FC876836

Overview
NameFC876836
Unique NameFC876836
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length755
Libraries
Library NameType
EHRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC876836 vs. ExPASy Swiss-Prot
Match: C71DI_MENGR (Cytochrome P450 71D18 OS=Mentha gracilis GN=CYP71D18 PE=1 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.132e-19
Identity = 53/139 (38.13%), Postives = 74/139 (53.24%), Query Frame = -1
Query:  342 DLVNLPYLCCVIKETXXXXXXXXXXXPHFSSENCIVGGYHIPRGTTIMVNAWAMHRDSKVWEEPNKFKPERFEGIHSEREG--FKHIPFGMGRRACPGAAMAIRTISFALGSLIQCFEWE----KIGAEVDMTASYGLS 740
            ++  L YL  V+KET              S E C V GY IP  T I +N WA+ RD + WE+P+ F+PERF+ +  +  G  F+ IPFG GRR CPG    +  +   L  L+  F+W+       A++DMT + GLS
Sbjct:  342 EVQELKYLRSVLKETLRLHPPFPLIPRQ-SREECEVNGYTIPAKTRIFINVWAIGRDPQYWEDPDTFRPERFDEVSRDFMGNDFEFIPFGAGRRICPGLHFGLANVEIPLAQLLYHFDWKLPQGMTDADLDMTETPGLS 479          
BLAST of FC876836 vs. ExPASy Swiss-Prot
Match: C71A6_NEPRA (Cytochrome P450 71A6 (Fragment) OS=Nepeta racemosa GN=CYP71A6 PE=2 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.132e-19
Identity = 55/156 (35.26%), Postives = 82/156 (52.56%), Query Frame = -1
Query:  303 LNDVDLVNLPYLCCVIKETXXXXXXXXXXXPHFSSENCIVGGYHIPRGTTIMVNAWAMHRDSKVWEEPNKFKPERFEGIHSEREG--FKHIPFGMGRRACPGAAMAIRTISFALGSLIQCFEWEKIGA----EVDMTASYGLSLFKTVPLVAMCSP 752
            + + DL  +PYL  V+KE+           P  S+ +  V GY +  GT +++N WA+ RDS VWEE   F PERF     +  G  F+ IPFG GRR CPGA  A      AL +L+  F+++        ++DM+   G ++ K  PL+ + +P
Sbjct:  351 IEESDLEKMPYLKAVMKESLRLHAPVPLLVPRESTRDTKVLGYDVASGTRVLINCWAIGRDSSVWEESETFLPERFLETSIDYRGMHFELIPFGSGRRGCPGATFAAAIDELALATLVHKFDFKLPNGVRVEDLDMSEGSGFTIHKKFPLLVVPTP 506          
BLAST of FC876836 vs. ExPASy Swiss-Prot
Match: C89A2_ARATH (Cytochrome P450 89A2 OS=Arabidopsis thaliana GN=CYP89A2 PE=2 SV=2)

HSP 1 Score: 96.2857 bits (238), Expect = 1.930e-19
Identity = 52/158 (32.91%), Postives = 84/158 (53.16%), Query Frame = -1
Query:  297 LNDVDLVNLPYLCCVIKETXXXXXXXXXXXPHFSSENCIVGGYHIPRGTTIMVNAWAMHRDSKVWEEPNKFKPERFEGIH-----SEREGFKHIPFGMGRRACPGAAMAIRTISFALGSLIQCFEWEKI-GAEVDMTASYGLSLFKTVPLVAMCSPRQ 752
            + + D+  +PYL  V+ E            PH  +E+ ++GGY +P+  TI      + RD   WEEP  FKPERF G       +   G K +PFG GRR CPG  +A+  + + + ++++ F+W+++ G EVD+T     ++    PL A+  PR+
Sbjct:  347 VEEEDVEKMPYLKAVVLEGLRRHPPGHFLLPHSVTEDTVLGGYKVPKNGTINFMVAEIGRDPVEWEEPMAFKPERFMGEEEAVDLTGSRGIKMMPFGAGRRICPGIGLAMLHLEYYVANMVREFQWKEVQGHEVDLTEKLEFTVVMKHPLKALAVPRR 504          
