FC876295
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC876295 vs. ExPASy Swiss-Prot
Match: CARA_BACSU (Carbamoyl-phosphate synthase pyrimidine-specific small chain OS=Bacillus subtilis GN=pyrAA PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 4.536e-16 Identity = 43/103 (41.75%), Postives = 61/103 (59.22%), Query Frame = 1 Query: 1 SYAGQFVLMTNPHIGNTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGISDVDTRAITRRLRQDGSLIGVLSTEESKSDQELLEMSRS 309 SY GQ V +T P IGN G+N DD ES F+ GL+I+ L SNWR A TL YL +NI G+ +DTR +TR +R G+L G ++ + + L ++ + Sbjct: 45 SYCGQIVTLTYPLIGNYGINRDDFESITPFVKGLIIKELCELPSNWRSAYTLDEYLKMKNIPGLQGIDTRKLTRMIRTAGALKGTFASSDEDIEAVLKRLNET 147
BLAST of FC876295 vs. ExPASy Swiss-Prot
Match: CARA_CORGL (Carbamoyl-phosphate synthase small chain OS=Corynebacterium glutamicum GN=carA PE=3 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 5.924e-16 Identity = 51/124 (41.13%), Postives = 76/124 (61.29%), Query Frame = 1 Query: 1 SYAGQFVLMTNPHIGNTGVNFDDEESR--QCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGISDVDTRAITRRLRQDGSL-IGVLS-TEESKSDQELLEMSRSWD-IVGIDLISDVSGKE 357 SY Q V+ T P IGNTG N +D ESR + ++AGLVIR L+ SNWR +L +A + I+GI +DTRA+ R LR +GS+ G+ S + + +EL+E+ ++ + G +L +VS E Sbjct: 61 SYHRQIVVATAPQIGNTGWNDEDNESRDGKIWVAGLVIRDLAARVSNWRATTSLQQEMAGQGIVGIGGIDTRALVRHLRNEGSIAAGIFSGADAQRPVEELVEIVKNQPAMTGANLSVEVSADE 184
BLAST of FC876295 vs. ExPASy Swiss-Prot
Match: CARA_LISMO (Carbamoyl-phosphate synthase small chain OS=Listeria monocytogenes GN=carA PE=3 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 7.737e-16 Identity = 47/116 (40.52%), Postives = 71/116 (61.21%), Query Frame = 1 Query: 1 SYAGQFVLMTNPHIGNTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGISDVDTRAITRRLRQDGSLIGVLSTEESKSDQELLEMSRSWDIVGIDLISDVS 348 SY GQ + T P +GN GVN DD ES + G+V+R + SNWR TL +L E+ I GI+ +DTR +T+ +R++G+L G+L+ E+ +ELL RS + +D + +VS Sbjct: 46 SYYGQIITFTYPLVGNYGVNRDDFESINPAVKGVVVREAAEFASNWRNQITLNEFLKEKGIPGIAGIDTRKLTKLIRKEGTLKGILAA-ETADKEELLHHLRSVRL-PVDQVHEVS 159
BLAST of FC876295 vs. ExPASy Swiss-Prot
Match: CARA_BIFLO (Carbamoyl-phosphate synthase small chain OS=Bifidobacterium longum GN=carA PE=3 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 7.737e-16 Identity = 50/129 (38.76%), Postives = 75/129 (58.14%), Query Frame = 1 Query: 1 SYAGQFVLMTNPHIGNTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGISDVDTRAITRRLRQDGSL-IGVLS--------TEESKSDQELLE-MSRSWDIVGIDLISDVSGKE 357 SY Q V+ T PHIG+TGVN +D ES + ++AG ++R S SNWR +L + LA+ I+G+S +DTR + R LR G + G+ S T K+ ++LLE + + + G+ L +VS KE Sbjct: 61 SYDRQIVVQTFPHIGDTGVNSEDPESSRIWVAGYIVRDPSPNVSNWRAEGSLDDDLAKNGIVGLSHIDTRKLVRHLRSAGVMRAGIFSGDALTDQATGALKTIEQLLEDVKNTPQMQGLSLYDEVSTKE 189
BLAST of FC876295 vs. ExPASy Swiss-Prot
Match: CARA_SILPO (Carbamoyl-phosphate synthase small chain OS=Silicibacter pomeroyi GN=carA PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 1.010e-15 Identity = 49/119 (41.18%), Postives = 68/119 (57.14%), Query Frame = 1 Query: 1 SYAGQFVLMTNPHIGNTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGISDVDTRAITRRLRQDGS-LIGVLSTEESKSD-QELLEMSRSW-DIVGIDLISDVS 348 SYAGQ V T PHIGN GV +D+E+ AG+V++ SNWR AE L +LA R + I VDTR +TR +RQ G+ + + E K D L+ +R + + G+DL DV+ Sbjct: 53 SYAGQIVTFTFPHIGNVGVTPEDDETTDPVAAGMVVKWDPTAASNWRAAEELKGWLARRGRIAIGGVDTRRLTRAIRQQGAPHVALAHDPEGKFDLAALIAAARGFAGLEGMDLAKDVT 171
BLAST of FC876295 vs. ExPASy Swiss-Prot
