FC876836

Overview
NameFC876836
Unique NameFC876836
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length755
Libraries
Library NameType
EHRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC876836 vs. ExPASy Swiss-Prot
Match: C75A4_GENTR (Flavonoid 3',5'-hydroxylase OS=Gentiana triflora GN=CYP75A4 PE=2 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 7.573e-24
Identity = 69/165 (41.82%), Postives = 90/165 (54.55%), Query Frame = -1
Query:  300 LNDVDLVNLPYLCCVIKETXXXXXXXXXXXPHFSSENCI-----VGGYHIPRGTTIMVNAWAMHRDSKVW-EEPNKFKPERF-----EGIHSEREGFKHIPFGMGRRACPGAAMAIRTISFALGSLIQCFEWEKIG---AEVDMTASYGLSLFKTVPLVAMCSPR 752
            L + D+ NLPYL  + KET           P     NCI     V GY+IP+GT + VN WA+ RD  VW + PN+F PERF       I      F+ IPFG GRR C G  M I  + + LG+L+  F+W K+G    E++M  ++GL+L K VPL AM  PR
Sbjct:  349 LLESDIPNLPYLQAICKETFRKHPSTPLNLPR----NCIRGHVDVNGYYIPKGTRLNVNIWAIGRDPSVWGDNPNEFDPERFLYGRNAKIDPRGNHFELIPFGAGRRICAGTRMGILLVEYILGTLVHSFDW-KLGFSEDELNMDETFGLALQKAVPLAAMVIPR 508          
BLAST of FC876836 vs. ExPASy Swiss-Prot
Match: C93A2_SOYBN (Cytochrome P450 93A2 OS=Glycine max GN=CYP93A2 PE=2 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.292e-23
Identity = 57/161 (35.40%), Postives = 90/161 (55.90%), Query Frame = -1
Query:  294 MLNDVDLVNLPYLCCVIKETXXXXXXXXXXXPHFSSENCIVGGYHIPRGTTIMVNAWAMHRDSKVWEEPNKFKPERF-----EGIHSEREGFKHIPFGMGRRACPGAAMAIRTISFALGSLIQCFEW--EKIGAEVDMTASYGLSLFKTVPLVAMCSPRQN 755
            ++ + D+VNLPYL  +++ET              SS++ +V GY IP  T + VN WA+ RD   WE P +F+PERF       +    + +  IPFG GRR+CPG ++A++ +   L  +IQCF+W  +    +VDM    G++L +  P++ +  PR N
Sbjct:  338 IIEESDIVNLPYLQAIVRETLRIHPGGPLIVRE-SSKSVVVCGYEIPAKTRLFVNVWAIGRDPNHWENPFEFRPERFFENGQSQLDVRGQHYHFIPFGSGRRSCPGTSLALQIVHVNLAIMIQCFQWKFDNGNNKVDMEEKSGITLPRAHPIICVPVPRLN 497          
BLAST of FC876836 vs. ExPASy Swiss-Prot
Match: C76C4_ARATH (Cytochrome P450 76C4 OS=Arabidopsis thaliana GN=CYP76C4 PE=2 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.292e-23
Identity = 56/161 (34.78%), Postives = 94/161 (58.39%), Query Frame = -1
Query:  291 MLNDVDLVNLPYLCCVIKETXXXXXXXXXXXPHFSSENCIVGGYHIPRGTTIMVNAWAMHRDSKVWEEPNKFKPERFEGIHSEREG--FKHIPFGMGRRACPGAAMAIRTISFALGSLIQCFEWE----KIGAEVDMTASYGLSLFKTVPLVAMCSPRQNM 755
            ++ + D+  LPYL  V+KET           P  +  +  V G+ +P+ T ++VN WA+ RD  VWE P++F+PERF G   + +G  ++  PFG GRR CPG  +A++T+S  L SL+  F+W+     +  ++DM  ++G++L +T  L A+   +Q +
Sbjct:  350 VVQESDISGLPYLQAVVKETFRLHPAAPLLVPRKAESDVEVLGFMVPKDTQVLVNVWAIGRDPSVWENPSQFEPERFMGKDIDVKGRDYELTPFGGGRRICPGLPLAVKTVSLMLASLLYSFDWKLPNGVVSEDLDMDETFGITLHRTNTLYAIPVKKQTI 510          
