FC876936
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC876936 vs. ExPASy Swiss-Prot
Match: THIO_CHLMU (Thioredoxin OS=Chlamydia muridarum GN=trxA PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.449e-11 Identity = 31/83 (37.35%), Postives = 56/83 (67.47%), Query Frame = 3 Query: 363 VLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSIATRYGIRSIPTVMIFKNGEKKDTVIGAVPKSTLTTSIEK 611 VLV+F+A WCGPC+M+ P+++ L+ + + + K++ D SP A ++G+ SIPT+++FK+G++ + +G K +L I K Sbjct: 19 VLVDFFAEWCGPCKMLTPVLEALAAE-LPYVTILKLDIDASPRPAEQFGVSSIPTLILFKDGKEVERSVGLKDKDSLVKLISK 100
BLAST of FC876936 vs. ExPASy Swiss-Prot
Match: PDIA6_RAT (Protein disulfide-isomerase A6 OS=Rattus norvegicus GN=Pdia6 PE=1 SV=2) HSP 1 Score: 70.0922 bits (170), Expect = 1.449e-11 Identity = 37/103 (35.92%), Postives = 57/103 (55.34%), Query Frame = 3 Query: 303 EVPAVTDATWQSLVLDSGSPVLVEFWAPWCGPCRMIHP----IIDELSKQYVGKLKCYKVNTDESPSIATRYGIRSIPTVMIFKNGEKKDTVIGAVPKSTLTT 599 +V +TD T+ VLDS +VEF+APWCG C+ + P E+ +Q GK+K V+ + +A+RYGI+ PT+ IF+ GE G +S + + Sbjct: 161 DVVELTDDTFDKNVLDSEDVWMVEFYAPWCGHCKNLEPEWAAAATEVKEQTKGKVKLAAVDATVNQVLASRYGIKGFPTIKIFQKGESPVDYDGGRTRSDIVS 263
BLAST of FC876936 vs. ExPASy Swiss-Prot
Match: PDIA6_MOUSE (Protein disulfide-isomerase A6 OS=Mus musculus GN=Pdia6 PE=1 SV=3) HSP 1 Score: 70.0922 bits (170), Expect = 1.449e-11 Identity = 37/103 (35.92%), Postives = 57/103 (55.34%), Query Frame = 3 Query: 303 EVPAVTDATWQSLVLDSGSPVLVEFWAPWCGPCRMIHP----IIDELSKQYVGKLKCYKVNTDESPSIATRYGIRSIPTVMIFKNGEKKDTVIGAVPKSTLTT 599 +V +TD T+ VLDS +VEF+APWCG C+ + P E+ +Q GK+K V+ + +A+RYGI+ PT+ IF+ GE G +S + + Sbjct: 161 DVVELTDDTFDKNVLDSEDVWMVEFYAPWCGHCKNLEPEWAAAATEVKEQTKGKVKLAAVDATVNQVLASRYGIKGFPTIKIFQKGESPVDYDGGRTRSDIVS 263
BLAST of FC876936 vs. ExPASy Swiss-Prot
Match: TRXH2_BRANA (Thioredoxin H-type 2 OS=Brassica napus GN=THL-2 PE=2 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.892e-11 Identity = 31/87 (35.63%), Postives = 54/87 (62.07%), Query Frame = 3 Query: 351 SGSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSIATRYGIRSIPTVMIFKNGEKKDTVIGAVPKSTLTTSIEK 611 S ++++F A WC PCRMI P+ +L+K+++ +KV+ DE ++A +G+ ++PT ++ K+G D V+GA K L +I K Sbjct: 27 SNKLIVIDFTASWCPPCRMIAPVFADLAKKFMSSAIFFKVDVDELQNVAQEFGVEAMPTFVLIKDGNVVDKVVGA-RKEDLHATIAK 112
BLAST of FC876936 vs. ExPASy Swiss-Prot
Match: PDIA6_PONAB (Protein disulfide-isomerase A6 OS=Pongo abelii GN=PDIA6 PE=2 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.892e-11 Identity = 37/103 (35.92%), Postives = 57/103 (55.34%), Query Frame = 3 Query: 303 EVPAVTDATWQSLVLDSGSPVLVEFWAPWCGPCRMIHP----IIDELSKQYVGKLKCYKVNTDESPSIATRYGIRSIPTVMIFKNGEKKDTVIGAVPKSTLTT 599 +V +TD ++ VLDS +VEF+APWCG C+ + P E+ +Q GK+K V+ + +A+RYGIR PT+ IF+ GE G +S + + Sbjct: 161 DVIELTDDSFDKNVLDSEDVWMVEFYAPWCGHCKNLEPEWAAAASEVKEQTKGKVKLAAVDATVNQVLASRYGIRGFPTIKIFQKGESPVDYDGGRTRSDIVS 263
BLAST of FC876936 vs. ExPASy Swiss-Prot
