FC876836

Overview
NameFC876836
Unique NameFC876836
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length755
Libraries
Library NameType
EHRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC876836 vs. ExPASy Swiss-Prot
Match: C71BL_ARATH (Cytochrome P450 71B21 OS=Arabidopsis thaliana GN=CYP71B21 PE=2 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 6.426e-15
Identity = 48/150 (32.00%), Postives = 76/150 (50.67%), Query Frame = -1
Query:  321 LNDVDLVNLPYLCCVIKETXXXXXXXXXXXPHFSSENCIVGGYHIPRGTTIMVNAWAMHRDSKVWEEPNKFKPERF--EGIHSEREGFKHIPFGMGRRACPGAAMAIRTISFALGSLIQCFEWE----KIGAEVDMTASYGLSLFKTVPL 752
            + + DL  + YL  VI+ET           P  +  +  + GY+IP+ T I +N +A+ RD   W  PN+F PERF    I  + + F+ +PFG GRR CPG A  +  +   L +++  F+W        A+++M  +    + K VPL
Sbjct:  342 ITEQDLEKVHYLKLVIQETFRLHPPAPLLLPRETMSDVKIQGYNIPKNTMIEINTYAIGRDPNCWTNPNEFIPERFVDSPIDYKGQHFELLPFGGGRRICPGMATGMTIVELGLLNVLYFFDWSLPYGMAIADINMEEAGAFVIAKKVPL 491          
BLAST of FC876836 vs. ExPASy Swiss-Prot
Match: C71AG_ARATH (Cytochrome P450 71A16 OS=Arabidopsis thaliana GN=CYP71A16 PE=2 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 6.426e-15
Identity = 50/153 (32.68%), Postives = 75/153 (49.02%), Query Frame = -1
Query:  306 DLVNLPYLCCVIKETXXXXXXXXXXXPHFSSENCIVGGYHIPRGTTIMVNAWAMHRDSKVW-EEPNKFKPERFEGIHSEREG--FKHIPFGMGRRACPGAAMAIRTISFALGSLIQCFEWEKIGA-----EVDMTASYGLSLFKTVPLVAMCS 740
            ++ N+ YL  VIKE            P   SE+  + GY I  GT +++NAWA+ RD+  W  +  +F+PER      +  G  FK+IPFG GRR CPG  +     S  L +L++ F+W          + D+    G+ + +  PLV   S
Sbjct:  343 EVENMNYLKAVIKEVLRLHPPLPLLVPRLLSEDVKLKGYDITAGTQVIINAWAIQRDTATWGSDAQEFRPERHFDSTWDFVGRNFKYIPFGAGRRLCPGIGLGSVMASVTLANLVKRFDWRVEDGPSGYDKPDLVEGAGIDVCRKFPLVVFPS 495          
BLAST of FC876836 vs. ExPASy Swiss-Prot
Match: CP1A1_DICLA (Cytochrome P450 1A1 OS=Dicentrarchus labrax GN=cyp1a1 PE=2 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 8.393e-15
Identity = 44/139 (31.65%), Postives = 76/139 (54.68%), Query Frame = -1
Query:  339 DLVNLPYLCCVIKETXXXXXXXXXXXPHFSSENCIVGGYHIPRGTTIMVNAWAMHRDSKVWEEPNKFKPERF---EGIH-SEREGFKHIPFGMGRRACPGAAMAIRTISFALGSLIQCFEWEKI-GAEVDMTASYGLSL 740
            D  NLP+L   I E            PH +S++  + GY IP+ T + +N W ++ D ++W++P+ F P+RF   +G   ++ EG K + FG+G+R C G  +A   +   L  ++Q   ++ + G  +DMT  YGL++
Sbjct:  367 DRPNLPFLEAFILEIFRHSSFLPFTIPHCTSKDTSLNGYFIPKDTCVFINQWQINHDPELWKDPSSFNPDRFLSADGTELNKLEGEKVMVFGLGKRRCIGEVIARNGVFLFLAIIVQKLHFKTLPGEPLDMTPEYGLTM 505          