BLAST of FC876836 vs. ExPASy Swiss-Prot
Match: C71BP_ARATH (Cytochrome P450 71B25 OS=Arabidopsis thaliana GN=CYP71B25 PE=2 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.930e-19
Identity = 55/148 (37.16%), Postives = 83/148 (56.08%), Query Frame = -1
Query:  321 LNDVDLVNLPYLCCVIKETXXXXXXXXXXXPHFSSENCIVGGYHIPRGTTIMVNAWAMHRDSKVWEEPNKFKPERFEGIHSEREG--FKHIPFGMGRRACPGAAMAIRTISFALGSLIQCFEWE--KIGAEVDMTASYGLSLFKTVPL 752
            + + D+  L YL  VIKET           P  +  +  + GY IPR T ++V+AW++ RD K W+ P +F PERF     + +G  F+ +PFG GRR CPG A AI TI   L +L+  F+W+  +   +++M  S  +++ K VPL
Sbjct:  346 IEEEDVGKLQYLKLVIKETLRLHPAAPLLLPRETMADIKIQGYDIPRKTLLLVSAWSLGRDPKYWKNPEEFNPERFIDCPVDYKGHSFEFLPFGSGRRFCPGMASAIATIELTLLNLLYFFDWKLPEEMKDMNMEESGDVTIVKKVPL 493          
BLAST of FC876836 vs. ExPASy Swiss-Prot
Match: C71AM_ARATH (Cytochrome P450 71A22 OS=Arabidopsis thaliana GN=CYP71A22 PE=2 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.930e-19
Identity = 53/156 (33.97%), Postives = 85/156 (54.49%), Query Frame = -1
Query:  306 LNDVDLVNLPYLCCVIKETXXXXXXXXXXXPHFSSENCIVGGYHIPRGTTIMVNAWAMHRDSKVW-EEPNKFKPERF--EGIHSEREGFKHIPFGMGRRACPGAAMAIRTISFALGSLIQCFEW----EKIGAEVDMTASYGLSLFKTVPLVAMCS 752
            +++ D+ ++ YL  VIKET           PH S+++  +G YHIP GT +M+NAWA+ R++  W  +  KF+PER     +      F+ IPFG GRR CP  + A+  I   L +L+  ++W    E I  + ++  S G+ + +  PL A+ S
Sbjct:  332 VSEDDIKDMNYLKAVIKETMRLHPPLPLMVPHESTQDVRLGDYHIPAGTQVMINAWAIGREAATWGPDAEKFRPERHLNSSVDFRGHNFELIPFGAGRRICPAISFAVILIEVTLANLVHRYDWRLPEEYIEDQTNVAESTGMVIHRLFPLYAIVS 487          
BLAST of FC876836 vs. ExPASy Swiss-Prot
Match: C71A9_SOYBN (Cytochrome P450 71A9 OS=Glycine max GN=CYP71A9 PE=2 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.930e-19
Identity = 54/157 (34.39%), Postives = 85/157 (54.14%), Query Frame = -1
Query:  303 MLNDVDLVNLPYLCCVIKETXXXXXXXXXXXPHFSSENCIVGGYHIPRGTTIMVNAWAMHRDSKVWEEPNKFKPERF--EGIHSEREGFKHIPFGMGRRACPGAAMAIRTISFALGSLIQCFEWE-KIG---AEVDMTASYGLSLFKTVPLVAMCSP 755
            M+ ++DL  L Y+  V+KE            P   +ENC + G+ IP  T ++VNA ++  D   WE PN+F PERF    I  + + F+ +PFG+GRR CPG   A+  +  AL +L+  F+WE  +G    ++DM  + G+++ K   L    +P
Sbjct:  340 MVEEIDLSKLLYIKSVVKEVLRLHPPAPLLVPREITENCTIKGFEIPAKTRVLVNAKSIAMDPCCWENPNEFLPERFLVSPIDFKGQHFEMLPFGVGRRGCPGVNFAMPVVELALANLLFRFDWELPLGLGIQDLDMEEAIGITIHKKAHLWLKATP 496          
BLAST of FC876836 vs. ExPASy Swiss-Prot
Match: C82A2_SOYBN (Cytochrome P450 82A2 OS=Glycine max GN=CYP82A2 PE=2 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 2.521e-19
