FC876215
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC876215 vs. ExPASy Swiss-Prot
Match: CHI1_THECC (Endochitinase 1 OS=Theobroma cacao GN=CHIA1 PE=2 SV=1) HSP 1 Score: 228.794 bits (582), Expect = 2.155e-59 Identity = 119/211 (56.40%), Postives = 144/211 (68.25%), Query Frame = 3 Query: 96 GSAGNCG---SGVVCPGGECCSRFGWCGLTIDHCC--DGCQSNCNQVVCGECDPDDGTAGDGGELGKIISREMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTCHETTG--GWPDAPGGEYAWGYCFNREVGAASSDYC--DPNYPCR-GK-YYGRGPIQLTWNLHYLRCGEGLGRGEDFVDNPDLL 695 GSA CG G +CPGG CCS+FGWCG T D+C +GCQS C+ G+ GD G L +I+RE F+ +L +RND CPAR FYTYDAFI AAK+FPAF +G++ RKRE+AAF AQT HETTG GW AP G Y WGYC+NRE+ A DYC DPNYPC GK Y+GRGP+QLTWN +Y +CG + G D ++NPDLL Sbjct: 19 GSAEQCGRQAGGALCPGGLCCSQFGWCGNTDDYCKKENGCQSQCS-----------GSGGDTGGLDSLITRERFDQMLLHRNDGGCPARGFYTYDAFIAAAKSFPAFATTGDDATRKREVAAFLAQTSHETTGGAGWA-APDGPYTWGYCYNRELNPA--DYCQWDPNYPCAPGKQYFGRGPMQLTWNYNYGQCGRAI--GVDLLNNPDLL 213
BLAST of FC876215 vs. ExPASy Swiss-Prot
Match: CHIB_VITVI (Basic endochitinase OS=Vitis vinifera GN=CHIT1B PE=2 SV=1) HSP 1 Score: 228.409 bits (581), Expect = 2.815e-59 Identity = 111/207 (53.62%), Postives = 140/207 (67.63%), Query Frame = 3 Query: 96 GSAGNCGS---GVVCPGGECCSRFGWCGLTIDHCCDGCQSNCNQVVCGECDPDDGTAGDGGELGKIISREMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTCHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCDPN--YPCRG--KYYGRGPIQLTWNLHYLRCGEGLGRGEDFVDNPDLL 695 GSA CG G VCPGG CCS+FGWCG T D+C GCQS C+ G++G++I+R MF D+L++RN+ CP + FYTYDAFI AAKAFP FG +G+ T RKREIAAF AQT HETTGGW AP G YAWGYC+ RE G+ + YC P+ +PC KYYGRGPIQ+++N +Y + G+ + G D V+NPDL+ Sbjct: 18 GSAEQCGGQAGGRVCPGGACCSKFGWCGNTADYCGSGCQSQCSST---------------GDIGQLITRSMFNDMLKHRNEGSCPGKGFYTYDAFIAAAKAFPGFGTTGDTTTRKREIAAFLAQTSHETTGGWASAPDGPYAWGYCYLREQGSPGA-YCVPSAQWPCAAGRKYYGRGPIQISYNYNYGQAGKAI--GVDLVNNPDLV 206
BLAST of FC876215 vs. ExPASy Swiss-Prot
Match: CHI6_POPTR (Acidic endochitinase WIN6 OS=Populus trichocarpa GN=WIN6 PE=2 SV=2) HSP 1 Score: 226.483 bits (576), Expect = 1.070e-58 Identity = 114/201 (56.72%), Postives = 134/201 (66.67%), Query Frame = 3 Query: 96 GSAGNCG---SGVVCPGGECCSRFGWCGLTIDHCCDGCQSNCNQVVCGE-----CDPDDGTAGDG--GELGKIISREMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTCHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCDP--NYPC-RGKYY-GRGPIQLTWNLHYLRCGEGL 