FC876836

Overview
NameFC876836
Unique NameFC876836
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length755
Libraries
Library NameType
EHRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC876836 vs. ExPASy Swiss-Prot
Match: C71B3_ARATH (Cytochrome P450 71B3 OS=Arabidopsis thaliana GN=CYP71B3 PE=2 SV=2)

HSP 1 Score: 95.5153 bits (236), Expect = 3.293e-19
Identity = 52/148 (35.14%), Postives = 81/148 (54.73%), Query Frame = -1
Query:  321 LNDVDLVNLPYLCCVIKETXXXXXXXXXXXPHFSSENCIVGGYHIPRGTTIMVNAWAMHRDSKVWEEPNKFKPERFEGIHSEREG--FKHIPFGMGRRACPGAAMAIRTISFALGSLIQCFEWE--KIGAEVDMTASYGLSLFKTVPL 752
            + + D+  L YL  VIKET           P  +  +  + GY IPR T ++VNAW++ R+ ++WE P +F PERF     + +G  F+ +PFG GR+ CPG A  I T+   L +L+  F+W   +   ++DM  +   ++ K VPL
Sbjct:  346 IEEEDVDKLQYLKLVIKETLRLHPPAPLLLPRETMADIKIQGYDIPRKTILLVNAWSIGRNPELWENPEEFNPERFIDCPMDYKGNSFEMLPFGSGRKICPGIAFGIATVELGLLNLLYYFDWRLAEEDKDIDMEEAGDATIVKKVPL 493          
BLAST of FC876836 vs. ExPASy Swiss-Prot
Match: C71DC_CATRO (Tabersonine 16-hydroxylase (Fragment) OS=Catharanthus roseus GN=CYP71D12 PE=1 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 4.300e-19
Identity = 50/140 (35.71%), Postives = 74/140 (52.86%), Query Frame = -1
Query:  339 LNDVDLVNLPYLCCVIKETXXXXXXXXXXXPHFSSENCIVGGYHIPRGTTIMVNAWAMHRDSKVWEEPNKFKPERF--EGIHSEREGFKHIPFGMGRRACPGAAMAIRTISFALGSLIQCFEWEKIGAEVDMTASYGLSL 752
            +++  L  L YL  VIKET           P    E C + GY IP  + ++VNAWA+ RD   W EP KF P+RF    +  +   F+++PFG GRR CPG   A+  I   L  L+  F+W+    +++M  S G+++
Sbjct:  337 VDETKLHQLKYLQAVIKETLRLHPPVPLLLPRECREQCKIKGYTIPSKSRVIVNAWAIGRDPNYWIEPEKFNPDRFLESKVDFKGNSFEYLPFGGGRRICPGITFALANIELPLAQLLFHFDWQSNTEKLNMKESRGVTV 476          
BLAST of FC876836 vs. ExPASy Swiss-Prot
Match: C71B4_ARATH (Cytochrome P450 71B4 OS=Arabidopsis thaliana GN=CYP71B4 PE=2 SV=2)

HSP 1 Score: 95.1301 bits (235), Expect = 4.300e-19
Identity = 55/144 (38.19%), Postives = 80/144 (55.56%), Query Frame = -1
Query:  321 DLVNLPYLCCVIKETXXXXXXXXXXXPHFSSENCIVGGYHIPRGTTIMVNAWAMHRDSKVWEEPNKFKPERFEGIHSEREG--FKHIPFGMGRRACPGAAMAIRTISFALGSLIQCFEWE--KIGAEVDMTASYGLSLFKTVPL 740
            DL  L YL  V+KET           P  +  +  + GY IP+   ++VNAW++ RD + W+ P +F PERF     + +G  F+ +PFG GRR CPG AMAI TI   L +L+  F+W   +   ++DM  +  L++ K VPL
Sbjct:  351 DLDKLQYLKLVVKETLRLHPAAPLLLPRETMADIKIQGYDIPQKRALLVNAWSIGRDPESWKNPEEFNPERFIDCPVDYKGHSFELLPFGSGRRICPGIAMAIATIELGLLNLLYFFDWNMPEKKKDMDMEEAGDLTVDKKVPL 494          
