FC876836
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC876836 vs. ExPASy Swiss-Prot
Match: CP2D1_RAT (Cytochrome P450 2D1 OS=Rattus norvegicus GN=Cyp2d1 PE=2 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 5.630e-11 Identity = 44/143 (30.77%), Postives = 70/143 (48.95%), Query Frame = -1 Query: 321 DLVNLPYLCCVIKETXXXXXXXXXXXPHFSSENCIVGGYHIPRGTTIMVNAWAMHRDSKVWEEPNKFKPERF---EGIHSEREGFKHIPFGMGRRACPGAAMAIRTISFALGSLIQCFEWEKIGAEVDMTASYGLSLFKTVPL 740 D ++PY VI E P F+S + V + IP+GTT+++N ++ +D VWE+P++F PE F +G + E F +PF GRRAC G +A + L+Q F + + +++G F PL Sbjct: 352 DQAHMPYTNAVIHEVQRFGDIAPLNLPRFTSCDIEVQDFVIPKGTTLIINLSSVLKDETVWEKPHRFHPEHFLDAQGNFVKHEAF--MPFSAGRRACLGEPLARMELFLFFTCLLQRFSF-SVPVGQPRPSTHGFFAFPVAPL 491
BLAST of FC876836 vs. ExPASy Swiss-Prot
Match: CP1B1_RAT (Cytochrome P450 1B1 OS=Rattus norvegicus GN=Cyp1b1 PE=1 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 5.630e-11 Identity = 42/139 (30.22%), Postives = 68/139 (48.92%), Query Frame = -1 Query: 339 DLVNLPYLCCVIKETXXXXXXXXXXXPHFSSENCIVGGYHIPRGTTIMVNAWAMHRDSKVWEEPNKFKPERF---EGIHSEREGFKHIPFGMGRRACPGAAMAIRTISFALGSLI--QCFEWEKIGAEVDMTASYGLSL 740 D NLPY+ + E+ PH ++ N V GY+IP+ T + VN W+++ D W P F P RF +G ++ + F +G+R C G ++ +T+ F S++ QC +M+ SYGLS+ Sbjct: 374 DQPNLPYVMAFLYESMRFTSFLPVTLPHATTANTFVLGYYIPKNTVVFVNQWSVNHDPAKWSNPEDFDPARFLDKDGFINKALASSVMIFSVGKRRCIGEELS-KTLLFLFISILAHQCNFKANQNEPSNMSFSYGLSI 511
BLAST of FC876836 vs. ExPASy Swiss-Prot
Match: CP3AT_PIG (Cytochrome P450 3A29 OS=Sus scrofa GN=CYP3A29 PE=2 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 7.352e-11 Identity = 35/118 (29.66%), Postives = 59/118 (50.00%), Query Frame = -1 Query: 387 LVNLPYLCCVIKETXXXXXXXXXXXPHFSSENCIVGGYHIPRGTTIMVNAWAMHRDSKVWEEPNKFKPERFEGIHSER-EGFKHIPFGMGRRACPGAAMAIRTISFALGSLIQCFEWE 737 L + YL V+ ET ++ + G +P+GT ++V + +HRD +W EP +F+PERF H + + ++PFG G R C G A+ + AL ++Q F ++ Sbjct: 350 LAQMEYLDMVVNETLRLYPIAARLE-RACKKDVEIHGVFVPKGTVVVVPVFVLHRDPDLWPEPEEFRPERFSKKHKDTINPYTYLPFGTGPRNCIGMRFALMNMKLALVRVLQNFSFK 466
BLAST of FC876836 vs. ExPASy Swiss-Prot
