FC876936
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC876936 vs. ExPASy Swiss-Prot
Match: THIO1_SYNY3 (Thioredoxin-like protein slr0233 OS=Synechocystis sp. (strain PCC 6803) GN=slr0233 PE=3 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 8.209e-15 Identity = 34/98 (34.69%), Postives = 64/98 (65.31%), Query Frame = 3 Query: 324 ATWQSLVLDSGSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSIATRYGIRSIPTVMIFKNGEKKDTVIGAVPKSTLTTSIEKFL 617 A + ++ S PVLV+F+A WCGPC+M+ PI++++ +++ K++TD+ P+IAT+Y I+S+PT+++FK G+ + G + L ++ F+ Sbjct: 8 ANFAEMLAGSPKPVLVDFYATWCGPCQMMAPILEQVGSHLRQQIQVVKIDTDKYPAIATQYQIQSLPTLVLFKQGQPVHRMEGVQQAAQLIQQLQVFV 105
BLAST of FC876936 vs. ExPASy Swiss-Prot
Match: THIO2_ANASP (Thioredoxin-2 OS=Anabaena sp. (strain PCC 7120) GN=trxB PE=1 SV=3) HSP 1 Score: 79.7221 bits (195), Expect = 1.829e-14 Identity = 35/104 (33.65%), Postives = 60/104 (57.69%), Query Frame = 3 Query: 306 VPAVTDATWQSLVLDSGSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSIATRYGIRSIPTVMIFKNGEKKDTVIGAVPKSTLTTSIEKFL 617 V +TDA ++S VL + PVLV FWA WCGPC+++ P+I+ + Y +LK K+ D +P+ +Y + +P + + K + D+ G + K L + ++ L Sbjct: 5 VITITDAEFESEVLKAEQPVLVYFWASWCGPCQLMSPLINLAANTYSDRLKVVKLEIDPNPTTVKKYKVEGVPALRLVKGEQILDSTEGVISKDKLLSFLDTHL 108
BLAST of FC876936 vs. ExPASy Swiss-Prot
Match: THIO2_SYNY3 (Thioredoxin-like protein slr1139 OS=Synechocystis sp. (strain PCC 6803) GN=slr1139 PE=1 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 2.388e-14 Identity = 37/101 (36.63%), Postives = 56/101 (55.45%), Query Frame = 3 Query: 315 VTDATWQSLVLDSGSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSIATRYGIRSIPTVMIFKNGEKKDTVIGAVPKSTLTTSIEKFL 617 +TDA ++ PVLV FWA WCGPCR++ P I ++K Y KLK K+ D +P+ + + +P + +FKN E T GA+ K L +++ L Sbjct: 6 ITDAEFEQETQGQTKPVLVYFWASWCGPCRLMAPAIQAIAKDYGDKLKVLKLEVDPNPAAVAQCKVEGVPALRLFKNNELVMTHEGAIAKPKLLELLKEEL 106
BLAST of FC876936 vs. ExPASy Swiss-Prot
Match: THIO_CHLCV (Thioredoxin OS=Chlamydophila caviae GN=trxA PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 6.949e-14 Identity = 34/83 (40.96%), Postives = 57/83 (68.67%), Query Frame = 3 Query: 363 VLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSIATRYGIRSIPTVMIFKNGEKKDTVIGAVPKSTLTTSIEK 611 VL++F+A WCGPC+M+ P+++ L + V + KVN D+ P+ A +YG+ SIPT+++FK+G++ D V+G K +L I + Sbjct: 19 VLIDFFAEWCGPCKMLTPVLESLEAE-VSSVLIGKVNIDDHPAPAEQYGVSSIPTLILFKDGKEVDRVVGLKDKDSLIRLINQ 100
BLAST of FC876936 vs. ExPASy Swiss-Prot
Match: TRXX_ARATH (Thioredoxin-X, chloroplastic OS=Arabidopsis thaliana GN=ATHX PE=2 SV=2) HSP 1 Score: 76.6406 bits (187), Expect = 1.548e-13 Identity = 36/106 (33.96%), Postives = 64/106 (60.38%), Query Frame = 3 Query: 306 VPAVTDATWQSLVLDSGSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSIATRYGIRSIPTVMIFKNGEK--KDTVIGAVPKSTLTTSIEKFL 617 + + ++ + S VL+S PVLVEF A WCGPC++I+P ++ LS++Y KL K++ D +P + + + +P ++FK+G++ GA+ K+ L I+ L Sbjct: 71 IKEIGESEFSSTVLESAQPVLVEFVATWCGPCKLIYPAMEALSQEYGDKLTIVKIDHDANPKLIAEFKVYGLPHFILFKDGKEVPGSRREGAITKAKLKEYIDGLL 176