BLAST of FC876836 vs. ExPASy Swiss-Prot
Match: TCMO_ZINEL (Trans-cinnamate 4-monooxygenase OS=Zinnia elegans GN=CYP73A12 PE=2 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 5.617e-19
Identity = 46/124 (37.10%), Postives = 71/124 (57.26%), Query Frame = -1
Query:  393 LNDVDLVNLPYLCCVIKETXXXXXXXXXXXPHFSSENCIVGGYHIPRGTTIMVNAWAMHRDSKVWEEPNKFKPERF----EGIHSEREGFKHIPFGMGRRACPGAAMAIRTISFALGSLIQCFE 752
            + + DL  LPYL  VIKET           PH +  +  +GGY IP  + I+VNAW +  +   W++P +F+PERF      + +    F+++PFG+GRR+CPG  +A+  +   +G L+Q FE
Sbjct:  346 VTEPDLHKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDIPAESKILVNAWWLANNPDQWKKPEEFRPERFLEEESKVEANGNDFRYLPFGVGRRSCPGIILALPILGITIGRLVQNFE 469          
BLAST of FC876836 vs. ExPASy Swiss-Prot
Match: TCMO_POPKI (Trans-cinnamate 4-monooxygenase OS=Populus kitakamiensis GN=CYP73A16 PE=2 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 5.617e-19
Identity = 48/124 (38.71%), Postives = 71/124 (57.26%), Query Frame = -1
Query:  393 LNDVDLVNLPYLCCVIKETXXXXXXXXXXXPHFSSENCIVGGYHIPRGTTIMVNAWAMHRDSKVWEEPNKFKPERF--EGIHSEREG--FKHIPFGMGRRACPGAAMAIRTISFALGSLIQCFE 752
            + + D   LPYL  V+KET           PH +  +  +GG+ IP  + I+VNAW +  +   W+ P +F+PERF  EG   E  G  F+++PFG+GRR+CPG  +A+  +   LG L+Q FE
Sbjct:  346 ITEPDTYKLPYLNAVVKETLRLRMAIPLLVPHMNLHDAKLGGFDIPAESKILVNAWWLANNPAHWKNPEEFRPERFLEEGAKVEANGNDFRYLPFGVGRRSCPGIILALPILGITLGRLVQNFE 469          
BLAST of FC876836 vs. ExPASy Swiss-Prot
Match: TCMO_CICAR (Trans-cinnamate 4-monooxygenase OS=Cicer arietinum GN=CYP73A19 PE=2 SV=2)

HSP 1 Score: 94.7449 bits (234), Expect = 5.617e-19
Identity = 49/124 (39.52%), Postives = 72/124 (58.06%), Query Frame = -1
Query:  393 LNDVDLVNLPYLCCVIKETXXXXXXXXXXXPHFSSENCIVGGYHIPRGTTIMVNAWAMHRDSKVWEEPNKFKPERF--EGIHSEREG--FKHIPFGMGRRACPGAAMAIRTISFALGSLIQCFE 752
            + + DL  LPYL  VIKET           PH +  +  + G+ IP  + I+VNAW +  +   W++P +F+PERF  E  H E  G  F+++PFG+GRR+CPG  +A+  +   LG L+Q FE
Sbjct:  345 VTEPDLQKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLSGFDIPAESKILVNAWWLANNPAQWKKPEEFRPERFLEEESHVEANGNDFRYLPFGVGRRSCPGIILALPILGITLGRLVQNFE 468          
BLAST of FC876836 vs. ExPASy Swiss-Prot
Match: TCMO_CATRO (Trans-cinnamate 4-monooxygenase OS=Catharanthus roseus GN=CYP73A4 PE=2 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 5.617e-19