Match: CP3AS_BOVIN (Cytochrome P450 3A28 OS=Bos taurus GN=CYP3A28 PE=2 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 7.352e-11 Identity = 37/118 (31.36%), Postives = 61/118 (51.69%), Query Frame = -1 Query: 387 LVNLPYLCCVIKETXXXXXXXXXXXPHFSSENCIVGGYHIPRGTTIMVNAWAMHRDSKVWEEPNKFKPERFEGIHSER-EGFKHIPFGMGRRACPGAAMAIRTISFALGSLIQCFEWE 737 LV + YL V+ ET ++ + G IP+GTT++V + +H + ++W EP +F+PERF + + + ++PFG G R C G AI I AL ++Q F ++ Sbjct: 350 LVQMEYLDMVVNETLRMFPIAGRLE-RVCKKDVEIHGVTIPKGTTVLVPLFVLHNNPELWPEPEEFRPERFSKNNKDSINPYVYLPFGTGPRNCLGMRFAIMNIKLALVRILQNFSFK 466
BLAST of FC876836 vs. ExPASy Swiss-Prot
Match: CP3AL_CALJA (Cytochrome P450 3A21 OS=Callithrix jacchus GN=CYP3A21 PE=2 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 7.352e-11 Identity = 36/118 (30.51%), Postives = 59/118 (50.00%), Query Frame = -1 Query: 288 VGGYHIPRGTTIMVNAWAMHRDSKVWEEPNKFKPERFEGIHSER-EGFKHIPFGMGRRACPGAAMAIRTISFALGSLIQCFEWEKI-GAEVDMTASYGLSLFKTVPLVAMCSPRQNMI 635 + G IP+G +M+ ++A+H D K W EP KF PERF + + + + + PFG G R C G A+ + AL ++Q F ++ ++ + G L P+V PR + Sbjct: 383 INGVFIPKGVVVMIPSYALHYDPKYWTEPEKFLPERFSKNNKDNIDPYIYTPFGTGPRNCIGMRFALMNMKLALIRVLQNFSFKPCKETQIPLKLRLGGLLQTEKPIVLKVEPRDGTV 500
BLAST of FC876836 vs. ExPASy Swiss-Prot
Match: CP3AJ_CAPAE (Cytochrome P450 3A19 (Fragment) OS=Capra aegagrus GN=CYP3A19 PE=2 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 7.352e-11 Identity = 37/117 (31.62%), Postives = 59/117 (50.43%), Query Frame = -1 Query: 390 LVNLPYLCCVIKETXXXXXXXXXXXPHFSSENCIVGGYHIPRGTTIMVNAWAMHRDSKVWEEPNKFKPERFEGIHSER-EGFKHIPFGMGRRACPGAAMAIRTISFALGSLIQCFEW 737 LV + YL V+ ET ++ + G IP+GTT+MV + +H + + W EP +F+PERF + + + ++PFG G R C G A+ I AL ++Q F + Sbjct: 61 LVQMEYLDMVVNETLRMFPIAGRLE-RLCKKDVEIHGVSIPKGTTVMVPLFVLHNNPEFWPEPEEFRPERFSKKNKDGINPYVYLPFGTGPRNCVGMRFALMNIKLALVRILQNFSF 176
BLAST of FC876836 vs. ExPASy Swiss-Prot
Match: CP3A7_HUMAN (Cytochrome P450 3A7 OS=Homo sapiens GN=CYP3A7 PE=1 SV=2) HSP 1 Score: 67.781 bits (164), Expect = 7.352e-11 Identity = 40/152 (26.32%), Postives = 69/152 (45.39%), Query Frame = -1 Query: 288 LVNLPYLCCVIKETXXXXXXXXXXXPHFSSENCIVGGYHIPRGTTIMVNAWAMHRDSKVWEEPNKFKPERFEGIHSER-EGFKHIPFGMGRRACPGAAMAIRTISFALGSLIQCFEWEKI-GAEVDMTASYGLSLFKTVPLVAMCSPRQNMI 737 ++ L YL V+ ET ++ + G IP+G +M+ ++ +H D K W EP KF PERF + + + + + PFG G R C G A+ + AL ++Q F ++ ++ + +G L P+V R + Sbjct: 350 VLQLEYLDMVVNETLRLFPVAMRLE-RVCKKDVEINGMFIPKGVVVMIPSYVLHHDPKYWREPEKFLPERFSKKNKDNIDPYIYTPFGSGPRNCIGMRFALVNMKLALVRVLQNFSFKPCKETQIPLKLRFGGLLLTEKPIVLKAESRDETV 500
BLAST of FC876836 vs. ExPASy Swiss-Prot
