FC876357
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC876357 vs. ExPASy Swiss-Prot
Match: RPE_SERMA (Ribulose-phosphate 3-epimerase OS=Serratia marcescens GN=rpe PE=3 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 1.536e-26 Identity = 67/159 (42.14%), Postives = 99/159 (62.26%), Query Frame = 2 Query: 155 IAPSMLSSDFANLASEAERILNCGADWLHMDIMDGHFVPNLTIGAPVIESLRKH-TKAYLDCHLMVTNPLDYVEP-LGKAGASGFTFHVEISKDNWQELVQRIKSKGMRPGVALKPGTSVEEVYPLVEGANPVEMVLVMTVEPGFGGQKFMPEMMDKVR 625 IAPS+LS+DFA L + +L G D +H D+MD H+VPNLTIG V E+LR + A +D HLMV P+D + P KAGAS +FH E S ++ +Q IK G + G+ P T + + +++ ++++L+M+V PGFGGQ F+ +DK+R Sbjct: 6 IAPSILSADFARLGEDTANVLAAGGDVVHFDVMDNHYVPNLTIGPMVCEALRNYGITAPIDVHLMV-KPVDRIVPDFAKAGASYISFHPEAS-EHVDRTIQLIKEHGCKAGLVFNPATPLSYLDYVMD---KIDVILLMSVNPGFGGQSFIHGTLDKLR 159
BLAST of FC876357 vs. ExPASy Swiss-Prot
Match: RPE_BUCAP (Ribulose-phosphate 3-epimerase OS=Buchnera aphidicola subsp. Schizaphis graminum GN=rpe PE=3 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 2.006e-26 Identity = 63/159 (39.62%), Postives = 102/159 (64.15%), Query Frame = 2 Query: 155 IAPSMLSSDFANLASEAERILNCGADWLHMDIMDGHFVPNLTIGAPVIESLRKHT-KAYLDCHLMVTNPLDYVEP-LGKAGASGFTFHVEISKDNWQELVQRIKSKGMRPGVALKPGTSVEEVYPLVEGANPVEMVLVMTVEPGFGGQKFMPEMMDKVR 625 +A S+LS+DFA L + ++ ++ G+DW+H D+MD H+VPNLT+G ++++LR + +D HLMV P+D + P +AGA TFH E S D+ + IK G + G+AL P TS+ + ++E ++++L+M+V PGFG Q F+P +K+R Sbjct: 6 LASSILSADFARLGEDTKKAIDAGSDWIHFDVMDNHYVPNLTMGPMILKALRNYNITVPIDVHLMV-KPVDNLIPQFAEAGADFITFHPE-STDHIDRTLNLIKECGCKAGLALNPATSLNFLDYVME---KLDLILLMSVNPGFGNQSFLPTSFNKLR 159
BLAST of FC876357 vs. ExPASy Swiss-Prot
Match: RPE_BUCAI (Ribulose-phosphate 3-epimerase OS=Buchnera aphidicola subsp. Acyrthosiphon pisum GN=rpe PE=3 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 4.469e-26 Identity = 62/159 (38.99%), Postives = 103/159 (64.78%), Query Frame = 2 Query: 155 IAPSMLSSDFANLASEAERILNCGADWLHMDIMDGHFVPNLTIGAPVIESLRKHT-KAYLDCHLMVTNPLDYVEP-LGKAGASGFTFHVEISKDNWQELVQRIKSKGMRPGVALKPGTSVEEVYPLVEGANPVEMVLVMTVEPGFGGQKFMPEMMDKVR 625 +APS+LS+DFA L + +++++ G+D +H D+MD H+VPNL++G ++ESLR + A +D HLMV P+D + P KAGA+ TFH E + + + + IK G + G+A P T + + ++E ++++L+M+V PGFG Q F+P +K+R Sbjct: 6 LAPSILSADFARLGEDIKKVIDAGSDLIHFDVMDNHYVPNLSMGPMILESLRNYNITAPIDVHLMV-KPVDNLIPQFAKAGATFITFHPEATL-HIERTLNLIKENGCKAGLAFNPATPLNFLDYILE---KLDLILLMSVNPGFGNQSFLPSTFNKLR 159
BLAST of FC876357 vs. ExPASy Swiss-Prot
