FC876357
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC876357 vs. ExPASy Swiss-Prot
Match: RPE1_ORYSJ (Ribulose-phosphate 3-epimerase, cytoplasmic isoform OS=Oryza sativa subsp. japonica GN=Os09g0505700 PE=1 SV=1) HSP 1 Score: 292.352 bits (747), Expect = 1.324e-78 Identity = 137/161 (85.09%), Postives = 152/161 (94.41%), Query Frame = 2 Query: 149 AKIAPSMLSSDFANLASEAERILNCGADWLHMDIMDGHFVPNLTIGAPVIESLRKHTKAYLDCHLMVTNPLDYVEPLGKAGASGFTFHVEISKDNWQELVQRIKSKGMRPGVALKPGTSVEEVYPLVEGANPVEMVLVMTVEPGFGGQKFMPEMMDKVRTL 631 AKIAPSMLSSDFANLA+EA+R++ GADWLHMDIMDGHFVPNLTIGAPVI+SLRKHTKAYLDCHLMVTNP DYVEPL KAGASGFTFH+E+S+DNWQEL+Q IK+KGMRPGV+L+PGT VEEV+PLVE NPVE+VLVMTVEPGFGGQKFMPEMM+KVR L Sbjct: 7 AKIAPSMLSSDFANLAAEADRMVRLGADWLHMDIMDGHFVPNLTIGAPVIQSLRKHTKAYLDCHLMVTNPSDYVEPLAKAGASGFTFHIEVSRDNWQELIQSIKAKGMRPGVSLRPGTPVEEVFPLVEAENPVELVLVMTVEPGFGGQKFMPEMMEKVRAL 167
BLAST of FC876357 vs. ExPASy Swiss-Prot
Match: RPE_YEAST (Ribulose-phosphate 3-epimerase OS=Saccharomyces cerevisiae GN=RPE1 PE=1 SV=1) HSP 1 Score: 178.718 bits (452), Expect = 2.133e-44 Identity = 91/172 (52.91%), Postives = 118/172 (68.60%), Query Frame = 2 Query: 155 IAPSMLSSDFANLASEAERILNCGADWLHMDIMDGHFVPNLTIGAPVIESLR-------------KHTKAYLDCHLMVTNPLDYVEPLGKAGASGFTFHVEISKDNWQELVQRIKSKGMRPGVALKPGTSVEEVYPLVEGANPVEMVLVMTVEPGFGGQKFMPEMMDKVRTL 631 IAPS+L+SDFANL E +++N GADWLH+D+MDGHFVPN+T+G P++ SLR K A+ DCH+MV NP +V+ K GA FTFH E ++D LV+ IKSKG++ A+KPGTSV+ ++ L A ++M LVMTVEPGFGGQKFM +MM KV TL Sbjct: 6 IAPSILASDFANLGCECHKVINAGADWLHIDVMDGHFVPNITLGQPIVTSLRRSVPRPGDASNTEKKPTAFFDCHMMVENPEKWVDDFAKCGADQFTFHYEATQDP-LHLVKLIKSKGIKAACAIKPGTSVDVLFEL---APHLDMALVMTVEPGFGGQKFMEDMMPKVETL 173
BLAST of FC876357 vs. ExPASy Swiss-Prot
Match: RPE_HUMAN (Ribulose-phosphate 3-epimerase OS=Homo sapiens GN=RPE PE=1 SV=1) HSP 1 Score: 174.096 bits (440), Expect = 5.255e-43 Identity = 89/167 (53.29%), Postives = 120/167 (71.86%), Query Frame = 2 Query: 137 MGVTAKIAPSMLSSDFANLASEAERILNCGADWLHMDIMDGHFVPNLTIGAPVIESLRKH--TKAYLDCHLMVTNPLDYVEPLGKAGASGFTFHVEISKDNWQELVQRIKSKGMRPGVALKPGTSVEEVYPLVEGANPVEMVLVMTVEPGFGGQKFMPEMMDKVRTL 631 M KI PS+L+SD ANL +E R+L+ GAD+LH+D+MDGHFVPN+T G PV+ESLRK + D H+MV+ P +V+P+ AGA+ +TFH+E + +N L++ I+ GM+ G+A+KPGTSVE + P AN ++M LVMTVEPGFGGQKFM +MM KV L Sbjct: 1 MASGCKIGPSILNSDLANLGAECLRMLDSGADYLHLDVMDGHFVPNITFGHPVVESLRKQLGQDPFFDMHMMVSKPEQWVKPMAVAGANQYTFHLE-ATENPGALIKDIRENGMKVGLAIKPGTSVEYLAP---WANQIDMALVMTVEPGFGGQKFMEDMMPKVHWL 163
BLAST of FC876357 vs. ExPASy Swiss-Prot