Match: PDIA6_HUMAN (Protein disulfide-isomerase A6 OS=Homo sapiens GN=PDIA6 PE=1 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.892e-11 Identity = 37/103 (35.92%), Postives = 57/103 (55.34%), Query Frame = 3 Query: 303 EVPAVTDATWQSLVLDSGSPVLVEFWAPWCGPCRMIHP----IIDELSKQYVGKLKCYKVNTDESPSIATRYGIRSIPTVMIFKNGEKKDTVIGAVPKSTLTT 599 +V +TD ++ VLDS +VEF+APWCG C+ + P E+ +Q GK+K V+ + +A+RYGIR PT+ IF+ GE G +S + + Sbjct: 161 DVIELTDDSFDKNVLDSEDVWMVEFYAPWCGHCKNLEPEWAAAASEVKEQTKGKVKLAAVDATVNQVLASRYGIRGFPTIKIFQKGESPVDYDGGRTRSDIVS 263
BLAST of FC876936 vs. ExPASy Swiss-Prot
Match: TRXH_WHEAT (Thioredoxin H-type OS=Triticum aestivum PE=1 SV=3) HSP 1 Score: 69.3218 bits (168), Expect = 2.472e-11 Identity = 32/81 (39.51%), Postives = 53/81 (65.43%), Query Frame = 3 Query: 363 VLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSIATRYGIRSIPTVMIFKNGEKKDTVIGAVPKSTLTTSI 605 V+++F A WCGPCR++ PI +L+K++ + KV+ DE IA ++ + ++PT + K G+ KD V+GA+ K LTT + Sbjct: 43 VVIDFTASWCGPCRIMAPIFADLAKKFPAAV-FLKVDVDELKPIAEQFSVEAMPTFLFMKEGDVKDRVVGAI-KEELTTKV 121
BLAST of FC876936 vs. ExPASy Swiss-Prot
Match: TRXH1_ARATH (Thioredoxin H-type 1 OS=Arabidopsis thaliana GN=TRX1 PE=1 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.472e-11 Identity = 43/114 (37.72%), Postives = 63/114 (55.26%), Query Frame = 3 Query: 285 AQETAVEVPAVTDATWQSLVL---DSGSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSIATRYGIRSIPTVMIFKNGEKKDTVIGAVPKSTLTTSIEKFL 617 A E + T TW + +S + V+V+F A WCGPCR I P +L+K+ L KV+TDE S+A+ + I+++PT M K G+ D V+GA K L ++I K L Sbjct: 2 ASEEGQVIACHTVETWNEQLQKANESKTLVVVDFTASWCGPCRFIAPFFADLAKKLPNVL-FLKVDTDELKSVASDWAIQAMPTFMFLKEGKILDKVVGA-KKDELQSTIAKHL 113
BLAST of FC876936 vs. ExPASy Swiss-Prot
Match: NGLY1_CAEEL (Peptide-N(4)-(N-acetyl-beta-glucosaminyl)asparagine amidase OS=Caenorhabditis elegans GN=F56G4.5 PE=2 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.472e-11 Identity = 32/76 (42.11%), Postives = 47/76 (61.84%), Query Frame = 3 Query: 348 DSGSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSIATRYGIRSIPTVMIFKNGEKKDTVIGA 575 D+ ++++F+A WCGPCRMI PI ++ S +Y G KVN D + I RY I ++PT + KN ++ D V GA Sbjct: 20 DANRLIIIDFFANWCGPCRMISPIFEQFSAEY-GNATFLKVNCDVARDIVQRYNISAMPTFIFLKNRQQVDMVRGA 94
BLAST of FC876936 vs. ExPASy Swiss-Prot
Match: TXL1_SCHPO (Thioredoxin-like protein 1 OS=Schizosaccharomyces pombe GN=txl1 PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 4.216e-11 Identity = 33/87 (37.93%), Postives = 54/87 (62.07%), Query Frame = 3 Query: 330 WQSLVLDSGSPVLVEFWAPWCGPCRMIHPIIDELSKQYVG-KLKCYKVNTDESPSIATRYGIRSIPTVMIFKNGEKKDTVIGAVPKS 587 W S + SG + V+ +A WCGPC+ I P+ +L+ +Y K KVN DE IA+ G++++PT + F+NG++ D + GA P++ Sbjct: 12 WISTIPKSGY-LAVDCYADWCGPCKAISPLFSQLASKYASPKFVFAKVNVDEQRQIASGLGVKAMPTFVFFENGKQIDMLTGANPQA 97 The following BLAST results are available for this feature:
BLAST of FC876936 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 123
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876936 ID=FC876936; Name=FC876936; organism=Citrus clementina; type=EST; length=747bpback to top |