BLAST of FC876836 vs. ExPASy Swiss-Prot
Match: C71BS_ARATH (Cytochrome P450 71B28 OS=Arabidopsis thaliana GN=CYP71B28 PE=2 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 8.393e-15
Identity = 43/123 (34.96%), Postives = 64/123 (52.03%), Query Frame = -1
Query:  390 LNDVDLVNLPYLCCVIKETXXXXXXXXXXXPHFSSENCIVGGYHIPRGTTIMVNAWAMHRDSKVWEEPNKFKPERFEGIHSEREG--FKHIPFGMGRRACPGAAMAIRTISFALGSLIQCFEW 752
            + + DL  L Y   ++KE            P  +  +  + GY IP  T IM+NA+A+ RD K+W  P++F P+RF     +  G  F+ +PFG GRR CPG  M I  +   L +L+  F+W
Sbjct:  341 ITEEDLNQLHYFKLMVKEIFRLHPAAPLLLPRETLSHVKIQGYDIPAKTQIMINAYAIARDPKLWTNPDEFNPDRFLDSSIDYRGLNFELLPFGSGRRICPGMTMGIAIVELGLLNLLYFFDW 463          
BLAST of FC876836 vs. ExPASy Swiss-Prot
Match: CP1A1_PLEPL (Cytochrome P450 1A1 OS=Pleuronectes platessa GN=cyp1a1 PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.096e-14
Identity = 44/139 (31.65%), Postives = 74/139 (53.24%), Query Frame = -1
Query:  339 DLVNLPYLCCVIKETXXXXXXXXXXXPHFSSENCIVGGYHIPRGTTIMVNAWAMHRDSKVWEEPNKFKPERFEGIH----SEREGFKHIPFGMGRRACPGAAMAIRTISFALGSLIQCFEWEKI-GAEVDMTASYGLSL 740
            D  NLP+L   I E            PH ++++  + GY IP+ T + +N W ++ D ++W++P+ F P+RF        ++ +G K + FGMG+R C G  +A   +   L  +IQ   +  I G ++DMT  YGL++
Sbjct:  366 DKPNLPFLEAFILEILRHSSFLPFTIPHCTTKDTSLNGYFIPKDTCVFINQWQINHDPELWKDPSSFNPDRFLSADGSEVNKLDGEKVMAFGMGKRRCIGEVIARNEVYLFLAIIIQKLHFLPIPGEKLDMTPEYGLTM 504          
BLAST of FC876836 vs. ExPASy Swiss-Prot
Match: CP1A1_PLAFE (Cytochrome P450 1A1 OS=Platichthys flesus GN=cyp1a1 PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.096e-14
Identity = 44/139 (31.65%), Postives = 74/139 (53.24%), Query Frame = -1
Query:  339 DLVNLPYLCCVIKETXXXXXXXXXXXPHFSSENCIVGGYHIPRGTTIMVNAWAMHRDSKVWEEPNKFKPERFEGIH----SEREGFKHIPFGMGRRACPGAAMAIRTISFALGSLIQCFEWEKI-GAEVDMTASYGLSL 740
            D  NLP+L   I E            PH ++++  + GY IP+ T + +N W ++ D ++W++P+ F P+RF        ++ +G K + FGMG+R C G  +A   +   L  +IQ   +  I G ++DMT  YGL++
Sbjct:  366 DKPNLPFLEAFILEILRHSSFLPFTIPHCTTKDTSLNGYFIPKDTCVFINQWQINHDPELWKDPSSFNPDRFLSADGSEVNKLDGEKVMAFGMGKRRCIGEVIARNEVYLFLAIIIQKLHFLPIPGEKLDMTPEYGLTM 504          
BLAST of FC876836 vs. ExPASy Swiss-Prot
Match: CP306_DROME (Cytochrome P450 306a1 OS=Drosophila melanogaster GN=phm PE=1 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.432e-14
