FC876836

Overview
NameFC876836
Unique NameFC876836
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length755
Libraries
Library NameType
EHRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC876836 vs. ExPASy Swiss-Prot
Match: C76A2_SOLME (Cytochrome P450 76A2 OS=Solanum melongena GN=CYP76A2 PE=2 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 1.746e-20
Identity = 51/122 (41.80%), Postives = 73/122 (59.84%), Query Frame = -1
Query:  387 DVDLVNLPYLCCVIKETXXXXXXXXXXXPHFSSENCIVGGYHIPRGTTIMVNAWAMHRDSKVWEEPNKFKPERFEGIHSEREG--FKHIPFGMGRRACPGAAMAIRTISFALGSLIQCFEWE 746
            D D+ NLPY+  V+KE+           P  + ++    GY +P+ T ++VNAWA+ RD + W++P  FKPERF G   + +G  +  IPFG GRR C G  +  R + FALGSL++ FEWE
Sbjct:  351 DSDIENLPYMQAVLKESLRLHPPLPFLIPRETIQDTKFMGYDVPKDTQVLVNAWAIGRDPECWDDPMSFKPERFLGSKIDVKGQHYGLIPFGAGRRMCVGLPLGHRMMHFALGSLLREFEWE 472          
BLAST of FC876836 vs. ExPASy Swiss-Prot
Match: KO1_ARATH (Ent-kaurene oxidase OS=Arabidopsis thaliana GN=KO1 PE=1 SV=2)

HSP 1 Score: 98.9821 bits (245), Expect = 2.978e-20
Identity = 52/150 (34.67%), Postives = 79/150 (52.67%), Query Frame = -1
Query:  294 LVNLPYLCCVIKETXXXXXXXXXXXPHFSSENCIVGGYHIPRGTTIMVNAWAMHRDSKVWEEPNKFKPERF--EGIHSEREGFKHIPFGMGRRACPGAAMAIRTISFALGSLIQCFEWEKIGAEVDMTASYGLSLFKTVPLVAMCSPRQN 737
            L  +PYL  V  ET             ++ E+  +GGYH+P G+ I +N +  + D K WE P  + PERF  +G +   +  K + FG G+R C GA  A      A+G L+Q FEW+    E +   +YGL+  K  PL+A+ +PR++
Sbjct:  360 LSQVPYLNGVFHETLRKYSPAPLVPIRYAHEDTQIGGYHVPAGSEIAINIYGCNMDKKRWERPEDWWPERFLDDGKYETSDLHKTMAFGAGKRVCAGALQASLMAGIAIGRLVQEFEWKLRDGEEENVDTYGLTSQKLYPLMAIINPRRS 509          
BLAST of FC876836 vs. ExPASy Swiss-Prot
Match: C71A1_PERAE (Cytochrome P450 71A1 OS=Persea americana GN=CYP71A1 PE=1 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 2.978e-20
Identity = 50/127 (39.37%), Postives = 70/127 (55.12%), Query Frame = -1
Query:  378 LNDVDLVNLPYLCCVIKETXXXXXXXXXXXPHFSSENCIVGGYHIPRGTTIMVNAWAMHRDSKVWEEPNKFKPERF--EGIHSEREGFKHIPFGMGRRACPGAAMAIRTISFALGSLIQCFEWEKIG 752
            + + DL  L YL  +IKET           P  S+ + ++ GYHIP  T + +NAWA+ RD K WE   +F PERF    +  + + F+ IPFG GRR CPG A  I ++  +L +L+  F WE  G
Sbjct:  344 VEEEDLHQLHYLKLIIKETLRLHPVAPLLVPRESTRDVVIRGYHIPAKTRVFINAWAIGRDPKSWENAEEFLPERFVNNSVDFKGQDFQLIPFGAGRRGCPGIAFGISSVEISLANLLYWFNWELPG 470          
BLAST of FC876836 vs. ExPASy Swiss-Prot