Identity = 54/152 (35.53%), Postives = 77/152 (50.66%), Query Frame = -1
Query:  300 DLVNLPYLCCVIKETXXXXXXXXXXXPHFSSENCIVGGYHIPRGTTIMVNAWAMHRDSKVWEEPNKFKPERF----EGIHSEREGFKHIPFGMGRRACPGAAMAIRTISFALGSLIQCFEWEKIGAE-VDMTASYGLSLFKTVPLVAMCSPR 740
            DL  L YL  V+KET           P    E+C +GGY + +GT ++ N   +H D  VW  P +FKPERF    + I  + + F+ +PFG GRR CPG  + ++T+   L S +  FE      E +DMT  +  +  K  PL  +  PR
Sbjct:  362 DLSKLTYLQAVVKETLRLYPPAPLSRPREFEEDCTIGGYTVKKGTRLITNLSKIHTDHNVWSNPLEFKPERFLTTDKDIDMKGQHFQLLPFGGGRRICPGINLGLQTVRLTLASFLHSFEILNPSTEPLDMTEVFRATNTKATPLEILIKPR 513          
BLAST of FC876836 vs. ExPASy Swiss-Prot
Match: C99A2_ORYSJ (Cytochrome P450 99A2 OS=Oryza sativa subsp. japonica GN=CYP99A2 PE=2 SV=2)

HSP 1 Score: 95.5153 bits (236), Expect = 3.293e-19
Identity = 44/116 (37.93%), Postives = 66/116 (56.90%), Query Frame = -1
Query:  390 NLPYLCCVIKETXXXXXXXXXXXPHFSSENCIVGGYHIPRGTTIMVNAWAMHRDSKVWEEPNKFKPERFEGIHSEREG--FKHIPFGMGRRACPGAAMAIRTISFALGSLIQCFEW 731
            NL Y+  VIKET           PH   E C +GGY +  GT +++N+WAM R  + W++  +FKPERFE   ++ +G  F+++PFG GRR CPG    +  +   +  L+  F+W
Sbjct:  376 NLRYMKMVIKETMRLNPVLPLLMPHLCRETCDIGGYEVVEGTRVVINSWAMARSPEYWDDAEEFKPERFEDGMADYKGSRFEYLPFGTGRRRCPGDTFGMVLLELIVARLLYYFDW 491          
BLAST of FC876836 vs. ExPASy Swiss-Prot
Match: C71D7_SOLCH (Cytochrome P450 71D7 OS=Solanum chacoense GN=CYP71D7 PE=3 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 3.293e-19
Identity = 56/154 (36.36%), Postives = 78/154 (50.65%), Query Frame = -1
Query:  297 DLVNLPYLCCVIKETXXXXXXXXXXXPHFSSENCIVGGYHIPRGTTIMVNAWAMHRDSKVWEEPNKFKPERFE--GIHSEREGFKHIPFGMGRRACPGAAMAIRTISFALGSLIQCFEWE-KIGAE---VDMTASYGLSLFKTVPLVAMCSPRQ 740
            D+  L YL  VIKET           P    E   + GY IP  T +MVN WA+ RD K W++   FKPERFE   I      F+++PFG GRR CPG +  +  +   L  L+  F+W+   G E   +D+T S G++  +   L  + +P Q
Sbjct:  346 DVEELKYLKLVIKETMRLHAPVPLLVPRECREETEINGYTIPVKTKVMVNVWALGRDPKYWDDAESFKPERFEQCSIDFIGNNFEYLPFGGGRRICPGISFGLANVYLPLAQLLYHFDWKLPTGMEPKDLDLTESAGITAARKGDLYLIATPHQ 499          
BLAST of FC876836 vs. ExPASy Swiss-Prot
Match: C71C4_MAIZE (Cytochrome P450 71C4 OS=Zea mays GN=CYP71C4 PE=2 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 3.293e-19
Identity = 56/156 (35.90%), Postives = 81/156 (51.92%), Query Frame = -1
Query:  318 MLNDVDLVNLPYLCCVIKETXXXXXXXXXXXPHFSSENCIVGGYHIPRGTTIMVNAWAMHRDSKVWEEPNKFKPERF------EGIHSEREGFKHIPFGMGRRACPGAAMAIRTISFALGSLIQCFEWE----KIGAEVDMTASYGLSLFKTVPLV 755