BLAST of FC876836 vs. ExPASy Swiss-Prot
Match: C71C2_MAIZE (Cytochrome P450 71C2 OS=Zea mays GN=CYP71C2 PE=2 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.292e-23
Identity = 58/147 (39.46%), Postives = 82/147 (55.78%), Query Frame = -1
Query:  339 MLNDVDLVNLPYLCCVIKETXXXXXXXXXXXPHFSSENCIVGGYHIPRGTTIMVNAWAMHRDSKVWEEPNKFKPERF------EGIHSEREGFKHIPFGMGRRACPGAAMAIRTISFALGSLIQCFEWE--KIGAEVDMTASYGLSL 755
            ML + DL ++PYL   IKET           PH+S+ +  + GY +P GT ++V+AWA+ RD   WE+P +F PERF        +H + +  + IPFG GRR CPG      T+   L +L+  F+WE    GA V M  S+GL+L
Sbjct:  376 MLAEEDLGSMPYLKATIKETLRLHPPAPFLLPHYSTADSEIDGYFVPAGTRVLVHAWALGRDRTTWEKPEEFMPERFVQEPGAVDVHMKGKDLRFIPFGSGRRICPGMNFGFATMEVMLANLMYHFDWEVPGSGAGVSMEESFGLTL 522          
BLAST of FC876836 vs. ExPASy Swiss-Prot
Match: C71A8_MENPI (Cytochrome P450 71A8 OS=Mentha piperita GN=CYP71A8 PE=3 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.292e-23
Identity = 58/151 (38.41%), Postives = 87/151 (57.62%), Query Frame = -1
Query:  312 LNDVDLVNLPYLCCVIKETXXXXXXXXXXXPHFSSENCIVGGYHIPRGTTIMVNAWAMHRDSKVWEEPNKFKPERFEGIHSEREG--FKHIPFGMGRRACPGAAMAIRTISFALGSLIQCFEWE--KIGAEVDMTASYGLSLFKTVPLVAM 752
            + D D+  + YL  V+KET           P  +  +  V GY +P GT +M+NAWA+ RD   W+EP KF+PERF     + +G  F+ IPFG GRR CPG    + T+ F L +L+Q F+WE      E+DM+   G+++ + +PL+A+
Sbjct:  348 ITDDDIEKMHYLKAVMKETMRFHTPIPLLVPRVARNDVEVMGYDVPVGTMVMINAWAIGRDPTSWDEPEKFRPERFLNSSVDFKGLDFELIPFGAGRRGCPGTTFPMATLEFTLANLMQKFDWELPHECRELDMSERPGVAIRRVIPLLAI 498          
BLAST of FC876836 vs. ExPASy Swiss-Prot
Match: C76C2_ARATH (Cytochrome P450 76C2 OS=Arabidopsis thaliana GN=CYP76C2 PE=2 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 2.204e-23
Identity = 59/154 (38.31%), Postives = 90/154 (58.44%), Query Frame = -1
Query:  312 MLNDVDLVNLPYLCCVIKETXXXXXXXXXXXPHFSSENCIVGGYHIPRGTTIMVNAWAMHRDSKVWEEPNKFKPERFEGIHSEREG--FKHIPFGMGRRACPGAAMAIRTISFALGSLIQCFEWE---KIGAE-VDMTASYGLSLFKTVPLVAM 755
            ++ + D+  LPYL  V+KET           P  +  +  V G+ +P+ T + VN WA+ RD  VWE  ++FKPERF G   +  G  ++  PFG GRR CPG  +A++T+   L SL+  F+W+    +G+E +DM  ++GL+L KT PL A+
Sbjct:  351 VVEESDISALPYLQAVVKETFRLHPAAPLLVPRKAESDVEVLGFMVPKDTQVFVNVWAIGRDPNVWENSSRFKPERFLGKDIDLRGRDYELTPFGAGRRICPGLPLAVKTVPLMLASLLYSFDWKLPNGVGSEDLDMDETFGLTLHKTNPLHAV 504          
BLAST of FC876836 vs. ExPASy Swiss-Prot
Match: C76C3_ARATH (Cytochrome P450 76C3 OS=Arabidopsis thaliana GN=CYP76C3 PE=2 SV=2)

