FC876295
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC876295 vs. ExPASy Swiss-Prot
Match: CARA_STRA5 (Carbamoyl-phosphate synthase small chain OS=Streptococcus agalactiae serotype V GN=carA PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 1.046e-12 Identity = 45/118 (38.14%), Postives = 65/118 (55.08%), Query Frame = 1 Query: 1 SYAGQFVLMTNPHIGNTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGISDVDTRAITRRLRQDGSLIGVLSTEESKSDQELLEMSRSWDIVGIDLISDVSGK 354 SY GQ + T P IGN G+N DD ES + G+VI + SNWR TL +L + I GIS +DTRA+T+ +R+ G++ L E + + L + +S ++ D I VS K Sbjct: 45 SYNGQIITFTYPLIGNYGINRDDYESIRPTCKGVVIYEWAEYPSNWRQQMTLDEFLKLKGIPGISGIDTRALTKIIRKHGTMKACLINEGNSIHEALENLQKS--VLLNDQIEQVSTK 160
BLAST of FC876295 vs. ExPASy Swiss-Prot
Match: CARA_STRA3 (Carbamoyl-phosphate synthase small chain OS=Streptococcus agalactiae serotype III GN=carA PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 1.046e-12 Identity = 45/118 (38.14%), Postives = 65/118 (55.08%), Query Frame = 1 Query: 1 SYAGQFVLMTNPHIGNTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGISDVDTRAITRRLRQDGSLIGVLSTEESKSDQELLEMSRSWDIVGIDLISDVSGK 354 SY GQ + T P IGN G+N DD ES + G+VI + SNWR TL +L + I GIS +DTRA+T+ +R+ G++ L E + + L + +S ++ D I VS K Sbjct: 45 SYNGQIITFTYPLIGNYGINRDDYESIRPTCKGVVIYEWAEYPSNWRQQMTLDEFLKLKGIPGISGIDTRALTKIIRKHGTMKACLINEGNSIHEALENLQKS--VLLNDQIEQVSTK 160
BLAST of FC876295 vs. ExPASy Swiss-Prot
Match: CARA_STAAW (Carbamoyl-phosphate synthase small chain OS=Staphylococcus aureus (strain MW2) GN=carA PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 1.046e-12 Identity = 41/95 (43.16%), Postives = 55/95 (57.89%), Query Frame = 1 Query: 1 SYAGQFVLMTNPHIGNTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGISDVDTRAITRRLRQDGSLIGVLSTEESKSDQ 285 SY GQ + T P IGN G+N DD ES L G+V++ S SN+R +TL + L I GI+ VDTR+ITR++RQ G L + + DQ Sbjct: 47 SYTGQIITFTYPLIGNYGINRDDFESLVPTLNGIVVKEASAHPSNFRQQKTLHDVLELHQIPGIAGVDTRSITRKIRQHGVLKAGFTDRKEDIDQ 141
BLAST of FC876295 vs. ExPASy Swiss-Prot
Match: CARA_STAAS (Carbamoyl-phosphate synthase small chain OS=Staphylococcus aureus (strain MSSA476) GN=carA PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 1.046e-12 Identity = 41/95 (43.16%), Postives = 55/95 (57.89%), Query Frame = 1 Query: 1 SYAGQFVLMTNPHIGNTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGISDVDTRAITRRLRQDGSLIGVLSTEESKSDQ 285 SY GQ + T P IGN G+N DD ES L G+V++ S SN+R +TL + L I GI+ VDTR+ITR++RQ G L + + DQ Sbjct: 47 SYTGQIITFTYPLIGNYGINRDDFESLVPTLNGIVVKEASAHPSNFRQQKTLHDVLELHQIPGIAGVDTRSITRKIRQHGVLKAGFTDRKEDIDQ 141
BLAST of FC876295 vs. ExPASy Swiss-Prot
Match: CARA_STAAR (Carbamoyl-phosphate synthase small chain OS=Staphylococcus aureus (strain MRSA252) GN=carA PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 1.046e-12 Identity = 41/95 (43.16%), Postives = 55/95 (57.89%), Query Frame = 1 Query: 1 SYAGQFVLMTNPHIGNTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGISDVDTRAITRRLRQDGSLIGVLSTEESKSDQ 285 SY GQ + T P IGN G+N DD ES L G+V++ S SN+R +TL + L I GI+ VDTR+ITR++RQ G L + + DQ Sbjct: 47 SYTGQIITFTYPLIGNYGINRDDFESLVPTLNGIVVKEASAHPSNFRQQKTLHDVLELHQIPGIAGVDTRSITRKIRQHGVLKAGFTDRKEDIDQ 141
BLAST of FC876295 vs. ExPASy Swiss-Prot