Match: CP11A_DASAM (Cholesterol side-chain cleavage enzyme, mitochondrial (Fragment) OS=Dasyatis americana GN=CYP11A1 PE=2 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 7.352e-11 Identity = 40/145 (27.59%), Postives = 73/145 (50.34%), Query Frame = -1 Query: 303 LVNLPYLCCVIKETXXXXXXXXXXXPHFSSENCIVGGYHIPRGTTIMVNAWAMHRDSKVWEEPNKFKPERFEGIHSEREGFKHIPFGMGRRACPGAAMAIRTISFALGSLIQCFEWEKIGAEVDMTASYGLSLFKTVPLVAMCSP 737 L ++P L CV+KET + + E+ ++ YHIP GT + + +AM R+ K+++ P ++ PER+ + E F+H+ FG G R C G +A + + ++Q F+ E ++ + + L L P+ +P Sbjct: 372 LKSVPLLKCVVKETLRLYPVAISIQRYLN-EDTVLQNYHIPAGTLVQLGLYAMGRNPKIFKNPEQYNPERW--LKGEDTHFRHLGFGFGPRQCIGRRIAETQMVLLMIHMLQNFKIE-TDPMTEVKSKFSLILIPDKPINLKFTP 512
BLAST of FC876836 vs. ExPASy Swiss-Prot
Match: C516B_DICDI (Probable cytochrome P450 516B1 OS=Dictyostelium discoideum GN=cyp516b1 PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 7.352e-11 Identity = 45/150 (30.00%), Postives = 68/150 (45.33%), Query Frame = -1 Query: 381 MLNDVDLVNLP---------YLCCVIKETXXXXXXXXXXXPHFSSENCIVGGYHIPRGTTIMVNAWAMHRDSKVWEEPNKFKPERF----------------EGIHSEREGFKHIPFGMGRRACPGAAMAIRTISFALGSLIQCFEWEKI 755 ++N V NLP YL I+ET P +SE+ VGGY IP+GT +M++ + M D + W++P+ F PER+ G S+ E F IPFG+G R C G +A + + + F+W + Sbjct: 317 LINVVGKGNLPALVHRKDTSYLNACIQETMRIRTAAPLALPRIASEDIKVGGYTIPKGTQVMMSVYGMASDERYWKDPHIFNPERWLSSNHSTENGGGGGGVVGNSSQSEVF--IPFGVGPRMCVGMGVAKDELYYCASQMFMNFKWSPV 464
BLAST of FC876836 vs. ExPASy Swiss-Prot
Match: CP3AD_MOUSE (Cytochrome P450 3A13 OS=Mus musculus GN=Cyp3a13 PE=2 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 9.603e-11 Identity = 36/115 (31.30%), Postives = 58/115 (50.43%), Query Frame = -1 Query: 396 LVNLPYLCCVIKETXXXXXXXXXXXPHFSSENCIVGGYHIPRGTTIMVNAWAMHRDSKVWEEPNKFKPERFEGIHSER-EGFKHIPFGMGRRACPGAAMAIRTISFALGSLIQCF 737 L+ + YL V+ ET + + G IP+GT +M+ +A+H+D K W EP +F+PERF + + + ++PFG G R C G A+ + AL ++Q F Sbjct: 350 LLQMEYLDMVVNETLRLYPIAGRLE-RVCKTDVEINGLFIPKGTVVMIPTFALHKDPKYWPEPEEFRPERFSKKNQDSINPYMYLPFGSGPRNCIGMRFALINMKVALVRVLQNF 463 The following BLAST results are available for this feature:
BLAST of FC876836 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 242
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876836 ID=FC876836; Name=FC876836; organism=Citrus clementina; type=EST; length=755bpback to top |