Match: CARA_LISMF (Carbamoyl-phosphate synthase small chain OS=Listeria monocytogenes serotype 4b (strain F2365) GN=carA PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 1.010e-15 Identity = 47/116 (40.52%), Postives = 72/116 (62.07%), Query Frame = 1 Query: 1 SYAGQFVLMTNPHIGNTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGISDVDTRAITRRLRQDGSLIGVLSTEESKSDQELLEMSRSWDIVGIDLISDVS 348 SY GQ + T P +GN GVN DD ES + G+V+R + SNWR TL +L E+ I GI+ +DTR +T+ +R++G+L G+L+ E+ + +ELL RS + +D + +VS Sbjct: 46 SYYGQIITFTYPLVGNYGVNRDDFESINPAVKGVVVREAAEFPSNWRNQITLDEFLKEKGIPGIAGIDTRKLTKLIRKEGTLKGILAA-ETANKEELLHHLRSVRL-PVDQVHEVS 159
BLAST of FC876295 vs. ExPASy Swiss-Prot
Match: CARA_AKKM8 (Carbamoyl-phosphate synthase small chain OS=Akkermansia muciniphila (strain ATCC BAA-835) GN=carA PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 1.010e-15 Identity = 44/103 (42.72%), Postives = 66/103 (64.08%), Query Frame = 1 Query: 1 SYAGQFVLMTNPHIGNTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGISDVDTRAITRRLRQDGSLIGVLSTEESKSDQELLEMSRS 309 SY+GQ V MT P IGN GVN +D ES + ++G V+ L+ SNWR E+LG +L ++ ++GI VDTR I + LR G++ L+TE + +E +E +R+ Sbjct: 45 SYSGQIVTMTYPLIGNYGVNPEDGESGKAQVSGFVVAELAKVHSNWRATESLGPWLEKQGVIGIEGVDTRKIAKHLRSAGAMRACLTTE--LTPEEAVEAARN 145
BLAST of FC876295 vs. ExPASy Swiss-Prot
Match: CARA_MYCTU (Carbamoyl-phosphate synthase small chain OS=Mycobacterium tuberculosis GN=carA PE=3 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 1.724e-15 Identity = 51/124 (41.13%), Postives = 70/124 (56.45%), Query Frame = 1 Query: 1 SYAGQFVLMTNPHIGNTGVNFDDEESR--QCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGISDVDTRAITRRLRQDGSL-IGVLSTEESKSDQELLEMSRS-WDIVGIDLISDVSGKEP 360 SY Q V+ T P IGNTG N +D ESR + ++AG +R S SNWR TL + L + I+GI+ +DTRA+ R LR GS+ GV S +L+ R+ ++G DL +VS EP Sbjct: 46 SYHRQIVVATAPQIGNTGWNGEDSESRGERIWVAGYAVRDPSPRASNWRATGTLEDELIRQRIVGIAGIDTRAVVRHLRSRGSMKAGVFSDGALAEPADLIARVRAQQSMLGADLAGEVSTAEP 169
BLAST of FC876295 vs. ExPASy Swiss-Prot
Match: CARA_BIFLI (Carbamoyl-phosphate synthase small chain OS=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / NCTC 11817 / S12) GN=carA PE=3 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 1.724e-15 Identity = 50/129 (38.76%), Postives = 74/129 (57.36%), Query Frame = 1 Query: 1 SYAGQFVLMTNPHIGNTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGISDVDTRAITRRLRQDGSL-IGVLS--------TEESKSDQELLEMSRSW-DIVGIDLISDVSGKE 357 SY Q V+ T PHIG+TGVN +D ES + ++AG ++R S SNWR +L + L + I+G+S +DTR + R LR G + G+ S T K+ ++LLE R+ + G+ L +VS KE Sbjct: 61 SYDRQIVVQTFPHIGDTGVNSEDPESSRIWVAGYIVRDPSPNVSNWRAEGSLDDDLTKNGIVGLSHIDTRKLVRHLRSAGVMRAGIFSGDALTDQATGALKTIEQLLEDVRNTPQMQGLSLYDEVSTKE 189
BLAST of FC876295 vs. ExPASy Swiss-Prot
Match: CARA_LISIN (Carbamoyl-phosphate synthase small chain OS=Listeria innocua GN=carA PE=3 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 2.251e-15 Identity = 47/116 (40.52%), Postives = 70/116 (60.34%), Query Frame = 1 Query: 1 SYAGQFVLMTNPHIGNTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGISDVDTRAITRRLRQDGSLIGVLSTEESKSDQELLEMSRSWDIVGIDLISDVS 348 SY GQ + T P +GN GVN DD ES + G+V+R + SNWR TL +L E+ I GI+ +DTR +T+ +R++G+L G+LS + +ELL RS + +D + +VS Sbjct: 46 SYYGQIITFTYPLVGNYGVNRDDFESINPAVKGVVVREAAEYPSNWRNQITLNEFLKEKGIPGIAGIDTRKLTKLIRKEGTLKGILSA-ATADKEELLHHLRSVRL-PVDQVHEVS 159 The following BLAST results are available for this feature:
BLAST of FC876295 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 140
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876295 ID=FC876295; Name=FC876295; organism=Citrus clementina; type=EST; length=361bpback to top |