Match: RPE_MOUSE (Ribulose-phosphate 3-epimerase OS=Mus musculus GN=Rpe PE=2 SV=1) HSP 1 Score: 172.94 bits (437), Expect = 1.171e-42 Identity = 88/167 (52.69%), Postives = 120/167 (71.86%), Query Frame = 2 Query: 137 MGVTAKIAPSMLSSDFANLASEAERILNCGADWLHMDIMDGHFVPNLTIGAPVIESLRKH--TKAYLDCHLMVTNPLDYVEPLGKAGASGFTFHVEISKDNWQELVQRIKSKGMRPGVALKPGTSVEEVYPLVEGANPVEMVLVMTVEPGFGGQKFMPEMMDKVRTL 631 M KI PS+L+SD ANL +E R+L+ GAD+LH+D+MDGHFVPN+T G PV+ESLRK + D H+MV+ P +V+P+ AGA+ +TFH+E + +N L++ I+ GM+ G+A+KPGT+VE + P AN ++M LVMTVEPGFGGQKFM +MM KV L Sbjct: 1 MASGCKIGPSILNSDLANLGAECLRMLDSGADYLHLDVMDGHFVPNITFGHPVVESLRKQLGQDPFFDMHMMVSRPEQWVKPMAVAGANQYTFHLE-ATENPGALIKDIRENGMKVGLAIKPGTTVEYLAP---WANQIDMALVMTVEPGFGGQKFMEDMMPKVHWL 163
BLAST of FC876357 vs. ExPASy Swiss-Prot
Match: RPE_PONAB (Ribulose-phosphate 3-epimerase OS=Pongo abelii GN=RPE PE=2 SV=1) HSP 1 Score: 172.17 bits (435), Expect = 1.997e-42 Identity = 88/167 (52.69%), Postives = 119/167 (71.26%), Query Frame = 2 Query: 137 MGVTAKIAPSMLSSDFANLASEAERILNCGADWLHMDIMDGHFVPNLTIGAPVIESLRKH--TKAYLDCHLMVTNPLDYVEPLGKAGASGFTFHVEISKDNWQELVQRIKSKGMRPGVALKPGTSVEEVYPLVEGANPVEMVLVMTVEPGFGGQKFMPEMMDKVRTL 631 M KI PS+L+SD ANL +E R+L+ GAD+LH+D+MDGHFVPN+T G PV+ESLRK + D H+MV+ P +V+P+ AGA+ + FH+E + +N L++ I+ GM+ G+A+KPGTSVE + P AN ++M LVMTVEPGFGGQKFM +MM KV L Sbjct: 1 MASGCKIGPSILNSDLANLGAECLRMLDSGADYLHLDVMDGHFVPNITFGHPVVESLRKQLGQDPFFDMHMMVSKPEQWVKPMAVAGANQYAFHLE-ATENPGALIKDIRENGMKVGLAIKPGTSVEYLAP---WANQIDMALVMTVEPGFGGQKFMEDMMPKVHWL 163
BLAST of FC876357 vs. ExPASy Swiss-Prot
Match: RPE_ASHGO (Ribulose-phosphate 3-epimerase OS=Ashbya gossypii GN=RPE1 PE=3 SV=1) HSP 1 Score: 171.785 bits (434), Expect = 2.608e-42 Identity = 89/170 (52.35%), Postives = 117/170 (68.82%), Query Frame = 2 Query: 155 IAPSMLSSDFANLASEAERILNCGADWLHMDIMDGHFVPNLTIGAPVIESLRK-----------HTKAYLDCHLMVTNPLDYVEPLGKAGASGFTFHVEISKDNWQELVQRIKSKGMRPGVALKPGTSVEEVYPLVEGANPVEMVLVMTVEPGFGGQKFMPEMMDKVRTL 631 IAPS+L+SDFANL R++N GA+WLH+D+MDGHFVPN+T+G P+++SLRK KA+ DCH+MV P +V+ + GA FTFH E +K N ELV+ IKS+G+R A+KP T V+ ++ L A ++M LVMTVEPGFGGQKFMP+MM KV L Sbjct: 6 IAPSILASDFANLECGCHRVINAGAEWLHIDVMDGHFVPNITLGPPIVKSLRKAVPRVGDKESDKPKAFFDCHMMVAEPEKWVDVFVENGADQFTFHYEATK-NPLELVKLIKSRGIRAACAIKPDTPVDVLFEL---APYLDMALVMTVEPGFGGQKFMPDMMPKVAAL 171
BLAST of FC876357 vs. ExPASy Swiss-Prot
Match: RPE_CANGA (Ribulose-phosphate 3-epimerase OS=Candida glabrata GN=RPE1 PE=3 SV=1) HSP 1 Score: 171.014 bits (432), Expect = 4.448e-42 Identity = 88/175 (50.29%), Postives = 114/175 (65.14%), Query Frame = 2 Query: 155 IAPSMLSSDFANLASEAERILNCGADWLHMDIMDGHFVPNLTIGAPVIESLRK----------------HTKAYLDCHLMVTNPLDYVEPLGKAGASGFTFHVEISKDNWQELVQRIKSKGMRPGVALKPGTSVEEVYPLVEGANPVEMVLVMTVEPGFGGQKFMPEMMDKVRTL 631 IAPS+L+SDFANL E R++N GA+WLH+D+MDGHFVPN+T+G P++ SLR+ A+ DCH+MV P +V KAGA FTFH E +KD LV+ IK G++ A+KPGT V+ ++ L A ++M LVMTVEPGFGGQKFMP+MM KV L Sbjct: 6 IAPSILASDFANLGCECHRVINSGAEWLHIDVMDGHFVPNITLGQPIVTSLRRAVPRSQEEEKASGEVARPTAFFDCHMMVEEPEKWVADFAKAGADQFTFHYEATKDP-LSLVKLIKENGIKAACAIKPGTPVDVLFEL---APYLDMALVMTVEPGFGGQKFMPDMMPKVEAL 176
