FC876741
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC876741 vs. ExPASy Swiss-Prot
Match: RN181_XENLA (E3 ubiquitin-protein ligase rnf181 OS=Xenopus laevis GN=rnf181 PE=2 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 2.237e-16 Identity = 39/90 (43.33%), Postives = 60/90 (66.67%), Query Frame = 2 Query: 401 PPASKASVEAMPSIKVGESEEEALGGECVVCLEEYEVGEVAREMPCKHKFHANCIEKWLGIQGSCPVCRYKMPVEEEESGN-KRDEARRE 667 PPASK VE++P + V + +A +C VCL E+E GE R++PC+H FH+ CI WLG SCP+CR+++P + + K+++ARR+ Sbjct: 53 PPASKKVVESLPKVTVTPEQADA-ALKCPVCLLEFEEGETVRQLPCEHLFHSACILPWLGKTNSCPLCRHELPTDSPDYEEFKQEKARRQ 141
BLAST of FC876741 vs. ExPASy Swiss-Prot
Match: RN181_RAT (E3 ubiquitin-protein ligase RNF181 OS=Rattus norvegicus GN=Rnf181 PE=1 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 2.237e-16 Identity = 40/90 (44.44%), Postives = 59/90 (65.56%), Query Frame = 2 Query: 401 PPASKASVEAMPSIKVGESEEEALGGECVVCLEEYEVGEVAREMPCKHKFHANCIEKWLGIQGSCPVCRYKMPVEEEE-SGNKRDEARRE 667 PPA+KA VE++P + S+ E +C VCL E+E E EMPC H FH+NCI WL SCP+CR+++P +++ +K+D+ARR+ Sbjct: 64 PPAAKAVVESLPRTVIRSSKAEL---KCPVCLLEFEEEETVIEMPCHHLFHSNCILPWLSKTNSCPLCRHELPTDDDSYEEHKKDKARRQ 150
BLAST of FC876741 vs. ExPASy Swiss-Prot
Match: RN181_XENTR (E3 ubiquitin-protein ligase rnf181 OS=Xenopus tropicalis GN=rnf181 PE=2 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 2.922e-16 Identity = 37/88 (42.05%), Postives = 56/88 (63.64%), Query Frame = 2 Query: 401 PPASKASVEAMPSIKVGESEEEALGGECVVCLEEYEVGEVAREMPCKHKFHANCIEKWLGIQGSCPVCRYKMPVEEEESGNKRDEARR 664 PPA+K VE++P + V + +A +C VCL E+E GE R++PC+H FH++CI WLG SCP+CR+++P + E + E R Sbjct: 53 PPAAKKVVESLPKVTVTPEQADA-ALKCPVCLLEFEEGETVRQLPCEHLFHSSCILPWLGKTNSCPLCRHELPTDSPEYEEYKQEKER 139
BLAST of FC876741 vs. ExPASy Swiss-Prot
Match: RN181_MOUSE (E3 ubiquitin-protein ligase RNF181 OS=Mus musculus GN=Rnf181 PE=2 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 3.817e-16 Identity = 38/90 (42.22%), Postives = 59/90 (65.56%), Query Frame = 2 Query: 401 PPASKASVEAMPSIKVGESEEEALGGECVVCLEEYEVGEVAREMPCKHKFHANCIEKWLGIQGSCPVCRYKMPVEEEE-SGNKRDEARRE 667 PPA+KA VE++P + ++ + +C VCL E+E E EMPC H FH+NCI WL SCP+CR+++P +++ +K+D+ARR+ Sbjct: 64 PPAAKAVVESLPRTVISSAKADL---KCPVCLLEFEAEETVIEMPCHHLFHSNCILPWLSKTNSCPLCRHELPTDDDSYEEHKKDKARRQ 150
BLAST of FC876741 vs. ExPASy Swiss-Prot
Match: RN181_BOVIN (E3 ubiquitin-protein ligase RNF181 OS=Bos taurus GN=RNF181 PE=2 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 3.817e-16 Identity = 40/90 (44.44%), Postives = 59/90 (65.56%), Query Frame = 2 Query: 401 PPASKASVEAMPSIKVGESEEEALGGECVVCLEEYEVGEVAREMPCKHKFHANCIEKWLGIQGSCPVCRYKMPVEEEE-SGNKRDEARRE 667 PPA+K +VE +P + S+ E +C VCL E+E E A EMPC H FH+NCI WL SCP+CR+++P +++ +KRD+AR++ Sbjct: 52 PPAAKTAVENLPRTVIRGSQAEL---KCPVCLLEFEEEETAIEMPCHHLFHSNCILPWLSKTNSCPLCRHELPTDDDTYEEHKRDKARKQ 138
BLAST of FC876741 vs. ExPASy Swiss-Prot
