FC876836

Overview
NameFC876836
Unique NameFC876836
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length755
Libraries
Library NameType
EHRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC876836 vs. ExPASy Swiss-Prot
Match: C80B2_ESCCA ((S)-N-methylcoclaurine 3'-hydroxylase isozyme 2 OS=Eschscholzia californica GN=CYP80B2 PE=2 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 4.755e-18
Identity = 55/150 (36.67%), Postives = 74/150 (49.33%), Query Frame = -1
Query:  321 LNDVDLVNLPYLCCVIKETXXXXXXXXXXXPHFSSENCIVGGYHIPRGTTIMVNAWAMHRDSKVWEEPNKFKPERF--EGIHSEREGFKHIPFGMGRRACPGAAMAIRTISFALGSLIQCFEW-EKIGAEVD---MTASYGLSLFKTVPL 752
            + + D  NLPYL   +KET           P  + E C +  Y IP+   IMVNAW + RD K W +P  F PERF    +      F  IPFG GRR CPG  +A + I+  + + +Q  +W    G  VD   +   +GL+L K  PL
Sbjct:  331 VKESDFPNLPYLEATVKETLRLHPPTPLLLPRRALETCTILNYTIPKDCQIMVNAWGIGRDPKTWIDPLTFSPERFLNSSVDFRGNDFSLIPFGAGRRICPGLPIANQFIALLVATFVQNLDWCLPNGMSVDHLIVEEKFGLTLQKEPPL 480          
BLAST of FC876836 vs. ExPASy Swiss-Prot
Match: C71B6_ARATH (Cytochrome P450 71B6 OS=Arabidopsis thaliana GN=CYP71B6 PE=2 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 4.755e-18
Identity = 54/142 (38.03%), Postives = 78/142 (54.93%), Query Frame = -1
Query:  321 DLVNLPYLCCVIKETXXXXXXXXXXXPHFSSENCIVGGYHIPRGTTIMVNAWAMHRDSKVWEEPNKFKPERFEGIHSEREG--FKHIPFGMGRRACPGAAMAIRTISFALGSLIQCFEWEKIGAEVDMTASYGLSLFKTVPL 740
            DL  L Y+  VIKET           P  +  N  + GY I  GT I VNAWA+ R+  VW++P++F PERF   + E +G  F+ +PFG GRR CP   + + T+ + L +L+  F+W K   EV +  + GL+  +  PL
Sbjct:  351 DLEALVYMKMVIKETWRLHAPSPILIPREAMTNFKIKGYDIYPGTRIHVNAWAIGRNPDVWKDPDEFIPERFVDSNVETKGTSFELLPFGSGRRGCPAMYVGLSTVEYTLANLLYHFDW-KATEEVSVEEAPGLTSHRKHPL 491          
BLAST of FC876836 vs. ExPASy Swiss-Prot
Match: C71BZ_ARATH (Cytochrome P450 71B38 OS=Arabidopsis thaliana GN=CYP71B38 PE=2 SV=2)

HSP 1 Score: 91.2781 bits (225), Expect = 6.210e-18
Identity = 51/151 (33.77%), Postives = 78/151 (51.66%), Query Frame = -1
Query:  318 LNDVDLVNLPYLCCVIKETXXXXXXXXXXXPHFSSENCIVGGYHIPRGTTIMVNAWAMHRDSKVWEEPNKFKPERF--EGIHSEREGFKHIPFGMGRRACPGAAMAIRTISFALGSLIQCFEWEKIGA----EVDMTASYGLSLFKTVPLV 752
            + + DL  + YL  V+ ET           P  +  +  + GY+IP+ T I +N +A+ RD K W++P +F PERF    I  + + F+ +PFG GRR CPG A  I  +   L +L+  F+W         ++DM    G ++ K VPLV
Sbjct:  342 ITEEDLEKVEYLKLVMVETFRLHPPAPLLLPRLTMSDIKIQGYNIPKNTMIQINTYAIGRDPKYWKQPGEFIPERFLDSPIDYKGQHFELLPFGAGRRICPGMATGITMVELGLLNLLYFFDWSLPNGMTIEDIDMEEDEGFAIAKKVPLV 492          