Match: C71A2_SOLME (Cytochrome P450 71A2 OS=Solanum melongena GN=CYP71A2 PE=2 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 3.890e-20
Identity = 58/158 (36.71%), Postives = 88/158 (55.70%), Query Frame = -1
Query:  303 LNDVDLVNLPYLCCVIKETXXXXXXXXXXXPHFSSENCI--VGGYHIPRGTTIMVNAWAMHRDSKVWEEPNKFKPERFEGIHSEREG--FKHIPFGMGRRACPGAAMAIRTISFALGSLIQCFEW---EKIGAE-VDMTASYGLSLFKTVPLVAMCSP 752
            + + DL N+ YL  VIKE+               S   +  +G YHIP  T  ++NAWA+ RD   WE P +++PERF    ++ +G  FK +PFG GRR CPG++ AI  I  AL  L+  F++   E I  E +DMT + G++  + +PL+ + +P
Sbjct:  347 ITEDDLKNMQYLRAVIKESLRLHPTQESLLVPRESMEDVNLLGYYHIPARTQAIINAWAIGRDPLSWENPEEYQPERFLNSDADVKGLNFKLLPFGAGRRGCPGSSFAIAVIELALARLVHKFDFALPEGIKPEDLDMTETIGITTRRKLPLLVVATP 504          
BLAST of FC876836 vs. ExPASy Swiss-Prot
Match: TCMO_PEA (Trans-cinnamate 4-monooxygenase OS=Pisum sativum GN=CYP73A9 PE=2 SV=2)

HSP 1 Score: 97.8265 bits (242), Expect = 6.635e-20
Identity = 49/124 (39.52%), Postives = 74/124 (59.68%), Query Frame = -1
Query:  393 LNDVDLVNLPYLCCVIKETXXXXXXXXXXXPHFSSENCIVGGYHIPRGTTIMVNAWAMHRDSKVWEEPNKFKPERF--EGIHSEREG--FKHIPFGMGRRACPGAAMAIRTISFALGSLIQCFE 752
            + + DL  LPYL  VIKET           PH +  +  +GG+ IP  + I+VNAW +  +  +W++P +F+PERF  E  H E  G  F+++PFG+GRR+CPG  +A+  +   +G L+Q FE
Sbjct:  346 VTEPDLEKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGFDIPAESKILVNAWWLANNPALWKKPEEFRPERFLEEEAHVEANGNDFRYLPFGVGRRSCPGIILALPILGITIGRLVQNFE 469          
BLAST of FC876836 vs. ExPASy Swiss-Prot
Match: C71BE_ARATH (Cytochrome P450 71B14 OS=Arabidopsis thaliana GN=CYP71B14 PE=2 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 8.665e-20
Identity = 60/152 (39.47%), Postives = 83/152 (54.61%), Query Frame = -1
Query:  321 LNDVDLVNLPYLCCVIKETXXXXXXXXXXXPHFSSENCIVGGYHIPRGTTIMVNAWAMHRDSKVWEEPNKFKPERFEGIHSERE----GFKHIPFGMGRRACPGAAMAIRTISFALGSLIQCFEW---EKIGAE-VDMTASYGLSLFKTVPL 752
            + + D+  L YL  VIKET           P  +S+   +GGY IP+ T I VN WA+ R+  VW++P  F PERF  +HSE +     F+ +PFG GRR CPG  + +  +   L +L+  F+W   E +  E VD+  SYGL   K VPL
Sbjct:  337 ITEEDIERLEYLKMVIKETLRINPLVPLLIPREASKYIKIGGYDIPKKTWIYVNIWAVQRNPNVWKDPEVFIPERF--MHSEIDYKGVDFELLPFGSGRRMCPGMGLGMALVHLTLINLLYRFDWKLPEGMNIEDVDLEESYGLVCPKKVPL 486          
BLAST of FC876836 vs. ExPASy Swiss-Prot
Match: C71AL_ARATH (Cytochrome P450 71A21 OS=Arabidopsis thaliana GN=CYP71A21 PE=2 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 8.665e-20