Identity = 51/141 (36.17%), Postives = 69/141 (48.94%), Query Frame = -1
Query:  330 DLVNLPYLCCVIKETXXXXXXXXXXXPHFSSENCIVGGYHIPRGTTIMVNAWAMHRDSKVWEEPNKFKPERF---EGIHSEREGFKHIPFGMGRRACPGAAMAIRTISFALGSLIQCFEWE-KIGAEVDMTASYGLSLFKT 740
            +L  L YL   I ET           PH   EN +VG Y I  G+ I+ + WA+H D   + EP +F+PERF   +G +     F  IPF  G R CPG  MA   ++   G +++ F  E   G EVDM    G++L  T
Sbjct:  411 ELEPLAYLRACISETMRIRSVVPLGIPHGCKENFVVGDYFIKGGSMIVCSEWAIHMDPVAFPEPEEFRPERFLTADGAYQAPPQF--IPFSSGYRMCPGEEMARMILTLFTGRILRRFHLELPSGTEVDMAGESGITLTPT 549          
BLAST of FC876836 vs. ExPASy Swiss-Prot
Match: CP1A2_BALAC (Cytochrome P450 1A2 OS=Balaenoptera acutorostrata GN=CYP1A2 PE=2 SV=3)

HSP 1 Score: 80.1073 bits (196), Expect = 1.432e-14
Identity = 47/139 (33.81%), Postives = 73/139 (52.52%), Query Frame = -1
Query:  339 DLVNLPYLCCVIKETXXXXXXXXXXXPHFSSENCIVGGYHIPRGTTIMVNAWAMHRDSKVWEEPNKFKPERFEGIH----SEREGFKHIPFGMGRRACPGAAMAIRTISFALGSLIQCFEWE-KIGAEVDMTASYGLSL 740
            D   LPYL   I ET           PH +  +  + G++IP+   + +N W ++ D K+W +P++F+PERF   H    S+    K + FGMG+R C G  +A   I   L  L+Q  E+    G +VD+T +YGL++
Sbjct:  361 DRSQLPYLEAFILETFRHSSFVPFTIPHSTIRDTTLNGFYIPKELCVFINQWQVNHDPKLWGDPSEFRPERFLTSHDTTISKTLSEKVMLFGMGKRRCIGEVLAKWEIFLFLAILLQQLEFSVPPGVKVDLTPTYGLTM 499          
BLAST of FC876836 vs. ExPASy Swiss-Prot
Match: CP1A1_LIZAU (Cytochrome P450 1A1 OS=Liza aurata GN=cyp1a1 PE=2 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.870e-14
Identity = 45/139 (32.37%), Postives = 74/139 (53.24%), Query Frame = -1
Query:  339 DLVNLPYLCCVIKETXXXXXXXXXXXPHFSSENCIVGGYHIPRGTTIMVNAWAMHRDSKVWEEPNKFKPERF---EGIHSER-EGFKHIPFGMGRRACPGAAMAIRTISFALGSLIQCFEWEKI-GAEVDMTASYGLSL 740
            D  NLP L   I E            PH ++++  + GY+IP+ T + +N W ++ D ++W+EP+ F P+RF   +G    + +G K + FG+G+R C G  +A   +   L  LIQ   +  + G  +DMT  YGL++
Sbjct:  366 DRNNLPLLEAFILEIFRHSSFLPFTIPHCTTKDTSLNGYYIPKDTCVFINQWQINHDPELWKEPSSFNPDRFLSADGTEVNKVDGEKVMVFGLGKRRCIGEVIARNEVYMFLAILIQKLHFYNLPGEPLDMTPEYGLTM 504          
BLAST of FC876836 vs. ExPASy Swiss-Prot
Match: CP1A1_FELCA (Cytochrome P450 1A1 OS=Felis catus GN=CYP1A1 PE=2 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.870e-14
Identity = 45/138 (32.61%), Postives = 75/138 (54.35%), Query Frame = -1
Query:  339 DLVNLPYLCCVIKETXXXXXXXXXXXPHFSSENCIVGGYHIPRGTTIMVNAWAMHRDSKVWEEPNKFKPERF---EGIHSEREGFKHIPFGMGRRACPGAAMAIRTISFALGSLIQCFEWE-KIGAEVDMTASYGLSL 740