BLAST of FC876836 vs. ExPASy Swiss-Prot
Match: C71AQ_ARATH (Cytochrome P450 71A26 OS=Arabidopsis thaliana GN=CYP71A26 PE=3 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 1.059e-17
Identity = 48/156 (30.77%), Postives = 84/156 (53.85%), Query Frame = -1
Query:  306 LNDVDLVNLPYLCCVIKETXXXXXXXXXXXPHFSSENCIVGGYHIPRGTTIMVNAWAMHRDSKVW-EEPNKFKPERF--EGIHSEREGFKHIPFGMGRRACPGAAMAIRTISFALGSLIQCFEW----EKIGAEVDMTASYGLSLFKTVPLVAMCS 752
            +++ ++ N+ YL  VIKE            PH S+++  +G +HIP GT +++NAWA+ R++  W  +  +F+PER     +    + F+ IPFG GRR CP  + A+      L +L+  F+W    E    + ++  S G+++ +  PL A+ S
Sbjct:  331 VSEEEIQNMSYLKAVIKEALRLHPPLPLMVPHESTQDVRLGDHHIPAGTQVLINAWAIGREAATWGPDVEEFRPERHLDSSVDYRGQAFELIPFGSGRRICPAISFAVVLNEVVLANLVHRFDWRLSVESTEDQTEVAESTGIAIHRMFPLYAIAS 486          
BLAST of FC876836 vs. ExPASy Swiss-Prot
Match: C71AN_ARATH (Cytochrome P450 71A23 OS=Arabidopsis thaliana GN=CYP71A23 PE=2 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 1.059e-17
Identity = 51/152 (33.55%), Postives = 81/152 (53.29%), Query Frame = -1
Query:  306 LNDVDLVNLPYLCCVIKETXXXXXXXXXXXPHFSSENCIVGGYHIPRGTTIMVNAWAMHRDSKVW-EEPNKFKPERFEGIHSEREG--FKHIPFGMGRRACPGAAMAIRTISFALGSLIQCFEWEKIGAEVDMTASYGLSLFKTVPLVAMCS 752
            +++ D+  + YL  V+KE            PH S+++  +   HIP GT ++VN WA+ R++  W  + N+F+PER     S+  G  F+ IPFG GRR CPG + A+      L +L+  F+W+ I  E D+  S G  + +  PL  + S
Sbjct:  329 VSEDDIQGMEYLKAVVKEALRLHPPVPLMVPHQSTQDVRLRDNHIPAGTQVIVNLWAVGREAATWGPDANEFRPERHLESPSDFRGQDFELIPFGAGRRMCPGISFAVVLNEVVLANLVHGFDWQSIDDETDVAESIGSVIRRMHPLYVIPS 480          
BLAST of FC876836 vs. ExPASy Swiss-Prot
Match: C71AE_ARATH (Cytochrome P450 71A14 OS=Arabidopsis thaliana GN=CYP71A14 PE=2 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.383e-17
Identity = 52/157 (33.12%), Postives = 80/157 (50.96%), Query Frame = -1
Query:  303 LNDVDLVNLPYLCCVIKETXXXXXXXXXXXPHFSSENCIVGGYHIPRGTTIMVNAWAMHRDSKVWE-EPNKFKPERFEGIHSEREG--FKHIPFGMGRRACPGAAMAIRTISFALGSLIQCFEW----EKIGAEVDMTASYGLSLFKTVPLVAMCSP 752
            +++ D+ ++ YL  V+KE            P   SE+  + GY I  GT +++NAWA+ RD+  W  +  +F+PER      +  G  F+ IPFG GRR CPG   A+  +   L +L+  F W    +  G E D+  S GL + +  PL+   SP
Sbjct:  340 ISEEDVEDMKYLKAVVKEVLRLHPPLPLLVPRELSEDIKLKGYDIAAGTQVIINAWAIQRDTMTWGIDAEEFRPERHLDSLVDFRGTNFEFIPFGSGRRICPGIGFAMALVEVTLANLVNRFNWRMEVQHSGDEYDLAESTGLDVCRKFPLIVFPSP 496          
BLAST of FC876836 vs. ExPASy Swiss-Prot
Match: C71BN_ARATH (Cytochrome P450 71B23 OS=Arabidopsis thaliana GN=CYP71B23 PE=2 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 1.807e-17