BLAST of FC876357 vs. ExPASy Swiss-Prot
Match: RPE_SCHPO (Ribulose-phosphate 3-epimerase OS=Schizosaccharomyces pombe GN=SPAC31G5.05c PE=2 SV=1) HSP 1 Score: 169.088 bits (427), Expect = 1.690e-41 Identity = 89/166 (53.61%), Postives = 113/166 (68.07%), Query Frame = 2 Query: 143 VTAKIAPSMLSSDFANLASEAERILNCGADWLHMDIMDGHFVPNLTIGAPVIESLRKH---TKAYLDCHLMVTNPLDYVEPLGKAGASGFTFHVEISKDNWQELVQRIKSKGMRPGVALKPGTSVEEVYPLVEGANPVEMVLVMTVEPGFGGQKFMPEMMDKVRTL 631 V AKIAPS+L+ DFANL E R+L G+DWLH+D+MD FVPNLTIG V++++R H +A+ DCHLMV P Y++ L AGAS F FH E ++ + +E++ R KGM G ALKP T VE + P VE ++MVLVMTVEPG GGQ FMPE + KV L Sbjct: 2 VQAKIAPSLLAGDFANLEKEVGRMLKYGSDWLHVDVMDAQFVPNLTIGPIVVKAMRNHYTKEEAFFDCHLMVIEPERYIDQLADAGASLFCFHYEATEKH-EEIISRAHEKGMLVGCALKPKTPVEVILPFVE---KLDMVLVMTVEPGKGGQSFMPECLPKVEFL 163
BLAST of FC876357 vs. ExPASy Swiss-Prot
Match: RPE_MYCTU (Ribulose-phosphate 3-epimerase OS=Mycobacterium tuberculosis GN=rpe PE=3 SV=1) HSP 1 Score: 156.377 bits (394), Expect = 1.134e-37 Identity = 80/159 (50.31%), Postives = 111/159 (69.81%), Query Frame = 2 Query: 155 IAPSMLSSDFANLASEAERILNCGADWLHMDIMDGHFVPNLTIGAPVIESLRKHTKAYLDCHLMVTNPLDYVEPLGKAGASGFTFHVEISKDNWQELVQRIKSKGMRPGVALKPGTSVEEVYPLVEGANPVEMVLVMTVEPGFGGQKFMPEMMDKVRTL 631 IAPS+L++DFA LA EA + GADWLH+D+MDGHFVPNLTIG PV+ESL T +DCHLM+ NP + P +AGA TFH E + DN + + I++ G + G+++KPGT +E P ++ + +LVM+VEPGFGGQ+F+PE++ KVR + Sbjct: 10 IAPSILAADFARLADEAAAVN--GADWLHVDVMDGHFVPNLTIGLPVVESLLAVTDIPMDCHLMIDNPDRWAPPYAEAGAYNVTFHAE-ATDNPVGVARDIRAAGAKAGISVKPGTPLE---PYLDILPHFDTLLVMSVEPGFGGQRFIPEVLSKVRAV 162
BLAST of FC876357 vs. ExPASy Swiss-Prot
Match: RPE_MYCBO (Ribulose-phosphate 3-epimerase OS=Mycobacterium bovis GN=rpe PE=3 SV=1) HSP 1 Score: 156.377 bits (394), Expect = 1.134e-37 Identity = 80/159 (50.31%), Postives = 111/159 (69.81%), Query Frame = 2 Query: 155 IAPSMLSSDFANLASEAERILNCGADWLHMDIMDGHFVPNLTIGAPVIESLRKHTKAYLDCHLMVTNPLDYVEPLGKAGASGFTFHVEISKDNWQELVQRIKSKGMRPGVALKPGTSVEEVYPLVEGANPVEMVLVMTVEPGFGGQKFMPEMMDKVRTL 631 IAPS+L++DFA LA EA + GADWLH+D+MDGHFVPNLTIG PV+ESL T +DCHLM+ NP + P +AGA TFH E + DN + + I++ G + G+++KPGT +E P ++ + +LVM+VEPGFGGQ+F+PE++ KVR + Sbjct: 10 IAPSILAADFARLADEAAAVN--GADWLHVDVMDGHFVPNLTIGLPVVESLLAVTDIPMDCHLMIDNPDRWAPPYAEAGAYNVTFHAE-ATDNPVGVARDIRAAGAKAGISVKPGTPLE---PYLDILPHFDTLLVMSVEPGFGGQRFIPEVLSKVRAV 162 The following BLAST results are available for this feature:
BLAST of FC876357 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 41
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876357 ID=FC876357; Name=FC876357; organism=Citrus clementina; type=EST; length=633bpback to top |