Identity = 52/156 (33.33%), Postives = 84/156 (53.85%), Query Frame = -1
Query:  306 LNDVDLVNLPYLCCVIKETXXXXXXXXXXXPHFSSENCIVGGYHIPRGTTIMVNAWAMHRDSKVW-EEPNKFKPERF--EGIHSEREGFKHIPFGMGRRACPGAAMAIRTISFALGSLIQCFEW----EKIGAEVDMTASYGLSLFKTVPLVAMCS 752
            +++ D+ N+ YL  VIKET           PH S ++ I+G YHIP GT +M+NAWA+ R++  W  +  KF+PER     +      F+ +PFG GRR CP  + A+  I  AL + +  ++W    +    + ++  S G+ + +  PL A+ S
Sbjct:  332 VSEEDIQNMSYLKAVIKETTRLHPPLPLLAPHESIQDVILGDYHIPAGTQVMINAWAIGREAATWGPDAEKFRPERHLDSSVDFRGHNFELVPFGAGRRICPAISFAVVLIEVALANFVHRYDWKLPEDSKENQTNVAESTGMVIHRLFPLYAIAS 487          
BLAST of FC876836 vs. ExPASy Swiss-Prot
Match: TCMO_PHAAU (Trans-cinnamate 4-monooxygenase OS=Phaseolus aureus GN=CYP73A2 PE=1 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.132e-19
Identity = 49/124 (39.52%), Postives = 73/124 (58.87%), Query Frame = -1
Query:  393 LNDVDLVNLPYLCCVIKETXXXXXXXXXXXPHFSSENCIVGGYHIPRGTTIMVNAWAMHRDSKVWEEPNKFKPERF--EGIHSEREG--FKHIPFGMGRRACPGAAMAIRTISFALGSLIQCFE 752
            + + D+  LPYL  V+KET           PH +  +  +GGY IP  + I+VNAW +  +   W++P +F+PERF  E  H E  G  F+++PFG+GRR+CPG  +A+  +   LG L+Q FE
Sbjct:  346 VTEPDIQKLPYLQAVVKETLRLRMAIPLLVPHMNLHDAKLGGYDIPAESKILVNAWWLANNPAHWKKPEEFRPERFFEEESHVEANGNDFRYLPFGVGRRSCPGIILALPILGITLGRLVQNFE 469          
BLAST of FC876836 vs. ExPASy Swiss-Prot
Match: TCMO_GLYEC (Trans-cinnamate 4-monooxygenase OS=Glycyrrhiza echinata GN=CYP73A14 PE=2 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.132e-19
Identity = 50/124 (40.32%), Postives = 72/124 (58.06%), Query Frame = -1
Query:  393 LNDVDLVNLPYLCCVIKETXXXXXXXXXXXPHFSSENCIVGGYHIPRGTTIMVNAWAMHRDSKVWEEPNKFKPERF--EGIHSEREG--FKHIPFGMGRRACPGAAMAIRTISFALGSLIQCFE 752
            + + D+  LPYL  VIKET           PH +  +  +GGY IP  + I+VNAW +  +   W+ P +F+PERF  E  H E  G  F+++PFG+GRR+CPG  +A+  +   LG L+Q FE
Sbjct:  346 VTEPDMQKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDIPAESKILVNAWWLANNPANWKRPEEFRPERFLEEESHVEANGNDFRYLPFGVGRRSCPGIILALPILGITLGRLVQNFE 469          
BLAST of FC876836 vs. ExPASy Swiss-Prot
Match: C71DI_MENSP (Cytochrome P450 71D18 OS=Mentha spicata GN=CYP71D18 PE=1 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.132e-19
Identity = 53/139 (38.13%), Postives = 74/139 (53.24%), Query Frame = -1
Query:  342 DLVNLPYLCCVIKETXXXXXXXXXXXPHFSSENCIVGGYHIPRGTTIMVNAWAMHRDSKVWEEPNKFKPERFEGIHSEREG--FKHIPFGMGRRACPGAAMAIRTISFALGSLIQCFEWE----KIGAEVDMTASYGLS 740