Identity = 55/158 (34.81%), Postives = 78/158 (49.37%), Query Frame = -1
Query:  297 LNDVDLVNLPYLCCVIKETXXXXXXXXXXXPHFSSENCIVGGYHIPRGTTIMVNAWAMHRDSKVWEEPNKFKPERFEGIHSEREG--FKHIPFGMGRRACPGAAMAIRTISFALGSLIQCFEW----EKIGAEVDMTASYGLSLFKTVPLVAMCSPRQ 752
            + + DL  L Y   VIKET           P  +     + GY IP  T IMVN +A+ RD  +WE P +FKPERF     +  G  F+ +PFG GRR CPG  M I T+   L +L+  F+W     +   ++D+     + + K V L  + + RQ
Sbjct:  344 ITEQDLNQLNYFKLVIKETFRLHPAAPLLLPREAMAKIKIQGYDIPEKTQIMVNVYAIGRDPDLWENPEEFKPERFVDSSVDYRGLNFELLPFGSGRRICPGMTMGIATVELGLLNLLYFFDWGLPEGRTVKDIDLEEEGAIIIGKKVSLELVPTRRQ 501          
BLAST of FC876836 vs. ExPASy Swiss-Prot
Match: C71AO_ARATH (Cytochrome P450 71A24 OS=Arabidopsis thaliana GN=CYP71A24 PE=2 SV=3)

HSP 1 Score: 89.7373 bits (221), Expect = 1.807e-17
Identity = 51/154 (33.12%), Postives = 82/154 (53.25%), Query Frame = -1
Query:  312 LNDVDLVNLPYLCCVIKETXXXXXXXXXXXPHFSSENCIVGGYHIPRGTTIMVNAWAMHRDSKVW-EEPNKFKPERFEGIHSEREG--FKHIPFGMGRRACPGAAMAIRTISFALGSLIQCFEW----EKIGAEVDMTASYGLSLFKTVPLVAM 752
            +++ DL ++ YL  VIKET           PH S+ +  +  YHIP GT +M+NAWA+ R++  W  +  +F+PER    + +  G   + +PFG GRR CP  + A+      L +L+  F+W    E    + D+  S G+++ +  PL AM
Sbjct:  333 VSEDDLQDMKYLKAVIKETLRLHPPLPLMVPHESTHDVKLRDYHIPAGTHVMINAWAIGREAATWGPDAEEFRPERHLNSYVDYRGQDTELVPFGAGRRICPAISFAVVLDEVVLANLVHQFDWTLPEESTEYQTDVAESTGMAVHRMFPLFAM 486          
BLAST of FC876836 vs. ExPASy Swiss-Prot
Match: C71AJ_ARATH (Cytochrome P450 71A19 OS=Arabidopsis thaliana GN=CYP71A19 PE=2 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 1.807e-17
Identity = 51/148 (34.46%), Postives = 78/148 (52.70%), Query Frame = -1
Query:  306 LPYLCCVIKETXXXXXXXXXXXPHFSSENCIVGGYHIPRGTTIMVNAWAMHRDSKVWE-EPNKFKPERF--EGIHSEREGFKHIPFGMGRRACPGAAMAIRTISFALGSLIQCFEW----EKIGAEVDMTASYGLSLFKTVPLVAMCS 728
            + YL  VIKE            P   SE+  + GY+IP GT +++NAWA+ RD+  W  +  +F+PER     +  + + FK IPFG G+R CPG       I   L ++++ F W    E    + D+T + GL +F+  PL+A+ S
Sbjct:  341 MDYLQAVIKEALRLRPPAPLMVPRVFSEDVTLKGYNIPAGTQVIINAWAIQRDTTTWGIDAEEFRPERHLDSILDFQGQDFKFIPFGSGKRICPGIGFTSALIGVTLANIVKRFNWRMDVEPQRVQHDLTEATGLVVFRKFPLIAIPS 488          
BLAST of FC876836 vs. ExPASy Swiss-Prot
Match: TCMO_MEDSA (Trans-cinnamate 4-monooxygenase OS=Medicago sativa GN=CYP73A3 PE=2 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 2.360e-17
Identity = 47/124 (37.90%), Postives = 71/124 (57.26%), Query Frame = -1