Match: RPEC_RALEH (Ribulose-phosphate 3-epimerase, chromosomal OS=Ralstonia eutropha (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=cbbEC PE=3 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 4.469e-26 Identity = 69/159 (43.40%), Postives = 99/159 (62.26%), Query Frame = 2 Query: 152 KIAPSMLSSDFANLASEAERILNCGADWLHMDIMDGHFVPNLTIGAPVIESLRKHTKAYLDCHLMVTNPLDYVEPL-GKAGASGFTFHVEISKDNWQELVQRIKSKGMRPGVALKPGTSVEEVYPLVEGANPVEMVLVMTVEPGFGGQKFMPEMMDKVR 625 ++APS+LS+DFA L E I GAD +H D+MD H+VPNLTIG V E++R +D HLMV P+D + PL KAGA+ +FH E S+ + + I+ G + G+ L P T + L + +++VL+M+V PGFGGQ F+P ++DKVR Sbjct: 17 RLAPSILSADFARLGEEVCAIEAGGADLVHFDVMDNHYVPNLTIGPLVCEAIRPLVSIPIDVHLMV-EPVDALIPLFAKAGANIISFHPEASR-HVDRTIGLIRDHGCKAGLVLNPATPLGW---LDHTLDQLDLVLLMSVNPGFGGQAFIPGVLDKVR 170
BLAST of FC876357 vs. ExPASy Swiss-Prot
Match: RPE_METJA (Ribulose-phosphate 3-epimerase OS=Methanocaldococcus jannaschii GN=rpe PE=3 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 5.837e-26 Identity = 66/160 (41.25%), Postives = 99/160 (61.88%), Query Frame = 2 Query: 152 KIAPSMLSSDFANLASEAERILNCGADWLHMDIMDGHFVPNLTIGAPVIESLRKHTKAYLDCHLMVTNPLDYVEPLGKAGASGFTFHVEISKDNWQELVQRIKSKGMRPGVALKPGTSVEEVYPLVEGANPVEMVLVMTVEPGFGGQKFMPEMMDKVRTL 631 KI S+LS+DF +L E ++ G D+ H+D+MDGHFVPN+++G + + ++K T+ ++ HLMV N +V + TFH+E K ++ ++ RIKS G +P VAL P T ++ + ++ V VLVMTVEPGF GQKF+P M K+R L Sbjct: 3 KIGASILSADFGHLREEIKKAEEAGVDFFHVDMMDGHFVPNISMGIGIAKHVKKLTELPVEVHLMVENVDLFVNEFEE--MDYITFHIEAVKFPFR-IINRIKSIGAKPIVALNPATPLDAIEYIL---GDVYAVLVMTVEPGFSGQKFIPVMTKKIRKL 156
BLAST of FC876357 vs. ExPASy Swiss-Prot
Match: RPE_AQUAE (Ribulose-phosphate 3-epimerase OS=Aquifex aeolicus GN=rpe PE=3 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 9.956e-26 Identity = 59/159 (37.11%), Postives = 94/159 (59.12%), Query Frame = 2 Query: 155 IAPSMLSSDFANLASEAERILNCGADWLHMDIMDGHFVPNLTIGAPVIESLRKHTKAYLDCHLMVTNPLDYVEPLGKAGASGFTFHVEISKDNWQELVQRIKSKGMRPGVALKPGTSVEEVYPLVEGANPVEMVLVMTVEPGFGGQKFMPEMMDKVRTL 631 +APS+L+ D+ + + + + GAD LH D+MDGHFVPN+T G ++ +RK +D HLM+ NP Y+ +AGA+ + H+E + + +Q IK G + GV + PGTS+ + E + VL+M+V PGF GQKF+ ++++R L Sbjct: 4 LAPSILAGDWWCIGEQIQATIRGGADILHYDVMDGHFVPNITAGYEILSHIRKRASLPIDAHLMIENPDKYIPKFVEAGANWISVHIE-NNYHIHRTLQLIKELGAKAGVVVNPGTSLSAI---EEALYYADYVLLMSVNPGFSGQKFIERSIERLRIL 158
BLAST of FC876357 vs. ExPASy Swiss-Prot
Match: RPE_HAEIN (Ribulose-phosphate 3-epimerase OS=Haemophilus influenzae GN=rpe PE=3 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 1.698e-25 Identity = 65/159 (40.88%), Postives = 99/159 (62.26%), Query Frame = 2 Query: 155 IAPSMLSSDFANLASEAERILNCGADWLHMDIMDGHFVPNLTIGAPVIESLRKH-TKAYLDCHLMVTNPLDYVEP-LGKAGASGFTFHVEISKDNWQELVQRIKSKGMRPGVALKPGTSVEEVYPLVEGANPVEMVLVMTVEPGFGGQKFMPEMMDKVR 625 IAPS+LS+D A L + + +LN GAD +H D+MD H+VPNLT G V ++LR + A +D HLMV P+D + P KAGA+ TFH E S ++ +Q I+ G + G+ P + + +++ V++VL+M+V PGFGGQ F+P + K++ Sbjct: 6 IAPSILSADLARLGDDVQNVLNAGADVIHFDVMDNHYVPNLTFGPAVCQALRDYGITAPIDVHLMV-KPVDRIIPDFAKAGANYITFHPE-SSEHIDRSLQLIRDCGCKSGLVFNPAMPLSYLDYVLD---KVDVVLLMSVNPGFGGQSFIPATLKKLQ 159
