FC876936
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC876936 vs. ExPASy Swiss-Prot
Match: THIO_MYCPN (Thioredoxin OS=Mycoplasma pneumoniae GN=trxA PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.920e-12 Identity = 31/87 (35.63%), Postives = 53/87 (60.92%), Query Frame = 3 Query: 351 SGSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSIATRYGIRSIPTVMIFKNGEKKDTVIGAVPKSTLTTSIEK 611 S + V+++FWA WCGPC++ P + + + V + KVN DE IA Y I S+PT+++F+ G++K IG +PK+ + + + Sbjct: 17 SNNKVIIDFWAEWCGPCKITGPEFAKAASE-VSTVAFAKVNVDEQTDIAAAYKITSLPTIVLFEKGQEKHRAIGFMPKAKIVQLVSQ 102
BLAST of FC876936 vs. ExPASy Swiss-Prot
Match: THIO_MYCGE (Thioredoxin OS=Mycoplasma genitalium GN=trxA PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.920e-12 Identity = 30/77 (38.96%), Postives = 49/77 (63.64%), Query Frame = 3 Query: 363 VLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSIATRYGIRSIPTVMIFKNGEKKDTVIGAVPKSTL 593 V+V+FWA WCGPC++ P + + ++ + KVN D+ IA Y I S+PT+++F+NG +K IG +PK+ + Sbjct: 21 VIVDFWAAWCGPCKLTSPEFQKAADEF-SDAQFVKVNVDDHTDIAAAYNITSLPTIVVFENGVEKKRAIGFMPKTKI 96
BLAST of FC876936 vs. ExPASy Swiss-Prot
Match: TRX1_YEAST (Thioredoxin-1 OS=Saccharomyces cerevisiae GN=TRX1 PE=1 SV=3) HSP 1 Score: 72.0182 bits (175), Expect = 3.813e-12 Identity = 31/73 (42.47%), Postives = 53/73 (72.60%), Query Frame = 3 Query: 363 VLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSIATRYGIRSIPTVMIFKNGEKKDTVIGAVP 581 V+V+F+A WCGPC+MI P+I++ S+QY + YK++ DE +A + + ++PT+++FKNG++ V+GA P Sbjct: 21 VVVDFYATWCGPCKMIAPMIEKFSEQY-PQADFYKLDVDELGDVAQKNEVSAMPTLLLFKNGKEVAKVVGANP 92
BLAST of FC876936 vs. ExPASy Swiss-Prot
Match: THIO_MYCGA (Thioredoxin OS=Mycoplasma gallisepticum GN=trxA PE=3 SV=2) HSP 1 Score: 72.0182 bits (175), Expect = 3.813e-12 Identity = 35/93 (37.63%), Postives = 59/93 (63.44%), Query Frame = 3 Query: 315 VTDATWQSLVLDSGSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSIATRYGIRSIPTVMIFKNGEKKDTVIGAVPKSTL 593 +T+ +L + V+V+F+A WCGPC+++ PI +E++ Q KV+ D++ I++ Y IRSIPTV+ F++G+ D IG +PK+ L Sbjct: 4 ITNKAELDQLLSTNKKVVVDFYANWCGPCKILGPIFEEVA-QDKKDWTFVKVDVDQANEISSEYEIRSIPTVIFFQDGKMADKRIGFIPKNEL 95
BLAST of FC876936 vs. ExPASy Swiss-Prot
Match: THIO_CHLPN (Thioredoxin OS=Chlamydia pneumoniae GN=trxA PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 3.813e-12 Identity = 35/83 (42.17%), Postives = 53/83 (63.86%), Query Frame = 3 Query: 363 VLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSIATRYGIRSIPTVMIFKNGEKKDTVIGAVPKSTLTTSIEK 611 VLV+F+A WCGPCRM+ PI++ L+ + + + K+N DE+ A Y + SIPT+++FK+G + V+G K LT I K Sbjct: 19 VLVDFFAEWCGPCRMLTPILENLAAE-LPHVTIGKINIDENSKPAETYEVSSIPTLILFKDGNEVARVVGLKDKEFLTNLINK 100
BLAST of FC876936 vs. ExPASy Swiss-Prot