Query:  393 LNDVDLVNLPYLCCVIKETXXXXXXXXXXXPHFSSENCIVGGYHIPRGTTIMVNAWAMHRDSKVWEEPNKFKPERF--EGIHSEREG--FKHIPFGMGRRACPGAAMAIRTISFALGSLIQCFE 752
            + + DL  LPYL  VIKET           PH +  +  + G+ IP  + I+VNAW +  +   W++P +F+PERF  E  H E  G  F+++PFG+GRR+CPG  +A+  +   +G L+Q  E
Sbjct:  347 VTEPDLHKLPYLQAVIKETLRLRMAIPLLVPHMNLHDPKLNGFDIPAESKILVNAWWLPNNPAHWKKPEEFRPERFLEEESHVEANGNDFRYLPFGVGRRSCPGIILALPILGITIGRLVQNVE 470          
The following BLAST results are available for this feature:
BLAST of FC876836 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 242
Match NameE-valueIdentityDescription
C80B2_ESCCA4.755e-1836.67(S)-N-methylcoclaurine 3'-hydroxylase isozyme 2 OS... [more]
C71B6_ARATH4.755e-1838.03Cytochrome P450 71B6 OS=Arabidopsis thaliana GN=CY... [more]
C71BZ_ARATH6.210e-1833.77Cytochrome P450 71B38 OS=Arabidopsis thaliana GN=C... [more]
C71AQ_ARATH1.059e-1730.77Cytochrome P450 71A26 OS=Arabidopsis thaliana GN=C... [more]
C71AN_ARATH1.059e-1733.55Cytochrome P450 71A23 OS=Arabidopsis thaliana GN=C... [more]
C71AE_ARATH1.383e-1733.12Cytochrome P450 71A14 OS=Arabidopsis thaliana GN=C... [more]
C71BN_ARATH1.807e-1734.81Cytochrome P450 71B23 OS=Arabidopsis thaliana GN=C... [more]
C71AO_ARATH1.807e-1733.12Cytochrome P450 71A24 OS=Arabidopsis thaliana GN=C... [more]
C71AJ_ARATH1.807e-1734.46Cytochrome P450 71A19 OS=Arabidopsis thaliana GN=C... [more]
TCMO_MEDSA2.360e-1737.90Trans-cinnamate 4-monooxygenase OS=Medicago sativa... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAN3BA08RM1 EHR Citrus clementina cDNA clone KN0AAN3BA08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876836 ID=FC876836; Name=FC876836; organism=Citrus clementina; type=EST; length=755bp
TTTTTTTTTTTTTTTTTTTTTTTTTTTTACATAATTTTGCAGTTGGCAAT
GACTGTTGAAATCAAACCGATATTAAAAAACTACAGCAAAACCACAAAAC
AGGATTATCAAATCTAAAATTTGGTCACGCAATGCCATGGCATGAAGTGA
TCTACAGTCTCTAAAGTACTGCTCTACAAATTCCAGTAAATTTTACAACC
TTTATTGAAAGTCACCTGCAAGGTCCCCTGCAGGCCCCGAAAATTTCCAG
CGGCAAGTTTACCCTAACTGGATCTGTTCAGCATTCCAATCATATTTTGC
CGCGGACTGCACATAGCCACCAAAGGCACGGTCTTAAATAGAGATAGTCC
ATAACTTGCAGTCATGTCCACCTCCGCCCCTATCTTTTCCCACTCGAAGC
ACTGTATGAGCGAACCCAAAGCAAAAGAAATTGTACGGATAGCCATGGCT
GCACCTGGGCAAGCTCTCCTCCCCATGCCAAATGGAATATGTTTGAATCC
CTCTCTTTCACTATGAATCCCTTCAAATCTTTCAGGTTTGAACTTGTTAG
GCTCCTCCCACACCTTGGAATCCCTATGCATTGCCCAGGCATTCACCATT
ATCGTCGTGCCTCGTGGTATGTGATATCCACCCACTATGCAGTTCTCAGA
AGAAAAATGTGGCAACAGAAGTGGTGCCGGAGGATATAATCGCAGCGTCT
CTTTTATGACACAGCAAAGGTATGGAAGGTTGACAAGATCCACGTCATTT
AACAT
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