy Swiss-Prot
Match: SC22B_PONAB (Vesicle-trafficking protein SEC22b OS=Pongo abelii GN=SEC22B PE=2 SV=3) HSP 1 Score: 182.57 bits (462), Expect = 1.741e-45 Identity = 91/182 (50.00%), Postives = 127/182 (69.78%), Query Frame = 1 Query: 145 MVKMTMIARVTDGLPLAEGL-DDGRDLRDAEMYKQQVKALFKNLSRGQNEASRMSIETGPYVFHYIIEGRVCYLTMCDRAYPKKLAFQYLEDLKNEFERVNGAQIETAARPYAFIKFDTFIQKTKKLYQDTRTQRNIAKLNDELYEVHQIMTRNVQEVLGVGEKLDQVSEMSSRLTSESRIY 687 MV +TMIARV DGLPLA + +D + RD + Y+ Q K LF+ L+ + +R ++E G FHYIIE VCYL +C+ A+PKKLAF YLEDL +EF+ +G ++ T +RPY+FI+FDTFIQKTKKLY D+R +RN+ +N EL +V +IM N++EVL GE L + ++ L+S S+ Y Sbjct: 1 MVLLTMIARVADGLPLAASMQEDEQSGRDLQQYQSQAKQLFRKLN--EQSPTRCTLEAGAMTFHYIIEQGVCYLVLCEAAFPKKLAFAYLEDLHSEFDEQHGKKVPTVSRPYSFIEFDTFIQKTKKLYIDSRARRNLGSINTELQDVQRIMVANIEEVLQRGEALSALDSKANNLSSLSKKY 180
BLAST of FC875490 vs. ExPASy Swiss-Prot
Match: SC22B_MOUSE (Vesicle-trafficking protein SEC22b OS=Mus musculus GN=Sec22b PE=1 SV=3) HSP 1 Score: 182.57 bits (462), Expect = 1.741e-45 Identity = 91/182 (50.00%), Postives = 127/182 (69.78%), Query Frame = 1 Query: 145 MVKMTMIARVTDGLPLAEGL-DDGRDLRDAEMYKQQVKALFKNLSRGQNEASRMSIETGPYVFHYIIEGRVCYLTMCDRAYPKKLAFQYLEDLKNEFERVNGAQIETAARPYAFIKFDTFIQKTKKLYQDTRTQRNIAKLNDELYEVHQIMTRNVQEVLGVGEKLDQVSEMSSRLTSESRIY 687 MV +TMIARV DGLPLA + +D + RD + Y+ Q K LF+ L+ + +R ++E G FHYIIE VCYL +C+ A+PKKLAF YLEDL +EF+ +G ++ T +RPY+FI+FDTFIQKTKKLY D+R +RN+ +N EL +V +IM N++EVL GE L + ++ L+S S+ Y Sbjct: 1 MVLLTMIARVADGLPLAASMQEDEQSGRDLQQYQSQAKQLFRKLN--EQSPTRCTLEAGAMTFHYIIEQGVCYLVLCEAAFPKKLAFAYLEDLHSEFDEQHGKKVPTVSRPYSFIEFDTFIQKTKKLYIDSRARRNLGSINTELQDVQRIMVANIEEVLQRGEALSALDSKANNLSSLSKKY 180
BLAST of FC875490 vs. ExPASy Swiss-Prot
Match: SC22B_HUMAN (Vesicle-trafficking protein SEC22b OS=Homo sapiens GN=SEC22B PE=1 SV=3) HSP 1 Score: 182.57 bits (462), Expect = 1.741e-45 Identity = 91/182 (50.00%), Postives = 127/182 (69.78%), Query Frame = 1 Query: 145 MVKMTMIARVTDGLPLAEGL-DDGRDLRDAEMYKQQVKALFKNLSRGQNEASRMSIETGPYVFHYIIEGRVCYLTMCDRAYPKKLAFQYLEDLKNEFERVNGAQIETAARPYAFIKFDTFIQKTKKLYQDTRTQRNIAKLNDELYEVHQIMTRNVQEVLGVGEKLDQVSEMSSRLTSESRIY 687 MV +TMIARV DGLPLA + +D + RD + Y+ Q K LF+ L+ + +R ++E G FHYIIE VCYL +C+ A+PKKLAF YLEDL +EF+ +G ++ T +RPY+FI+FDTFIQKTKKLY D+R +RN+ +N EL +V +IM N++EVL GE L + ++ L+S S+ Y Sbjct: 1 MVLLTMIARVADGLPLAASMQEDEQSGRDLQQYQSQAKQLFRKLN--EQSPTRCTLEAGAMTFHYIIEQGVCYLVLCEAAFPKKLAFAYLEDLHSEFDEQHGKKVPTVSRPYSFIEFDTFIQKTKKLYIDSRARRNLGSINTELQDVQRIMVANIEEVLQRGEALSALDSKANNLSSLSKKY 180