BLAST of FC876936 vs. ExPASy Swiss-Prot
Match: THIO_PENCH (Thioredoxin OS=Penicillium chrysogenum GN=TRXA PE=1 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.641e-13 Identity = 35/91 (38.46%), Postives = 57/91 (62.64%), Query Frame = 3 Query: 309 PAVTDATWQSLVLDSGSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSIATRYGIRSIPTVMIFKNGEKKDTVIGAVP 581 P + A ++ V D+ PV+V+F A WCGPC+ I P +++LS+ + G ++ YKV+ DE +A G+ ++PT +K GE+ + V GA P Sbjct: 5 PIKSVAEYKEKVTDATGPVVVDFHATWCGPCKAIAPALEKLSETHTG-IQFYKVDVDELSEVAASNGVSAMPTFHFYKGGERNEEVKGANP 94
BLAST of FC876936 vs. ExPASy Swiss-Prot
Match: THIO_COPCM (Thioredoxin OS=Coprinus comatus PE=1 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.641e-13 Identity = 34/91 (37.36%), Postives = 60/91 (65.93%), Query Frame = 3 Query: 348 DSGSPVLVEFWAPWCGPCRMIHPIIDELSKQY-VGKLKCYKVNTDESPSIATRYGIRSIPTVMIFKNGEKKDTVIGAVPKSTLTTSIEKFL 617 +SG ++++FWA WCGPCR+I PI ++ S++Y + KV+ D + I+ IR++PT ++K+G+K D ++GA P + L + ++K L Sbjct: 16 NSGKIIIIDFWATWCGPCRVISPIFEKFSEKYGANNIVFAKVDVDTASDISEEAKIRAMPTFQVYKDGQKIDELVGANP-TALESLVQKSL 105
BLAST of FC876936 vs. ExPASy Swiss-Prot
Match: NGLY1_CAEBR (Peptide-N(4)-(N-acetyl-beta-glucosaminyl)asparagine amidase OS=Caenorhabditis briggsae GN=png-1 PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 4.504e-13 Identity = 36/84 (42.86%), Postives = 53/84 (63.10%), Query Frame = 3 Query: 348 DSGSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSIATRYGIRSIPTVMIFKNGEKKDTVIGAVPKSTLTT 599 DS ++V+F+A WCGPCRMI P + LS ++ G KVNTD + I RY I ++PT + FKN ++ D+V GA + ++T Sbjct: 20 DSNRLIIVDFFANWCGPCRMISPAFERLSMEF-GNATFLKVNTDLARDIVMRYSISAMPTFLFFKNKQQVDSVRGANESAIIST 102
BLAST of FC876936 vs. ExPASy Swiss-Prot
Match: TRXH_CHLRE (Thioredoxin H-type OS=Chlamydomonas reinhardtii GN=TRXH PE=1 SV=3) HSP 1 Score: 74.3294 bits (181), Expect = 7.683e-13 Identity = 31/72 (43.06%), Postives = 48/72 (66.67%), Query Frame = 3 Query: 360 PVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSIATRYGIRSIPTVMIFKNGEKKDTVIGA 575 P++V+F A WCGPC+MI P+ + LS Y GK+ KV+ D ++A GI ++PT ++K+G K D ++GA Sbjct: 27 PIVVDFTATWCGPCKMIAPLFETLSNDYAGKVIFLKVDVDAVAAVAEAAGITAMPTFHVYKDGVKADDLVGA 98
BLAST of FC876936 vs. ExPASy Swiss-Prot
Match: THIO_EMENI (Thioredoxin OS=Emericella nidulans GN=TRX1 PE=1 SV=2) HSP 1 Score: 73.9442 bits (180), Expect = 1.003e-12 Identity = 33/91 (36.26%), Postives = 57/91 (62.64%), Query Frame = 3 Query: 309 PAVTDATWQSLVLDSGSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSIATRYGIRSIPTVMIFKNGEKKDTVIGAVP 581 P + A +Q VL++ V+V+ +A WCGPC+ I P +++ ++ Y Y+++ DE +A GIR++PT ++FK+G+K V+GA P Sbjct: 9 PITSKAEFQEKVLNAKGFVVVDCFATWCGPCKAIAPTVEKFAQTYTDA-SFYQIDVDELSEVAAELGIRAMPTFLLFKDGQKVSDVVGANP 98 The following BLAST results are available for this feature:
BLAST of FC876936 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 123
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876936 ID=FC876936; Name=FC876936; organism=Citrus clementina; type=EST; length=747bpback to top |