FC875490
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC875490 vs. ExPASy Swiss-Prot
Match: YKT6_SCHPO (Synaptobrevin homolog ykt6 OS=Schizosaccharomyces pombe GN=ykt6 PE=2 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 4.329e-12 Identity = 42/143 (29.37%), Postives = 74/143 (51.75%), Query Frame = 1 Query: 265 KNLSRGQNEASRMSIETGPYVFH-YIIEGRVCYLTMCDRAYPKKLAFQYLEDLKNEFERVNG-AQIETAARPYAFIKFDTFIQKTKKLYQDTRTQRNIAKLNDELYEVHQIMTRNVQEVLGVGEKLDQVSEMSSRLTSESRIY 687 K ++ N R +E YVFH Y +C + D+ YP ++A+ L + +EF N + E+ A +F + DT++ K YQD + I ++ EL E ++ + ++ VL GEKLD + + S L+++SR++ Sbjct: 45 KTVAERTNPGQRQDVEQSNYVFHVYNRSDGLCGVIASDKEYPLRVAYTLLNKILDEFLTKNPRTKWESGAVTLSFPELDTYLSK----YQDPKQADTIMRVQQELDETKDVLHKTIESVLARGEKLDDLIQRSDNLSTQSRMF 183
BLAST of FC875490 vs. ExPASy Swiss-Prot
Match: VAMP7_CHICK (Vesicle-associated membrane protein 7 OS=Gallus gallus GN=VAMP7 PE=2 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 7.385e-12 Identity = 38/137 (27.74%), Postives = 75/137 (54.74%), Query Frame = 1 Query: 271 LSRGQNEASRMSIETGPYVFHYIIEGRVCYLTMCDRAYPKKLAFQYLEDLKNEFERVNGAQIETAARPYAF-IKFDTFIQKTKKLYQDTRTQRNIAKLNDELYEVHQIMTRNVQEVLGVGEKLDQVSEMSSRLTSES 678 L++ +E ++++ G Y+FHYI + R+ YL + D + + AF +L ++K F+ G++ +TA PYA +F + + K + +++ +A+ ++ E+ IM RN+ V GEKL+ + + + L S Sbjct: 33 LAKIPSENNKLTYSHGNYLFHYICQDRIIYLCITDDDFERSRAFNFLNEIKKRFQTTYGSRAQTAL-PYAMNSEFSSVLAAQLKYHSESKGTDQVAETQAQVDELKGIMVRNIDLVAQRGEKLELLIDKTENLVDSS 168 The following BLAST results are available for this feature:
BLAST of FC875490 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 22
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC875490 ID=FC875490; Name=FC875490; organism=Citrus clementina; type=EST; length=689bpback to top |