BLAST of FC876357 vs. ExPASy Swiss-Prot
Match: RPEP_RALEH (Ribulose-phosphate 3-epimerase, plasmid OS=Ralstonia eutropha (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=cbbEP PE=3 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 3.783e-25 Identity = 67/159 (42.14%), Postives = 98/159 (61.64%), Query Frame = 2 Query: 152 KIAPSMLSSDFANLASEAERILNCGADWLHMDIMDGHFVPNLTIGAPVIESLRKHTKAYLDCHLMVTNPLDYVEPL-GKAGASGFTFHVEISKDNWQELVQRIKSKGMRPGVALKPGTSVEEVYPLVEGANPVEMVLVMTVEPGFGGQKFMPEMMDKVR 625 ++APS+LS+DFA L E I GAD +H D+MD H+V NLTIG V E++R +D HLMV P+D + P+ KAGA+ +FH E S+ + + I+ G + G+ L P T + L + +++VL+M+V PGFGGQ F+P ++DKVR Sbjct: 17 RLAPSILSADFARLGEEVCAIEAGGADLVHFDVMDNHYVSNLTIGPLVCEAIRPLVSIPIDVHLMV-EPVDALIPMFAKAGANLISFHPEASR-HVDRTIGLIRDHGCKAGLVLNPATPLSW---LDHTLDKLDLVLLMSVNPGFGGQAFIPGVLDKVR 170
BLAST of FC876357 vs. ExPASy Swiss-Prot
Match: RPE_BUCBP (Ribulose-phosphate 3-epimerase OS=Buchnera aphidicola subsp. Baizongia pistaciae GN=rpe PE=3 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 1.943e-21 Identity = 58/160 (36.25%), Postives = 95/160 (59.38%), Query Frame = 2 Query: 155 IAPSMLSSDFANLASEAERILNCGADWLHMDIMDGHFVPNLTIGAPVIESLR---KHTKAYLDCHLMVTNPLDYVEPLGKAGASGFTFHVEISKDNWQELVQRIKSKGMRPGVALKPGTSVEEVYPLVEGANPVEMVLVMTVEPGFGGQKFMPEMMDKVR 625 ++ S+LS++F+ L + +L G+D +H D+MD H+V NLT G V+ESLR K +D HLM D + K + +FH E S +N ++ ++ IKS G + G+AL P T + L + ++++L+M+V PGF GQKF+P +++K+R Sbjct: 6 LSSSVLSANFSRLGEDIFDVLKSGSDMIHYDVMDNHYVKNLTFGPIVLESLRSVEKIKSMVIDVHLMTCPVDDLIIKFAKLDVNIISFHPE-STNNVEKTIKLIKSYGCKVGLALNPLT---PLCVLDNVLDKIDLILLMSVNPGFPGQKFIPSILNKIR 161
BLAST of FC876357 vs. ExPASy Swiss-Prot
Match: RPE_ENCCU (Ribulose-phosphate 3-epimerase OS=Encephalitozoon cuniculi GN=RPE1 PE=3 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 2.903e-17 Identity = 53/165 (32.12%), Postives = 87/165 (52.73%), Query Frame = 2 Query: 128 KKKMGVTAKIAPSMLSSDFANLASEAERILNCGADWLHMDIMDGHFVPNLTIGAPVIESLRKHTKAYLDCHLMVTNPLDYVEPLGKAGASGFTFHVEISKDNWQELVQRIKSKGMRPGVALKPGTSVEEVYPLVEGANPVEMVLVMTVEPGFGGQKFMPEMMDKV 622 KK++G+ S+L +F NL E + G +H+D+MD FV N+T G +I + +H + D H+MV +PLD + + S T H E+ + + + ++ + + G+AL P T V++ + VL+M+V+PGFGGQKF E + KV Sbjct: 7 KKRIGI------SILDCNFGNLEEELGELKRNGVTNIHLDVMDTTFVKNITFGPCIINRILEHDFVF-DVHMMVESPLDIIMQIDLERVSLVTIHSEVC--DKAGVAEYLRKRNVLFGIALNPETQVDDA-----EMRSADFVLIMSVKPGFGGQKFQEECLAKV 157 The following BLAST results are available for this feature:
BLAST of FC876357 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 41
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876357 ID=FC876357; Name=FC876357; organism=Citrus clementina; type=EST; length=633bpback to top |