FC876936
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC876936 vs. ExPASy Swiss-Prot
Match: THIO_HELPY (Thioredoxin OS=Helicobacter pylori GN=trxA PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 2.913e-20 Identity = 42/84 (50.00%), Postives = 58/84 (69.05%), Query Frame = 3 Query: 366 LVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSIATRYGIRSIPTVMIFKNGEKKDTVIGAVPKSTLTTSIEKFL 617 LV+FWAPWCGPC+M+ P+IDEL+ +Y GK K KVNTDE ++ ++GIRSIPT++ K+GE ++G K L + K L Sbjct: 22 LVDFWAPWCGPCKMLSPVIDELASEYEGKAKICKVNTDEQEELSAKFGIRSIPTLLFTKDGEVVHQLVGVQTKVALKEQLNKLL 105
BLAST of FC876936 vs. ExPASy Swiss-Prot
Match: THIO_HELPJ (Thioredoxin OS=Helicobacter pylori J99 GN=trxA PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 2.913e-20 Identity = 42/84 (50.00%), Postives = 58/84 (69.05%), Query Frame = 3 Query: 366 LVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSIATRYGIRSIPTVMIFKNGEKKDTVIGAVPKSTLTTSIEKFL 617 LV+FWAPWCGPC+M+ P+IDEL+ +Y GK K KVNTDE ++ ++GIRSIPT++ K+GE ++G K L + K L Sbjct: 22 LVDFWAPWCGPCKMLSPVIDELASEYEGKAKICKVNTDEQEELSAKFGIRSIPTLLFTKDGEVVHQLVGVQTKVALKEQLNKLL 105
BLAST of FC876936 vs. ExPASy Swiss-Prot
Match: THIO_STAS1 (Thioredoxin OS=Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229) GN=trxA PE=3 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 6.489e-20 Identity = 42/84 (50.00%), Postives = 59/84 (70.24%), Query Frame = 3 Query: 366 LVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSIATRYGIRSIPTVMIFKNGEKKDTVIGAVPKSTLTTSIEKFL 617 LV+FWA WCGPC+MI P+++EL+ Y GK K++ DE+PS A ++ + SIPT+++FK+GE D V+G PK L IEK L Sbjct: 21 LVDFWATWCGPCKMIAPVLEELAGDYDGKANILKLDVDENPSTAAKFEVMSIPTLIVFKDGEPVDKVVGFQPKENLAEVIEKHL 104
BLAST of FC876936 vs. ExPASy Swiss-Prot
Match: THIO_THIRO (Thioredoxin (Fragment) OS=Thiocapsa roseopersicina GN=trxA PE=3 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 8.475e-20 Identity = 41/83 (49.40%), Postives = 61/83 (73.49%), Query Frame = 3 Query: 315 VTDATWQSLVLDSGSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSIATRYGIRSIPTVMIFKNGEKKDT 563 VTD +++ VL S PVLV++WA WCGPC+MI P++DE++ +Y G++K K+N DE+P+ RYGIR IPT+M+ + E + T Sbjct: 8 VTDDSFEDEVLKSLEPVLVDYWADWCGPCKMIAPVLDEIAGEYAGRIKVAKLNIDENPNTPRRYGIRGIPTLMLSRQSEVEAT 90
BLAST of FC876936 vs. ExPASy Swiss-Prot
Match: THIO_STRCL (Thioredoxin OS=Streptomyces clavuligerus GN=trxA PE=1 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 8.475e-20 Identity = 42/93 (45.16%), Postives = 68/93 (73.12%), Query Frame = 3 Query: 315 VTDATWQSLVLDSGSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSIATRYGIRSIPTVMIFKNGEKKDTVIGAVPKSTL 593 VTD T+++ VL S PVLV+FWA WCGPCR I P ++ ++ ++ G+++ K+N D++P+ A +YG+ SIPT+ +++ GE T++GA PK+ L Sbjct: 8 VTDDTFEADVLKSEKPVLVDFWAEWCGPCRQIAPSLEAIT-EHGGQIEIVKLNIDQNPATAAKYGVMSIPTLNVYQGGEVVKTIVGAKPKAAL 99
BLAST of FC876936 vs. ExPASy Swiss-Prot