656 GSA CG +CPGG CCS +GWCG T+D+C GCQS C+ G+ CD D GDG G L II + F+ LL++RND RCPA FYTY+AFI AAK FP FGN+G++ MRKREIAAF QT HETTGGWPDAP G YAWGYC+ +E+ YCDP NY C GK Y GRGPIQL+WN +Y CG+ L Sbjct: 20 GSAEQCGRQAGDALCPGGLCCSSYGWCGTTVDYCGIGCQSQCDGGGGGDGGDDGCDGGDDGGGDGDDGYLSDIIPKSKFDALLKFRNDARCPAAGFYTYNAFISAAKEFPDFGNTGDDLMRKREIAAFLGQTSHETTGGWPDAPCGPYAWGYCYLKEINC--QPYCDPSSNYQCVAGKQYCGRGPIQLSWNYNYGLCGDDL 218
BLAST of FC876215 vs. ExPASy Swiss-Prot
Match: CHI1_GOSHI (Endochitinase 1 OS=Gossypium hirsutum PE=3 SV=1) HSP 1 Score: 224.557 bits (571), Expect = 4.065e-58 Identity = 119/210 (56.67%), Postives = 141/210 (67.14%), Query Frame = 3 Query: 96 GSAGNCG---SGVVCPGGECCSRFGWCGLTIDHCC-DGCQSNCNQVVCGECDPDDGTAGDGGELGKIISREMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTCHETTG--GWPDAPGGEYAWGYCFNREVGAASSDYC--DPNYPCR-GK-YYGRGPIQLTWNLHYLRCGEGLGRGEDFVDNPDLL 695 GSA CG G +CPGG CCS+FGWCG T D+C GCQS C+ G A G L +ISRE F +L +RND CPAR FYTYDAFI AA++FPAF +G++ RKREIAAF AQT HETTG GW AP G YAWGYC+NRE+ SS YC DPNYPC GK Y+GRGP+QL+WN +Y +CG + G D ++NPDLL Sbjct: 20 GSAEQCGRQAGGALCPGGLCCSQFGWCGSTADYCTVPGCQSQCS---------GSGPAPGPGGLTNLISRETFNQMLLHRNDGACPARGFYTYDAFIAAARSFPAFATTGDQATRKREIAAFLAQTSHETTGGAGWA-APDGPYAWGYCYNRELNPPSS-YCASDPNYPCAPGKQYFGRGPMQLSWNYNYGQCGRAI--GVDLLNNPDLL 216
BLAST of FC876215 vs. ExPASy Swiss-Prot
Match: CHIT_PHAVU (Endochitinase OS=Phaseolus vulgaris PE=1 SV=1) HSP 1 Score: 221.476 bits (563), Expect = 3.441e-57 Identity = 107/207 (51.69%), Postives = 134/207 (64.73%), Query Frame = 3 Query: 93 GGSAGN-CG---SGVVCPGGECCSRFGWCGLTIDHCCDGCQSNCNQVVCGECDPDDGTAGDGGELGKIISREMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTCHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCDPNYPCR--GKYYGRGPIQLTWNLHYLRCGEGLGRGEDFVDNPDLL 695 GGS G CG G +CPGG CCS+FGWCG T D+C GCQS C G + +L +ISR F+ +L++RND CPA+ FYTYDAFI AAKA+P+FGN+G+ RKREIAAF QT HETTGGW AP G YAWGYCF RE ++ P +PC +YYGRGPIQ++WN +Y +CG + G D ++ PDL+ Sbjct: 23 GGSYGEQCGRQAGGALCPGGNCCSQFGWCGSTTDYCGPGCQSQCG-----------GPSPAPTDLSALISRSTFDQMLKHRNDGACPAKGFYTYDAFIAAAKAYPSFGNTGDTATRKREIAAFLGQTSHETTGGWATAPDGPYAWGYCFVRERNPSTYCSATPQFPCAPGQQYYGRGPIQISWNYNYGQCGRAI--GVDLLNKPDLV 216
BLAST of FC876215 vs. ExPASy Swiss-Prot