HSP 1 Score: 108.997 bits (271), Expect = 2.878e-23
Identity = 57/153 (37.25%), Postives = 91/153 (59.48%), Query Frame = -1
Query:  312 LNDVDLVNLPYLCCVIKETXXXXXXXXXXXPHFSSENCIVGGYHIPRGTTIMVNAWAMHRDSKVWEEPNKFKPERFEGIHSEREG--FKHIPFGMGRRACPGAAMAIRTISFALGSLIQCFEWE----KIGAEVDMTASYGLSLFKTVPLVAM 752
            + + D+ +LPYL  ++KET               S+  I+G + +P+ T ++VN WA+ RD+ VWE P KF+PERF    ++ +G  F+ IPFG GRR CPG +MA++T+   L SL+  F+W+     +   +DM+ ++GL+L K   L A+
Sbjct:  353 VQESDIPSLPYLQAIVKETLRLHPAAPLIPRKSESDVQIMG-FLVPKNTQVVVNVWAIGRDASVWENPMKFEPERFLLRETDVKGRDFELIPFGSGRRMCPGISMALKTMHMVLASLLYSFDWKLQNGVVPGNIDMSETFGLTLHKAKSLCAV 504          
BLAST of FC876836 vs. ExPASy Swiss-Prot
Match: C76C1_ARATH (Cytochrome P450 76C1 OS=Arabidopsis thaliana GN=CYP76C1 PE=2 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 6.411e-23
Identity = 55/154 (35.71%), Postives = 90/154 (58.44%), Query Frame = -1
Query:  312 MLNDVDLVNLPYLCCVIKETXXXXXXXXXXXPHFSSENCIVGGYHIPRGTTIMVNAWAMHRDSKVWEEPNKFKPERFEGIHSEREG--FKHIPFGMGRRACPGAAMAIRTISFALGSLIQCFEWE----KIGAEVDMTASYGLSLFKTVPLVAM 755
            ++ + D+  LPYL  V+KET           P  +  +  + G+ + + T ++VN WA+ RD  VW+ P++F+PERF G   +  G  ++  PFG GRR CPG  +A++T+S  L SL+  F+W+     +  ++DM  ++GL+L KT PL A+
Sbjct:  350 IVEESDISKLPYLQAVVKETFRLHTPVPLLIPRKAESDAEILGFMVLKDTQVLVNVWAIGRDPSVWDNPSQFEPERFLGKDMDVRGRDYELTPFGAGRRICPGMPLAMKTVSLMLASLLYSFDWKLPKGVLSEDLDMDETFGLTLHKTNPLHAV 503          
BLAST of FC876836 vs. ExPASy Swiss-Prot
Match: C71C3_MAIZE (Cytochrome P450 71C3 OS=Zea mays GN=CYP71C3 PE=2 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 3.182e-22
Identity = 55/151 (36.42%), Postives = 80/151 (52.98%), Query Frame = -1
Query:  339 MLNDVDLVNLPYLCCVIKETXXXXXXXXXXXPHFSSENCIVGGYHIPRGTTIMVNAWAMHRDSKVWEEPNKFKPERF------EGIHSEREGFKHIPFGMGRRACPGAAMAIRTISFALGSLIQCFEWEKIGA------EVDMTASYGLSL 755
            M+ + DL +LPYL   +KE            PH+S+ +C + GYHIP    ++VN WA+ RD  VWE+P +F PERF      +      + F+++PFG GRR CPGA   + T+   L +L+  F+WE          +V M   +GL L
Sbjct:  371 MIREDDLSSLPYLKASMKEALRLHPPGPLLLPHYSTADCQIDGYHIPANPRVLVNGWAIGRDPAVWEKPEEFMPERFMRDGWDKSNSYSGQDFRYLPFGSGRRICPGANFGLATMEIMLANLMYHFDWEVPNEKEDGCWKVSMDEKFGLML 521          
BLAST of FC876836 vs. ExPASy Swiss-Prot
Match: C82A1_PEA (Cytochrome P450 82A1 (Fragment) OS=Pisum sativum GN=CYP82A1 PE=2 SV=2)

HSP 1 Score: 103.99 bits (258), Expect = 9.258e-22
Identity = 54/155 (34.84%), Postives = 80/155 (51.61%), Query Frame = -1
Query:  303 LNDVDLVNLPYLCCVIKETXXXXXXXXXXXPHFSSENCIVGGYHIPRGTTIMVNAWAMHRDSKVWEEPNKFKPERFEGIHSE----REGFKHIPFGMGRRACPGAAMAIRTISFALGSLIQCFEWEKIGAE-VDMTASYGLSLFKTVPLVAMCSP 752