Identity = 45/124 (36.29%), Postives = 71/124 (57.26%), Query Frame = -1
Query:  393 LNDVDLVNLPYLCCVIKETXXXXXXXXXXXPHFSSENCIVGGYHIPRGTTIMVNAWAMHRDSKVWEEPNKFKPERF----EGIHSEREGFKHIPFGMGRRACPGAAMAIRTISFALGSLIQCFE 752
            + + D   LPYL  VIKET           PH +  +  +GGY IP  + I+VNAW +  + + W++P +F+PERF      + +    F+++PFG+GRR+CPG  +A+  +   +G L+Q FE
Sbjct:  346 ITEPDTYKLPYLQAVIKETLRLRMAIPLFLPHMNLHDAKLGGYDIPAESKILVNAWFLANNPEHWKKPEEFRPERFLEEESKVEANGNDFRYLPFGVGRRSCPGIILALPILGITIGRLVQNFE 469          
BLAST of FC876836 vs. ExPASy Swiss-Prot
Match: TCMO_ARATH (Trans-cinnamate 4-monooxygenase OS=Arabidopsis thaliana GN=CYP73A5 PE=2 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 5.617e-19
Identity = 47/124 (37.90%), Postives = 72/124 (58.06%), Query Frame = -1
Query:  393 LNDVDLVNLPYLCCVIKETXXXXXXXXXXXPHFSSENCIVGGYHIPRGTTIMVNAWAMHRDSKVWEEPNKFKPERF--EGIHSEREG--FKHIPFGMGRRACPGAAMAIRTISFALGSLIQCFE 752
            + + DL  LPYL  V+KET           PH +  +  + GY IP  + I+VNAW +  +   W++P +F+PERF  E  H E  G  F+++PFG+GRR+CPG  +A+  +   +G ++Q FE
Sbjct:  346 VTEPDLHKLPYLQAVVKETLRLRMAIPLLVPHMNLHDAKLAGYDIPAESKILVNAWWLANNPNSWKKPEEFRPERFFEEESHVEANGNDFRYVPFGVGRRSCPGIILALPILGITIGRMVQNFE 469          
BLAST of FC876836 vs. ExPASy Swiss-Prot
Match: C93B1_GLYEC (Licodione synthase OS=Glycyrrhiza echinata GN=CYP93B1 PE=1 SV=2)

HSP 1 Score: 94.7449 bits (234), Expect = 5.617e-19
Identity = 46/134 (34.33%), Postives = 74/134 (55.22%), Query Frame = -1
Query:  378 MLNDVDLVNLPYLCCVIKETXXXXXXXXXXXPHFSSENCIVGGYHIPRGTTIMVNAWAMHRDSKVWEEPNKFKPERFEGIHSEREG--------FKHIPFGMGRRACPGAAMAIRTISFALGSLIQCFEWEKIG 755
            ++ + D  NLPYL  ++KET               +E C V  Y IP  + + VN W++ R+ K W+ P +F+PERF  +  +  G        F+ +PFG GRR CPG ++A++ +   LG++IQCF++  +G
Sbjct:  343 LVEESDCPNLPYLQAILKETFRLHPPVPMVTRRCVAE-CTVENYVIPEDSLLFVNVWSIGRNPKFWDNPLEFRPERFLKLEGDSSGVVDVRGSHFQLLPFGSGRRMCPGVSLAMQEVPALLGAIIQCFDFHVVG 475          
BLAST of FC876836 vs. ExPASy Swiss-Prot
Match: C76A1_SOLME (Cytochrome P450 76A1 (Fragment) OS=Solanum melongena GN=CYP76A1 PE=2 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 5.617e-19
Identity = 52/148 (35.14%), Postives = 80/148 (54.05%), Query Frame = -1
Query:  321 DVDLVNLPYLCCVIKETXXXXXXXXXXXPHFSSENCIVGGYHIPRGTTIMVNAWAMHRDSKVWEEPNKFKPERF--EGIHSEREGFKHIPFGMGRRACPGAAMAIRTISFALGSLIQCFEWE----KIGAEVDMTASYGLSLFKTVPL 746