            D + LPY+   I E            PH ++++  + G++IP+   + VN W ++ D K+W +P++F+PERF   +G  ++    K I FG+G+R C G  +A   +   L  L+Q  E+    G +VDMT  YGL++
Sbjct:  366 DRLQLPYMEAFILEMFRHTSFVPFTIPHSTTKDTSLSGFYIPKERCVFVNQWQINHDQKLWGDPSEFRPERFLTPDGTINKALSEKVILFGLGKRKCIGETIARLEVFLFLAILLQQVEFSVPQGTKVDMTPIYGLTM 503          
The following BLAST results are available for this feature:
BLAST of FC876836 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 242
Match NameE-valueIdentityDescription
C71BL_ARATH6.426e-1532.00Cytochrome P450 71B21 OS=Arabidopsis thaliana GN=C... [more]
C71AG_ARATH6.426e-1532.68Cytochrome P450 71A16 OS=Arabidopsis thaliana GN=C... [more]
CP1A1_DICLA8.393e-1531.65Cytochrome P450 1A1 OS=Dicentrarchus labrax GN=cyp... [more]
C71BS_ARATH8.393e-1534.96Cytochrome P450 71B28 OS=Arabidopsis thaliana GN=C... [more]
CP1A1_PLEPL1.096e-1431.65Cytochrome P450 1A1 OS=Pleuronectes platessa GN=cy... [more]
CP1A1_PLAFE1.096e-1431.65Cytochrome P450 1A1 OS=Platichthys flesus GN=cyp1a... [more]
CP306_DROME1.432e-1436.17Cytochrome P450 306a1 OS=Drosophila melanogaster G... [more]
CP1A2_BALAC1.432e-1433.81Cytochrome P450 1A2 OS=Balaenoptera acutorostrata ... [more]
CP1A1_LIZAU1.870e-1432.37Cytochrome P450 1A1 OS=Liza aurata GN=cyp1a1 PE=2 ... [more]
CP1A1_FELCA1.870e-1432.61Cytochrome P450 1A1 OS=Felis catus GN=CYP1A1 PE=2 ... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAN3BA08RM1 EHR Citrus clementina cDNA clone KN0AAN3BA08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876836 ID=FC876836; Name=FC876836; organism=Citrus clementina; type=EST; length=755bp
TTTTTTTTTTTTTTTTTTTTTTTTTTTTACATAATTTTGCAGTTGGCAAT
GACTGTTGAAATCAAACCGATATTAAAAAACTACAGCAAAACCACAAAAC
AGGATTATCAAATCTAAAATTTGGTCACGCAATGCCATGGCATGAAGTGA
TCTACAGTCTCTAAAGTACTGCTCTACAAATTCCAGTAAATTTTACAACC
TTTATTGAAAGTCACCTGCAAGGTCCCCTGCAGGCCCCGAAAATTTCCAG
CGGCAAGTTTACCCTAACTGGATCTGTTCAGCATTCCAATCATATTTTGC
CGCGGACTGCACATAGCCACCAAAGGCACGGTCTTAAATAGAGATAGTCC
ATAACTTGCAGTCATGTCCACCTCCGCCCCTATCTTTTCCCACTCGAAGC
ACTGTATGAGCGAACCCAAAGCAAAAGAAATTGTACGGATAGCCATGGCT
GCACCTGGGCAAGCTCTCCTCCCCATGCCAAATGGAATATGTTTGAATCC
CTCTCTTTCACTATGAATCCCTTCAAATCTTTCAGGTTTGAACTTGTTAG
GCTCCTCCCACACCTTGGAATCCCTATGCATTGCCCAGGCATTCACCATT
ATCGTCGTGCCTCGTGGTATGTGATATCCACCCACTATGCAGTTCTCAGA
AGAAAAATGTGGCAACAGAAGTGGTGCCGGAGGATATAATCGCAGCGTCT
CTTTTATGACACAGCAAAGGTATGGAAGGTTGACAAGATCCACGTCATTT
AACAT
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