Match: CARA_STAAN (Carbamoyl-phosphate synthase small chain OS=Staphylococcus aureus (strain N315) GN=carA PE=1 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 1.046e-12 Identity = 41/95 (43.16%), Postives = 55/95 (57.89%), Query Frame = 1 Query: 1 SYAGQFVLMTNPHIGNTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGISDVDTRAITRRLRQDGSLIGVLSTEESKSDQ 285 SY GQ + T P IGN G+N DD ES L G+V++ S SN+R +TL + L I GI+ VDTR+ITR++RQ G L + + DQ Sbjct: 47 SYTGQIITFTYPLIGNYGINRDDFESLVPTLNGIVVKEASAHPSNFRQQKTLHDVLELHQIPGIAGVDTRSITRKIRQHGVLKAGFTDRKEDIDQ 141
BLAST of FC876295 vs. ExPASy Swiss-Prot
Match: CARA_STAAM (Carbamoyl-phosphate synthase small chain OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=carA PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 1.046e-12 Identity = 41/95 (43.16%), Postives = 55/95 (57.89%), Query Frame = 1 Query: 1 SYAGQFVLMTNPHIGNTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGISDVDTRAITRRLRQDGSLIGVLSTEESKSDQ 285 SY GQ + T P IGN G+N DD ES L G+V++ S SN+R +TL + L I GI+ VDTR+ITR++RQ G L + + DQ Sbjct: 47 SYTGQIITFTYPLIGNYGINRDDFESLVPTLNGIVVKEASAHPSNFRQQKTLHDVLELHQIPGIAGVDTRSITRKIRQHGVLKAGFTDRKEDIDQ 141
BLAST of FC876295 vs. ExPASy Swiss-Prot
Match: CARA_STAAC (Carbamoyl-phosphate synthase small chain OS=Staphylococcus aureus (strain COL) GN=carA PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 1.046e-12 Identity = 41/95 (43.16%), Postives = 55/95 (57.89%), Query Frame = 1 Query: 1 SYAGQFVLMTNPHIGNTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGISDVDTRAITRRLRQDGSLIGVLSTEESKSDQ 285 SY GQ + T P IGN G+N DD ES L G+V++ S SN+R +TL + L I GI+ VDTR+ITR++RQ G L + + DQ Sbjct: 47 SYTGQIITFTYPLIGNYGINRDDFESLVPTLNGIVVKEASAHPSNFRQQKTLHDVLELHQIPGIAGVDTRSITRKIRQHGVLKAGFTDRKEDIDQ 141
BLAST of FC876295 vs. ExPASy Swiss-Prot
Match: CARA_STRMU (Carbamoyl-phosphate synthase small chain OS=Streptococcus mutans GN=carA PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 1.784e-12 Identity = 36/89 (40.45%), Postives = 53/89 (59.55%), Query Frame = 1 Query: 1 SYAGQFVLMTNPHIGNTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGISDVDTRAITRRLRQDGSLIGVLSTE 267 SY GQ + T P +GN G+N DD ES + G+V+ + +NWR TL +L +NI GIS +DTRA+T+ +R G++ L+ E Sbjct: 46 SYNGQILTFTYPLVGNYGINRDDYESIKPTCKGVVVSENARRANNWRKQMTLDEFLKSKNIPGISGIDTRALTKIIRHHGTMKATLANE 134
BLAST of FC876295 vs. ExPASy Swiss-Prot
Match: CARA_DESDA (Carbamoyl-phosphate synthase small chain OS=Desulfovibrio desulfuricans (strain ATCC 27774 / DSM 6949) GN=carA PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 3.042e-12 Identity = 43/121 (35.54%), Postives = 67/121 (55.37%), Query Frame = 1 Query: 1 SYAGQFVLMTNPHIGNTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGISDVDTRAITRRLRQDGSLIGVLSTEESKSDQELLEMSRSWDIV-GIDLISDVSGKEP 360 SY GQ V MT P IGN G +D ES A L+++ SNWR +L ++ G+ +DTRA+TR LR +G++ G++ST E+ L E +R+ + G +L+ V+ ++P Sbjct: 45 SYYGQMVCMTYPLIGNYGTCREDMESAGVHCAALLVKECCKKPSNWRSTMSLPEFMKRYEKPGVEGLDTRALTRHLRMNGAMRGIISTRET-DPAVLQERARALPAMKGHNLVPFVAPEKP 164 The following BLAST results are available for this feature:
BLAST of FC876295 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 140
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876295 ID=FC876295; Name=FC876295; organism=Citrus clementina; type=EST; length=361bpback to top |