Match: THIO_RHORU (Thioredoxin OS=Rhodospirillum rubrum GN=trxA PE=1 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 8.475e-20 Identity = 44/98 (44.90%), Postives = 65/98 (66.33%), Query Frame = 3 Query: 315 VTDATWQSLVLDSGSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSIATRYGIRSIPTVMIFKNGEKKDTVIGAVPKSTLTTSIE 608 V+DA+++ VL + P V+FWA WCGPCR P ++EL+ K+ K+N DE+P ++YG+R IPT+MIFK+G+ T IGA+PK+ L +E Sbjct: 4 VSDASFEEDVLKADGPNXVDFWAEWCGPCRQXAPALEELATALGDKVTVAKINIDENPQTPSKYGVRGIPTLMIFKDGQVAATKIGALPKTKLFEWVE 101
BLAST of FC876936 vs. ExPASy Swiss-Prot
Match: THIO_BACSU (Thioredoxin OS=Bacillus subtilis GN=trxA PE=1 SV=3) HSP 1 Score: 96.6709 bits (239), Expect = 1.446e-19 Identity = 45/103 (43.69%), Postives = 66/103 (64.08%), Query Frame = 3 Query: 312 AVTDATWQSLVLD-SGSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSIATRYGIRSIPTVMIFKNGEKKDTVIGAVPKSTLTTSIEKFL 617 A+ AT QS + S VL +FWAPWCGPC+MI P+++EL ++ KLK K++ DE+ A +YG+ SIPT+++ K+GE +T +G PK L + K L Sbjct: 2 AIVKATDQSFSAETSEGVVLADFWAPWCGPCKMIAPVLEELDQEMGDKLKIVKIDVDENQETAGKYGVMSIPTLLVLKDGEVVETSVGFKPKEALQELVNKHL 104
BLAST of FC876936 vs. ExPASy Swiss-Prot
Match: THIO_STAHJ (Thioredoxin OS=Staphylococcus haemolyticus (strain JCSC1435) GN=trxA PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 3.221e-19 Identity = 40/84 (47.62%), Postives = 59/84 (70.24%), Query Frame = 3 Query: 366 LVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSIATRYGIRSIPTVMIFKNGEKKDTVIGAVPKSTLTTSIEKFL 617 LV+FWA WCGPC+MI P+++EL+ Y GK K++ DE+PS A ++ + SIPT+++FK+GE D V+G PK L ++K L Sbjct: 21 LVDFWATWCGPCKMIAPVLEELAGDYDGKADILKLDVDENPSTAAKFEVMSIPTLIVFKDGEPVDKVVGFQPKENLAEVLDKHL 104
BLAST of FC876936 vs. ExPASy Swiss-Prot
Match: THIO_BUCBP (Thioredoxin OS=Buchnera aphidicola subsp. Baizongia pistaciae GN=trxA PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 4.206e-19 Identity = 40/101 (39.60%), Postives = 67/101 (66.34%), Query Frame = 3 Query: 315 VTDATWQSLVLDSGSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSIATRYGIRSIPTVMIFKNGEKKDTVIGAVPKSTLTTSIEKFL 617 +TD ++ +L+S VLV+FWA WC PC+++ PI+++++K+Y KL K+N D++P+ A +Y IR IP +++FKN E T +GA+ K L + +L Sbjct: 8 LTDGIFKQYILESKKAVLVDFWAEWCNPCKILAPILEDIAKEYEHKLIVTKINIDKNPNTAPKYSIRGIPALLLFKNSELVGTKVGALSKVQLKDFLNLYL 108
BLAST of FC876936 vs. ExPASy Swiss-Prot
Match: THIO_BUCAI (Thioredoxin OS=Buchnera aphidicola subsp. Acyrthosiphon pisum GN=trxA PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 9.371e-19 Identity = 43/99 (43.43%), Postives = 67/99 (67.68%), Query Frame = 3 Query: 315 VTDATWQSLVLDSGSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSIATRYGIRSIPTVMIFKNGEKKDTVIGAVPKSTLTTSIEK 611 +TD ++ VL+S S LV+FWA WC PC+++ PI++E+SK+Y K+ K+N +E+P+ A Y IRSIPT+++F N E T +GAV K L +++ Sbjct: 7 LTDQNFEEQVLNSKSFFLVDFWAQWCNPCKILAPILEEISKEYSNKVIVGKLNIEENPNTAPVYSIRSIPTLLLFNNSEVLATKVGAVSKLELKEFLDE 105 The following BLAST results are available for this feature:
BLAST of FC876936 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 123
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876936 ID=FC876936; Name=FC876936; organism=Citrus clementina; type=EST; length=747bpback to top |