Match: CIP8_ARATH (E3 ubiquitin-protein ligase CIP8 OS=Arabidopsis thaliana GN=CIP8 PE=1 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 8.502e-16 Identity = 39/111 (35.14%), Postives = 65/111 (58.56%), Query Frame = 2 Query: 341 IEGTSSLETLLRNFV--------GKDGQPPASKASVEAMPSIKVGESEEEALGGECVVCLEEYEVGEVAREMPCKHKFHANCIEKWLGIQGSCPVCRYKMPVEEEESGNKR 649 I+ + E LL+N G+ G PPA+K+++EA+ + +V SE E + C VC + +GE +++PC H +H +CI WLG + SCPVCR+++ ++ E +R Sbjct: 203 IDDAAGYEALLQNLAEGDGGGGGGRRGAPPAAKSAIEALETFEVSSSEGEMVM-VCAVCKDGMVMGETGKKLPCGHCYHGDCIVPWLGTRNSCPVCRFQLETDDAEYEEER 312
BLAST of FC876741 vs. ExPASy Swiss-Prot
Match: RN181_HUMAN (E3 ubiquitin-protein ligase RNF181 OS=Homo sapiens GN=RNF181 PE=1 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 1.894e-15 Identity = 39/90 (43.33%), Postives = 58/90 (64.44%), Query Frame = 2 Query: 401 PPASKASVEAMPSIKVGESEEEALGGECVVCLEEYEVGEVAREMPCKHKFHANCIEKWLGIQGSCPVCRYKMPVEEEE-SGNKRDEARRE 667 PPA+K VE +P + S+ E +C VCL E+E E A EMPC H FH++CI WL SCP+CRY++P +++ ++RD+AR++ Sbjct: 52 PPAAKTVVENLPRTVIRGSQAEL---KCPVCLLEFEEEETAIEMPCHHLFHSSCILPWLSKTNSCPLCRYELPTDDDTYEEHRRDKARKQ 138
BLAST of FC876741 vs. ExPASy Swiss-Prot
Match: RN126_MOUSE (RING finger protein 126 OS=Mus musculus GN=Rnf126 PE=1 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 2.474e-15 Identity = 39/87 (44.83%), Postives = 51/87 (58.62%), Query Frame = 2 Query: 347 GTSSLETLLRNFVGKDGQPPASKASVEAMPSIKVGESEEEALGGECVVCLEEYEVGEVAREMPCKHKFHANCIEKWLGIQGSCPVCR 607 G ++ T L N G PPA K ++A+P++ V E E G EC VC E+Y +GE R++PC H FH +CI WL SCPVCR Sbjct: 187 GLDTIITQLLNQFENTGPPPADKEKIQALPTVPVTE-EHVGSGLECPVCKEDYALGESVRQLPCNHLFHDSCIVPWLEQHDSCPVCR 272
BLAST of FC876741 vs. ExPASy Swiss-Prot
Match: RN115_HUMAN (RING finger protein 115 OS=Homo sapiens GN=RNF115 PE=1 SV=2) HSP 1 Score: 82.0333 bits (201), Expect = 3.231e-15 Identity = 38/107 (35.51%), Postives = 63/107 (58.88%), Query Frame = 2 Query: 347 GTSSLETLLRNFVGK---DGQPPASKASVEAMPSIKVGESEEEALGGECVVCLEEYEVGEVAREMPCKHKFHANCIEKWLGIQGSCPVCRYKMPVEEEESGNKRDEA 658 G + L+ ++ +G+ G PPA K + ++P++ V + E+ +G EC VC E+Y V E R++PC H FH++CI WL + +CPVCR + E+ ++ EA Sbjct: 181 GQTGLDAIVTQLLGQLENTGPPPADKEKITSLPTVTVTQ-EQVDMGLECPVCKEDYTVEEEVRQLPCNHFFHSSCIVPWLELHDTCPVCRKSLNGEDSTRQSQSTEA 286
BLAST of FC876741 vs. ExPASy Swiss-Prot
Match: RN181_DANRE (E3 ubiquitin-protein ligase rnf181 OS=Danio rerio GN=rnf181 PE=2 SV=2) HSP 1 Score: 81.6481 bits (200), Expect = 4.220e-15 Identity = 44/120 (36.67%), Postives = 65/120 (54.17%), Query Frame = 2 Query: 308 LVNPLNQGMVVIEGTSSLETLLRNFVGKDGQPPASKASVEAMPSIKVGESEEEALGGECVVCLEEYEVGEVAREMPCKHKFHANCIEKWLGIQGSCPVCRYKMPVEEEESGN-KRDEARR 664 L L QG+ + G+ L + PPA+KA V+++P + + + + G +C VCL E+E E REMPCKH FH CI WL SCP+CR ++P + + K+D+ RR Sbjct: 27 LARSLMQGLDIDSGSFDLSDWDQRL-----PPPAAKAVVQSLPVVIISPEQADK-GVKCPVCLLEFEEQESVREMPCKHLFHTGCILPWLNKTNSCPLCRLELPTDNADYEEFKKDKERR 140 The following BLAST results are available for this feature:
BLAST of FC876741 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 31
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876741 ID=FC876741; Name=FC876741; organism=Citrus clementina; type=EST; length=691bpback to top |