Match: CHI2_PEA (Endochitinase A2 OS=Pisum sativum GN=CHI2 PE=1 SV=2) HSP 1 Score: 220.705 bits (561), Expect = 5.870e-57 Identity = 104/204 (50.98%), Postives = 134/204 (65.69%), Query Frame = 3 Query: 99 SAGNCGS---GVVCPGGECCSRFGWCGLTIDHCCDGCQSNCNQVVCGECDPDDGTAGDGGELGKIISREMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTCHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCDPNYPCRG--KYYGRGPIQLTWNLHYLRCGEGLGRGEDFVDNPDLL 695 SA CG+ G +CPGG CCS+FGWCG T ++C DGCQS C+ G++G GG L +IS + F ++L++RND C + FYTYDAF+ AAKAFP F N G+ +KREIAAF QT HETTGGWP AP G YAWGYCF RE ++ +PC +YYGRGPIQ++WN +Y +CG + G D ++NPDL+ Sbjct: 19 SAEQCGTQAGGALCPGGLCCSKFGWCGSTSEYCGDGCQSQCS-----------GSSG-GGTLSSLISGDTFNNMLKHRNDNACQGKPFYTYDAFLSAAKAFPNFANKGDTATKKREIAAFLGQTSHETTGGWPTAPDGPYAWGYCFLREQNPSTYCQASSEFPCASGKQYYGRGPIQISWNYNYGQCGRAI--GVDLLNNPDLV 208
BLAST of FC876215 vs. ExPASy Swiss-Prot
Match: CHI2_GOSHI (Endochitinase 2 (Fragment) OS=Gossypium hirsutum PE=2 SV=2) HSP 1 Score: 220.705 bits (561), Expect = 5.870e-57 Identity = 115/204 (56.37%), Postives = 137/204 (67.16%), Query Frame = 3 Query: 105 GNCGSGVVCPGGECCSRFGWCGLTIDHCC-DGCQSNCNQVVCGECDPDDGTAGDGGELGKIISREMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTCHETTG--GWPDAPGGEYAWGYCFNREVGAASSDYC--DPNYPCR-GK-YYGRGPIQLTWNLHYLRCGEGLGRGEDFVDNPDLL 695 G G +CPGG CCS+FGWCG T D+C GCQS C+ G A G L +ISRE F +L +RND CPAR FYTYDAFI AA++FPAF +G++ RKREIAAF AQT HETTG GW AP G YAWGYC+NRE+ SS YC DPNYPC GK Y+GRGP+QL+WN +Y +CG + G D ++NPDLL Sbjct: 4 GRQAGGALCPGGLCCSQFGWCGSTADYCTVPGCQSQCS---------GSGPAPGPGGLTNLISRETFNQMLLHRNDGACPARGFYTYDAFIAAARSFPAFATTGDQATRKREIAAFLAQTSHETTGGAGWA-APDGPYAWGYCYNRELNPPSS-YCASDPNYPCAPGKQYFGRGPMQLSWNYNYGQCGRAI--GVDLLNNPDLL 194
BLAST of FC876215 vs. ExPASy Swiss-Prot
Match: CHIB_ARATH (Basic endochitinase B OS=Arabidopsis thaliana GN=CHI-B PE=1 SV=3) HSP 1 Score: 219.164 bits (557), Expect = 1.708e-56 Identity = 108/207 (52.17%), Postives = 135/207 (65.22%), Query Frame = 3 Query: 99 SAGNCG---SGVVCPGGECCSRFGWCGLTIDHCCD-GCQSNCNQVVCGECDPDDGTAGDGGELGKIISREMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTCHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCDPN--YPCRG--KYYGRGPIQLTWNLHYLRCGEGLGRGEDFVDNPDLL 695 SA CG G +CP G CCS FGWCG T +C GCQS +C P G G+L IIS F+D+L++RND CPAR FYTY+AFI AAK+FP FG +G+ RK+E+AAFF QT HETTGGW AP G Y+WGYCF +E A SDYC+P+ +PC +YYGRGP+QL+WN +Y CG + G D ++NPDL+ Sbjct: 32 SAEQCGRQAGGALCPNGLCCSEFGWCGNTEPYCKQPGCQS--------QCTPGGTPPGPTGDLSGIISSSQFDDMLKHRNDAACPARGFYTYNAFITAAKSFPGFGTTGDTATRKKEVAAFFGQTSHETTGGWATAPDGPYSWGYCFKQEQNPA-SDYCEPSATWPCASGKRYYGRGPMQLSWNYNYGLCGRAI--GVDLLNNPDLV 227