BLAST of FC875490 vs. ExPASy Swiss-Prot
Match: SC22B_CHICK (Vesicle-trafficking protein SEC22b OS=Gallus gallus GN=SEC22B PE=2 SV=1) HSP 1 Score: 182.185 bits (461), Expect = 2.274e-45 Identity = 90/182 (49.45%), Postives = 128/182 (70.33%), Query Frame = 1 Query: 145 MVKMTMIARVTDGLPLAEGL-DDGRDLRDAEMYKQQVKALFKNLSRGQNEASRMSIETGPYVFHYIIEGRVCYLTMCDRAYPKKLAFQYLEDLKNEFERVNGAQIETAARPYAFIKFDTFIQKTKKLYQDTRTQRNIAKLNDELYEVHQIMTRNVQEVLGVGEKLDQVSEMSSRLTSESRIY 687 MV +TMIARV DGLPLA + +D + RD + Y+ Q K LF+ L+ + +R ++E G FHYIIE VCYL +C+ A+PKKLAF YLEDL++EF+ +G ++ T +RPY+FI+FDT+IQKTKKLY D+R +RN+ +N EL +V +IM N++EVL GE L + ++ L+S S+ Y Sbjct: 1 MVLLTMIARVADGLPLAASMQEDEQSGRDLQQYQSQAKQLFRKLN--EQSPTRCTLEAGAMAFHYIIEKGVCYLVLCEAAFPKKLAFAYLEDLQSEFDEQHGKKVPTVSRPYSFIEFDTYIQKTKKLYIDSRARRNLGSINTELQDVQRIMVANIEEVLQRGEALSALDSKANNLSSLSKKY 180
BLAST of FC875490 vs. ExPASy Swiss-Prot
Match: SC22B_CRIGR (Vesicle-trafficking protein SEC22b OS=Cricetulus griseus GN=Sec22b PE=1 SV=3) HSP 1 Score: 179.874 bits (455), Expect = 1.129e-44 Identity = 90/182 (49.45%), Postives = 126/182 (69.23%), Query Frame = 1 Query: 145 MVKMTMIARVTDGLPLAEGL-DDGRDLRDAEMYKQQVKALFKNLSRGQNEASRMSIETGPYVFHYIIEGRVCYLTMCDRAYPKKLAFQYLEDLKNEFERVNGAQIETAARPYAFIKFDTFIQKTKKLYQDTRTQRNIAKLNDELYEVHQIMTRNVQEVLGVGEKLDQVSEMSSRLTSESRIY 687 MV +TMIARV DGLPLA + +D + RD + Y+ Q K LF+ L+ + +R ++ G FHYIIE VCYL +C+ A+PKKLAF YLEDL +EF+ +G ++ T +RPY+FI+FDTFIQKTKKLY D+R +RN+ +N EL +V +IM N++EVL GE L + ++ L+S S+ Y Sbjct: 1 MVLLTMIARVADGLPLAASMQEDEQSGRDLQQYQSQAKQLFRKLN--EQSPTRCTLGAGAMTFHYIIEQGVCYLVLCEAAFPKKLAFAYLEDLHSEFDEQHGKKVPTVSRPYSFIEFDTFIQKTKKLYIDSRARRNLGSINTELQDVQRIMVANIEEVLQRGEALSALDSKANNLSSLSKKY 180
BLAST of FC875490 vs. ExPASy Swiss-Prot
Match: S22BB_DANRE (Vesicle-trafficking protein SEC22b-B OS=Danio rerio GN=sec22bb PE=2 SV=1) HSP 1 Score: 175.637 bits (444), Expect = 2.129e-43 Identity = 86/182 (47.25%), Postives = 124/182 (68.13%), Query Frame = 1 Query: 145 MVKMTMIARVTDGLPLAEGLDDGRDL-RDAEMYKQQVKALFKNLSRGQNEASRMSIETGPYVFHYIIEGRVCYLTMCDRAYPKKLAFQYLEDLKNEFERVNGAQIETAARPYAFIKFDTFIQKTKKLYQDTRTQRNIAKLNDELYEVHQIMTRNVQEVLGVGEKLDQVSEMSSRLTSESRIY 687 MV +TMIAR+ DGLPLA + + + RD + Y+ Q K LF+ L+ + +R ++E G FHY+IE VCYL +C+ +PKKLAF YLEDL+ EF +G ++ T +RPY+FI+FDT+IQKTKK Y D+R +RN++ +N EL +V +IM N++EVL GE L + +S L+S S+ Y Sbjct: 1 MVLLTMIARLADGLPLAASMQEDEQMGRDLQQYQSQAKQLFRKLN--EQSPNRCTLEAGSMSFHYVIEKGVCYLVLCEAGFPKKLAFAYLEDLQAEFHEQHGKKVPTVSRPYSFIEFDTYIQKTKKSYIDSRARRNLSNINTELQDVQRIMVANIEEVLQRGEALSALDSKASNLSSLSKKY 180