            M+ + +L  +  L  VIKET           PH+S + C V GY IP  T ++VNAWA+ R S  WE  N+F PERF       G+  +   F+ + FG GRR CPG   A  TI   L +L+  F+W+        +VDMT  +G+++ +   L+
Sbjct:  377 MVTEDNLPGMTDLKAVIKETLRLHPPVPLLLPHYSLDACEVAGYTIPANTRVVVNAWALGRHSGYWERENEFVPERFLSGDVAGGVDLKPNEFQFLAFGSGRRMCPGVHSASATIEAMLSNLMYRFDWQLPAGMKAEDVDMTEVFGITVSRKEKLL 532          
The following BLAST results are available for this feature:
BLAST of FC876836 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 242
Match NameE-valueIdentityDescription
C71DI_MENGR1.132e-1938.13Cytochrome P450 71D18 OS=Mentha gracilis GN=CYP71D... [more]
C71A6_NEPRA1.132e-1935.26Cytochrome P450 71A6 (Fragment) OS=Nepeta racemosa... [more]
C89A2_ARATH1.930e-1932.91Cytochrome P450 89A2 OS=Arabidopsis thaliana GN=CY... [more]
C71BP_ARATH1.930e-1937.16Cytochrome P450 71B25 OS=Arabidopsis thaliana GN=C... [more]
C71AM_ARATH1.930e-1933.97Cytochrome P450 71A22 OS=Arabidopsis thaliana GN=C... [more]
C71A9_SOYBN1.930e-1934.39Cytochrome P450 71A9 OS=Glycine max GN=CYP71A9 PE=... [more]
C82A2_SOYBN2.521e-1935.53Cytochrome P450 82A2 OS=Glycine max GN=CYP82A2 PE=... [more]
C99A2_ORYSJ3.293e-1937.93Cytochrome P450 99A2 OS=Oryza sativa subsp. japoni... [more]
C71D7_SOLCH3.293e-1936.36Cytochrome P450 71D7 OS=Solanum chacoense GN=CYP71... [more]
C71C4_MAIZE3.293e-1935.90Cytochrome P450 71C4 OS=Zea mays GN=CYP71C4 PE=2 S... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAN3BA08RM1 EHR Citrus clementina cDNA clone KN0AAN3BA08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876836 ID=FC876836; Name=FC876836; organism=Citrus clementina; type=EST; length=755bp
TTTTTTTTTTTTTTTTTTTTTTTTTTTTACATAATTTTGCAGTTGGCAAT
GACTGTTGAAATCAAACCGATATTAAAAAACTACAGCAAAACCACAAAAC
AGGATTATCAAATCTAAAATTTGGTCACGCAATGCCATGGCATGAAGTGA
TCTACAGTCTCTAAAGTACTGCTCTACAAATTCCAGTAAATTTTACAACC
TTTATTGAAAGTCACCTGCAAGGTCCCCTGCAGGCCCCGAAAATTTCCAG
CGGCAAGTTTACCCTAACTGGATCTGTTCAGCATTCCAATCATATTTTGC
CGCGGACTGCACATAGCCACCAAAGGCACGGTCTTAAATAGAGATAGTCC
ATAACTTGCAGTCATGTCCACCTCCGCCCCTATCTTTTCCCACTCGAAGC
ACTGTATGAGCGAACCCAAAGCAAAAGAAATTGTACGGATAGCCATGGCT
GCACCTGGGCAAGCTCTCCTCCCCATGCCAAATGGAATATGTTTGAATCC
CTCTCTTTCACTATGAATCCCTTCAAATCTTTCAGGTTTGAACTTGTTAG
GCTCCTCCCACACCTTGGAATCCCTATGCATTGCCCAGGCATTCACCATT
ATCGTCGTGCCTCGTGGTATGTGATATCCACCCACTATGCAGTTCTCAGA
AGAAAAATGTGGCAACAGAAGTGGTGCCGGAGGATATAATCGCAGCGTCT
CTTTTATGACACAGCAAAGGTATGGAAGGTTGACAAGATCCACGTCATTT
AACAT
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