BLAST of FC876215 vs. ExPASy Swiss-Prot
Match: CHI5_PHAVU (Endochitinase CH5B OS=Phaseolus vulgaris PE=3 SV=1) HSP 1 Score: 218.394 bits (555), Expect = 2.913e-56 Identity = 106/207 (51.21%), Postives = 133/207 (64.25%), Query Frame = 3 Query: 93 GGSAGN-CG---SGVVCPGGECCSRFGWCGLTIDHCCDGCQSNCNQVVCGECDPDDGTAGDGGELGKIISREMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTCHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCDPNYPCR--GKYYGRGPIQLTWNLHYLRCGEGLGRGEDFVDNPDLL 695 GGS G CG G +CPGG CCS+FGWCG T D+C CQS C G + +L +ISR F+ +L++RND CPA+ FYTYDAFI AAKA+P+FGN+G+ RKREIAAF QT HETTGGW AP G YAWGYCF RE ++ P +PC +YYGRGPIQ++WN +Y +CG + G D ++ PDL+ Sbjct: 22 GGSYGEQCGRQAGGALCPGGNCCSQFGWCGSTTDYCGKDCQSQCG-----------GPSPAPTDLSALISRSTFDQVLKHRNDGACPAKGFYTYDAFIAAAKAYPSFGNTGDTATRKREIAAFLGQTSHETTGGWATAPDGPYAWGYCFVRERNPSAYCSATPQFPCAPGQQYYGRGPIQISWNYNYGQCGRAI--GVDLLNKPDLV 215
BLAST of FC876215 vs. ExPASy Swiss-Prot
Match: CHI2_BRANA (Endochitinase CH25 OS=Brassica napus PE=2 SV=1) HSP 1 Score: 218.394 bits (555), Expect = 2.913e-56 Identity = 108/202 (53.47%), Postives = 132/202 (65.35%), Query Frame = 3 Query: 105 GNCGSGVVCPGGECCSRFGWCGLTIDHCCD-GCQSNCNQVVCGECDPDDGTAGDGGELGKIISREMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTCHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCDPN--YPCRG--KYYGRGPIQLTWNLHYLRCGEGLGRGEDFVDNPDLL 695 G G +CP G CCS FGWCG T +C GCQS C G P G G+L IISR F+D+L++RND CPAR FYTYDAFI AAK+FP FG +G+ RK+EIAAFF QT HETTGGW AP G Y+WGYCF +E SS+YC P+ +PC YYGRGP+QL+WN +Y +CG + G D ++NPDL+ Sbjct: 24 GRQAGGALCPNGLCCSEFGWCGDTEAYCKQPGCQSQC-----GGTPP-----GPTGDLSGIISRSQFDDMLKHRNDNACPARGFYTYDAFINAAKSFPGFGTTGDTATRKKEIAAFFGQTSHETTGGWATAPDGPYSWGYCFKQEQN-PSSNYCSPSAEWPCASGKSYYGRGPMQLSWNYNYGQCGRAI--GSDLLNNPDLV 212 The following BLAST results are available for this feature:
BLAST of FC876215 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 56
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876215 ID=FC876215; Name=FC876215; organism=Citrus clementina; type=EST; length=696bpback to top |