BLAST of FC875490 vs. ExPASy Swiss-Prot
Match: SC22B_XENTR (Vesicle-trafficking protein SEC22b OS=Xenopus tropicalis GN=sec22b PE=2 SV=1) HSP 1 Score: 174.866 bits (442), Expect = 3.631e-43 Identity = 87/182 (47.80%), Postives = 126/182 (69.23%), Query Frame = 1 Query: 145 MVKMTMIARVTDGLPLAEGL-DDGRDLRDAEMYKQQVKALFKNLSRGQNEASRMSIETGPYVFHYIIEGRVCYLTMCDRAYPKKLAFQYLEDLKNEFERVNGAQIETAARPYAFIKFDTFIQKTKKLYQDTRTQRNIAKLNDELYEVHQIMTRNVQEVLGVGEKLDQVSEMSSRLTSESRIY 687 MV +TMIARV DGLPLA + +D + RD + Y+ Q K LF+ L+ + +R ++E G FHY+IE VCYL +C+ A+PKKLAF YLEDL +EF+ +G ++ T +RPY+FI+FD +IQKTKK Y D+R +RN++ +N EL +V +IM N++EVL GE L + +S L++ S+ Y Sbjct: 1 MVLLTMIARVADGLPLAASMQEDEQSGRDLQQYQNQAKQLFRKLN--EQSPTRCTLEAGAMTFHYLIEKGVCYLVLCEAAFPKKLAFAYLEDLFSEFDEQHGKKVPTVSRPYSFIEFDNYIQKTKKSYIDSRARRNLSSVNTELQDVQRIMVANIEEVLLRGEALSALDSKASNLSTLSKKY 180
BLAST of FC875490 vs. ExPASy Swiss-Prot
Match: S22BA_DANRE (Vesicle-trafficking protein SEC22b-A OS=Danio rerio GN=sec22ba PE=2 SV=1) HSP 1 Score: 167.162 bits (422), Expect = 7.572e-41 Identity = 84/182 (46.15%), Postives = 120/182 (65.93%), Query Frame = 1 Query: 145 MVKMTMIARVTDGLPLAEGL-DDGRDLRDAEMYKQQVKALFKNLSRGQNEASRMSIETGPYVFHYIIEGRVCYLTMCDRAYPKKLAFQYLEDLKNEFERVNGAQIETAARPYAFIKFDTFIQKTKKLYQDTRTQRNIAKLNDELYEVHQIMTRNVQEVLGVGEKLDQVSEMSSRLTSESRIY 687 MV TMI RV D LPLA + +D + RD + Y+ Q K L + L+ + +R ++E G FHY+IE VCYL +C+ +PKKLAF YLEDL+ EF GA++ + +RPY+FI+FDT+IQKT K Y D+R +RN+ +N EL++V +IM N++EVL GE L + +S L+S S+ Y Sbjct: 1 MVLQTMIVRVADSLPLAASMQEDEQSGRDLQKYQSQAKQLCRKLN--EQSPARCTLEAGKMCFHYVIEKGVCYLALCEAGFPKKLAFAYLEDLEGEFSEQYGAKVPSVSRPYSFIEFDTYIQKTIKSYIDSRARRNLGNINSELHDVQRIMVANIEEVLQRGEALSALDSKASNLSSLSKKY 180 The following BLAST results are available for this feature:
BLAST of FC875490 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 22
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Sequences
The
following sequences are available for this feature:
EST sequence >FC875490 ID=FC875490; Name=FC875490; organism=Citrus clementina; type=EST; length=689bpback to top |