            ++  L YL  V+KET              S E C V GY IP  T I +N WA+ RD + WE+P+ F+PERF+ +  +  G  F+ IPFG GRR CPG    +  +   L  L+  F+W+       A++DMT + GLS
Sbjct:  342 EVQELKYLRSVLKETLRLHPPFPLIPRQ-SREECEVNGYTIPAKTRIFINVWAIGRDPQYWEDPDTFRPERFDEVSRDFMGNDFEFIPFGAGRRICPGLHFGLANVEIPLAQLLYHFDWKLPQGMTDADLDMTETPGLS 479          
The following BLAST results are available for this feature:
BLAST of FC876836 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 242
Match NameE-valueIdentityDescription
C76A2_SOLME1.746e-2041.80Cytochrome P450 76A2 OS=Solanum melongena GN=CYP76... [more]
KO1_ARATH2.978e-2034.67Ent-kaurene oxidase OS=Arabidopsis thaliana GN=KO1... [more]
C71A1_PERAE2.978e-2039.37Cytochrome P450 71A1 OS=Persea americana GN=CYP71A... [more]
C71A2_SOLME3.890e-2036.71Cytochrome P450 71A2 OS=Solanum melongena GN=CYP71... [more]
TCMO_PEA6.635e-2039.52Trans-cinnamate 4-monooxygenase OS=Pisum sativum G... [more]
C71BE_ARATH8.665e-2039.47Cytochrome P450 71B14 OS=Arabidopsis thaliana GN=C... [more]
C71AL_ARATH8.665e-2033.33Cytochrome P450 71A21 OS=Arabidopsis thaliana GN=C... [more]
TCMO_PHAAU1.132e-1939.52Trans-cinnamate 4-monooxygenase OS=Phaseolus aureu... [more]
TCMO_GLYEC1.132e-1940.32Trans-cinnamate 4-monooxygenase OS=Glycyrrhiza ech... [more]
C71DI_MENSP1.132e-1938.13Cytochrome P450 71D18 OS=Mentha spicata GN=CYP71D1... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAN3BA08RM1 EHR Citrus clementina cDNA clone KN0AAN3BA08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876836 ID=FC876836; Name=FC876836; organism=Citrus clementina; type=EST; length=755bp
TTTTTTTTTTTTTTTTTTTTTTTTTTTTACATAATTTTGCAGTTGGCAAT
GACTGTTGAAATCAAACCGATATTAAAAAACTACAGCAAAACCACAAAAC
AGGATTATCAAATCTAAAATTTGGTCACGCAATGCCATGGCATGAAGTGA
TCTACAGTCTCTAAAGTACTGCTCTACAAATTCCAGTAAATTTTACAACC
TTTATTGAAAGTCACCTGCAAGGTCCCCTGCAGGCCCCGAAAATTTCCAG
CGGCAAGTTTACCCTAACTGGATCTGTTCAGCATTCCAATCATATTTTGC
CGCGGACTGCACATAGCCACCAAAGGCACGGTCTTAAATAGAGATAGTCC
ATAACTTGCAGTCATGTCCACCTCCGCCCCTATCTTTTCCCACTCGAAGC
ACTGTATGAGCGAACCCAAAGCAAAAGAAATTGTACGGATAGCCATGGCT
GCACCTGGGCAAGCTCTCCTCCCCATGCCAAATGGAATATGTTTGAATCC
CTCTCTTTCACTATGAATCCCTTCAAATCTTTCAGGTTTGAACTTGTTAG
GCTCCTCCCACACCTTGGAATCCCTATGCATTGCCCAGGCATTCACCATT
ATCGTCGTGCCTCGTGGTATGTGATATCCACCCACTATGCAGTTCTCAGA
AGAAAAATGTGGCAACAGAAGTGGTGCCGGAGGATATAATCGCAGCGTCT
CTTTTATGACACAGCAAAGGTATGGAAGGTTGACAAGATCCACGTCATTT
AACAT
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