            +N+ D+  L YL  +IKET           P   +E+C +GGYHI +GT +M N W +HRD  VW +P +FKPERF   H +     + F+ +PFG GRR C G ++ +  + + L + +  FE      E +D+T        K  PL  +  P
Sbjct:  380 VNESDINKLVYLHAIIKETLRLYPPAPFSSPREFTEDCTIGGYHIKKGTRLMPNLWKIHRDPSVWPDPLEFKPERFLSTHKDVDVRGQNFELLPFGSGRRMCAGMSLGLHMVHYILANFLHSFEILNPSPESIDVTEVLEFVTTKATPLEVLVKP 534          
The following BLAST results are available for this feature:
BLAST of FC876836 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 242
Match NameE-valueIdentityDescription
C75A4_GENTR7.573e-2441.82Flavonoid 3',5'-hydroxylase OS=Gentiana triflora G... [more]
C93A2_SOYBN1.292e-2335.40Cytochrome P450 93A2 OS=Glycine max GN=CYP93A2 PE=... [more]
C76C4_ARATH1.292e-2334.78Cytochrome P450 76C4 OS=Arabidopsis thaliana GN=CY... [more]
C71C2_MAIZE1.292e-2339.46Cytochrome P450 71C2 OS=Zea mays GN=CYP71C2 PE=2 S... [more]
C71A8_MENPI1.292e-2338.41Cytochrome P450 71A8 OS=Mentha piperita GN=CYP71A8... [more]
C76C2_ARATH2.204e-2338.31Cytochrome P450 76C2 OS=Arabidopsis thaliana GN=CY... [more]
C76C3_ARATH2.878e-2337.25Cytochrome P450 76C3 OS=Arabidopsis thaliana GN=CY... [more]
C76C1_ARATH6.411e-2335.71Cytochrome P450 76C1 OS=Arabidopsis thaliana GN=CY... [more]
C71C3_MAIZE3.182e-2236.42Cytochrome P450 71C3 OS=Zea mays GN=CYP71C3 PE=2 S... [more]
C82A1_PEA9.258e-2234.84Cytochrome P450 82A1 (Fragment) OS=Pisum sativum G... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAN3BA08RM1 EHR Citrus clementina cDNA clone KN0AAN3BA08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876836 ID=FC876836; Name=FC876836; organism=Citrus clementina; type=EST; length=755bp
TTTTTTTTTTTTTTTTTTTTTTTTTTTTACATAATTTTGCAGTTGGCAAT
GACTGTTGAAATCAAACCGATATTAAAAAACTACAGCAAAACCACAAAAC
AGGATTATCAAATCTAAAATTTGGTCACGCAATGCCATGGCATGAAGTGA
TCTACAGTCTCTAAAGTACTGCTCTACAAATTCCAGTAAATTTTACAACC
TTTATTGAAAGTCACCTGCAAGGTCCCCTGCAGGCCCCGAAAATTTCCAG
CGGCAAGTTTACCCTAACTGGATCTGTTCAGCATTCCAATCATATTTTGC
CGCGGACTGCACATAGCCACCAAAGGCACGGTCTTAAATAGAGATAGTCC
ATAACTTGCAGTCATGTCCACCTCCGCCCCTATCTTTTCCCACTCGAAGC
ACTGTATGAGCGAACCCAAAGCAAAAGAAATTGTACGGATAGCCATGGCT
GCACCTGGGCAAGCTCTCCTCCCCATGCCAAATGGAATATGTTTGAATCC
CTCTCTTTCACTATGAATCCCTTCAAATCTTTCAGGTTTGAACTTGTTAG
GCTCCTCCCACACCTTGGAATCCCTATGCATTGCCCAGGCATTCACCATT
ATCGTCGTGCCTCGTGGTATGTGATATCCACCCACTATGCAGTTCTCAGA
AGAAAAATGTGGCAACAGAAGTGGTGCCGGAGGATATAATCGCAGCGTCT
CTTTTATGACACAGCAAAGGTATGGAAGGTTGACAAGATCCACGTCATTT
AACAT
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