Match: TRXH4_ARATH (Thioredoxin H-type 4 OS=Arabidopsis thaliana GN=TRX4 PE=2 SV=2) HSP 1 Score: 71.633 bits (174), Expect = 4.980e-12 Identity = 29/76 (38.16%), Postives = 50/76 (65.79%), Query Frame = 3 Query: 348 DSGSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSIATRYGIRSIPTVMIFKNGEKKDTVIGA 575 +S ++++F A WC PCRMI PI ++L+K+++ +KV+ DE S+A +G+ ++PT + K GE D ++GA Sbjct: 26 ESNKLIVIDFTASWCPPCRMIAPIFNDLAKKFMSSAIFFKVDVDELQSVAKEFGVEAMPTFVFIKAGEVVDKLVGA 101
BLAST of FC876936 vs. ExPASy Swiss-Prot
Match: THIO_CHLTR (Thioredoxin OS=Chlamydia trachomatis GN=trxA PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.109e-11 Identity = 31/83 (37.35%), Postives = 55/83 (66.27%), Query Frame = 3 Query: 363 VLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSIATRYGIRSIPTVMIFKNGEKKDTVIGAVPKSTLTTSIEK 611 VL++F+A WCGPC+M+ P+++ L+ + + + KV+ D SP A +Y + SIPT+++FK+G++ + +G K +L I K Sbjct: 19 VLIDFFAEWCGPCKMLTPVLEALAAE-LPHVTILKVDIDSSPRPAEQYSVSSIPTLILFKDGKEVERSVGLKDKDSLIKLISK 100
BLAST of FC876936 vs. ExPASy Swiss-Prot
Match: PDIA6_MESAU (Protein disulfide-isomerase A6 OS=Mesocricetus auratus GN=PDIA6 PE=1 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.109e-11 Identity = 36/87 (41.38%), Postives = 51/87 (58.62%), Query Frame = 3 Query: 303 EVPAVTDATWQSLVLDSGSPVLVEFWAPWCGPCRMIHP----IIDELSKQYVGKLKCYKVNTDESPSIATRYGIRSIPTVMIFKNGE 551 +V +TD T+ VLDS +VEF+APWCG C+ + P E+ +Q GK+K V+ + +A RYGIR PT+ IF+ GE Sbjct: 161 DVIELTDDTFDKNVLDSDDVWMVEFYAPWCGHCKNLEPEWATAATEVKEQTKGKVKLAAVDATVNQVLANRYGIRGFPTIKIFQKGE 247
BLAST of FC876936 vs. ExPASy Swiss-Prot
Match: TRXH_ORYSJ (Thioredoxin H-type OS=Oryza sativa subsp. japonica GN=TRXH PE=1 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.449e-11 Identity = 33/88 (37.50%), Postives = 54/88 (61.36%), Query Frame = 3 Query: 348 DSGSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSIATRYGIRSIPTVMIFKNGEKKDTVIGAVPKSTLTTSIEK 611 ++G V+++F A WCGPCR I P+ E +K++ G + KV+ DE +A +Y + ++PT + K+G + D V+GA K L +I K Sbjct: 26 EAGKVVIIDFTASWCGPCRFIAPVFAEYAKKFPGAV-FLKVDVDELKEVAEKYNVEAMPTFLFIKDGAEADKVVGA-RKDDLQNTIVK 111
BLAST of FC876936 vs. ExPASy Swiss-Prot
Match: TRXH_ORYSI (Thioredoxin H-type OS=Oryza sativa subsp. indica GN=TRXH PE=1 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.449e-11 Identity = 33/88 (37.50%), Postives = 54/88 (61.36%), Query Frame = 3 Query: 348 DSGSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSIATRYGIRSIPTVMIFKNGEKKDTVIGAVPKSTLTTSIEK 611 ++G V+++F A WCGPCR I P+ E +K++ G + KV+ DE +A +Y + ++PT + K+G + D V+GA K L +I K Sbjct: 26 EAGKVVIIDFTASWCGPCRFIAPVFAEYAKKFPGAV-FLKVDVDELKEVAEKYNVEAMPTFLFIKDGAEADKVVGA-RKDDLQNTIVK 111 The following BLAST results are available for this feature:
BLAST of FC876936 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 123
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876936 ID=FC876936; Name=FC876936; organism=Citrus clementina; type=EST; length=747bpback to top |