            + D+ +LPY+  V+KE            P  + ++    GY IP+GT ++VNAWA+ RD + W+ P +FKPERF    +  + + ++ IPFG GRR C G  +  R + F  GSL+  F+WE         ++M  S G++  K  PL
Sbjct:  313 ECDIDSLPYMQAVLKEQLRLHPPLPLLIPRKAIQDTKFMGYDIPKGTQVLVNAWAIGRDPEYWDNPFEFKPERFLESKVDVKGQNYELIPFGAGRRMCVGLPLGHRMMHFTFGSLLHEFDWELPHNVSPKSINMEESMGITARKKQPL 460          
The following BLAST results are available for this feature:
BLAST of FC876836 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 242
Match NameE-valueIdentityDescription
C71B3_ARATH3.293e-1935.14Cytochrome P450 71B3 OS=Arabidopsis thaliana GN=CY... [more]
C71DC_CATRO4.300e-1935.71Tabersonine 16-hydroxylase (Fragment) OS=Catharant... [more]
C71B4_ARATH4.300e-1938.19Cytochrome P450 71B4 OS=Arabidopsis thaliana GN=CY... [more]
TCMO_ZINEL5.617e-1937.10Trans-cinnamate 4-monooxygenase OS=Zinnia elegans ... [more]
TCMO_POPKI5.617e-1938.71Trans-cinnamate 4-monooxygenase OS=Populus kitakam... [more]
TCMO_CICAR5.617e-1939.52Trans-cinnamate 4-monooxygenase OS=Cicer arietinum... [more]
TCMO_CATRO5.617e-1936.29Trans-cinnamate 4-monooxygenase OS=Catharanthus ro... [more]
TCMO_ARATH5.617e-1937.90Trans-cinnamate 4-monooxygenase OS=Arabidopsis tha... [more]
C93B1_GLYEC5.617e-1934.33Licodione synthase OS=Glycyrrhiza echinata GN=CYP9... [more]
C76A1_SOLME5.617e-1935.14Cytochrome P450 76A1 (Fragment) OS=Solanum melonge... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAN3BA08RM1 EHR Citrus clementina cDNA clone KN0AAN3BA08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876836 ID=FC876836; Name=FC876836; organism=Citrus clementina; type=EST; length=755bp
TTTTTTTTTTTTTTTTTTTTTTTTTTTTACATAATTTTGCAGTTGGCAAT
GACTGTTGAAATCAAACCGATATTAAAAAACTACAGCAAAACCACAAAAC
AGGATTATCAAATCTAAAATTTGGTCACGCAATGCCATGGCATGAAGTGA
TCTACAGTCTCTAAAGTACTGCTCTACAAATTCCAGTAAATTTTACAACC
TTTATTGAAAGTCACCTGCAAGGTCCCCTGCAGGCCCCGAAAATTTCCAG
CGGCAAGTTTACCCTAACTGGATCTGTTCAGCATTCCAATCATATTTTGC
CGCGGACTGCACATAGCCACCAAAGGCACGGTCTTAAATAGAGATAGTCC
ATAACTTGCAGTCATGTCCACCTCCGCCCCTATCTTTTCCCACTCGAAGC
ACTGTATGAGCGAACCCAAAGCAAAAGAAATTGTACGGATAGCCATGGCT
GCACCTGGGCAAGCTCTCCTCCCCATGCCAAATGGAATATGTTTGAATCC
CTCTCTTTCACTATGAATCCCTTCAAATCTTTCAGGTTTGAACTTGTTAG
GCTCCTCCCACACCTTGGAATCCCTATGCATTGCCCAGGCATTCACCATT
ATCGTCGTGCCTCGTGGTATGTGATATCCACCCACTATGCAGTTCTCAGA
AGAAAAATGTGGCAACAGAAGTGGTGCCGGAGGATATAATCGCAGCGTCT
CTTTTATGACACAGCAAAGGTATGGAAGGTTGACAAGATCCACGTCATTT
AACAT
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