FC877175
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC877175 vs. ExPASy Swiss-Prot
Match: KSL4_ORYSJ (Syn-pimara-7,15-diene synthase OS=Oryza sativa subsp. japonica GN=KSL4 PE=1 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 7.505e-15 Identity = 47/183 (25.68%), Postives = 89/183 (48.63%), Query Frame = 2 Query: 20 IMKWYETFASWLTEATWSKSGRTPSMEEYLETGMISIAAHTLVLTASCFLNPSLPNYKFRPAQYDTVTKLLMLVPRLLNDIQSYQKEIADGKQNSVILYLRENPEA-DIEDSVAYVRXXXXXXXXXXXXXXXMDGFSDLPRPCKQLHLFCMKAFQMFFHSSNRYDSNTEMIDDVQKAFYIPLK 565 + W + S T+A W +S P+MEEY++ +++ A +L A F+ +L + A+YD + +L+ RL NDIQS+++E DGK NSV L + ++ + +E++ + + +P+ CK++ K +F+ ++ + S EM+ + + PLK Sbjct: 657 VESWLDYLRSLATDAEWQRSKYVPTMEEYMKNSIVTFALGPTILIALYFMGQNLWEDIVKNAEYDELFRLMNTCGRLQNDIQSFERECKDGKLNSVSLLVLDSKDVMSVEEAKEAINESISSCRRELLRLVVRED-GVIPKSCKEMFWNLYKTSHVFYSQADGFSSPKEMMGAMNGVIFEPLK 838
BLAST of FC877175 vs. ExPASy Swiss-Prot
Match: KSL4_ORYSI (Syn-pimara-7,15-diene synthase OS=Oryza sativa subsp. indica GN=KSL4 PE=2 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 7.505e-15 Identity = 47/183 (25.68%), Postives = 89/183 (48.63%), Query Frame = 2 Query: 20 IMKWYETFASWLTEATWSKSGRTPSMEEYLETGMISIAAHTLVLTASCFLNPSLPNYKFRPAQYDTVTKLLMLVPRLLNDIQSYQKEIADGKQNSVILYLRENPEA-DIEDSVAYVRXXXXXXXXXXXXXXXMDGFSDLPRPCKQLHLFCMKAFQMFFHSSNRYDSNTEMIDDVQKAFYIPLK 565 + W + S T+A W +S P+MEEY++ +++ A +L A F+ +L + A+YD + +L+ RL NDIQS+++E DGK NSV L + ++ + +E++ + + +P+ CK++ K +F+ ++ + S EM+ + + PLK Sbjct: 655 VESWLDYLRSLATDAEWQRSKYVPTMEEYMKNSIVTFALGPTILIALYFMGQNLWEDIVKNAEYDELFRLMNTCGRLQNDIQSFERECKDGKLNSVSLLVLDSKDVMSVEEAKEAINESISSCRRELLRLVVRED-GVIPKSCKEMFWNLYKTSHVFYSQADGFSSPKEMMGAMNGVIFEPLK 836
BLAST of FC877175 vs. ExPASy Swiss-Prot
Match: TPSD1_GINBI (Levopimaradiene synthase, chloroplastic OS=Ginkgo biloba GN=LPS PE=1 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.198e-12 Identity = 56/183 (30.60%), Postives = 90/183 (49.18%), Query Frame = 2 Query: 29 WYETFASWLTEATWSKSGRTPSMEEYLETGMISIAAHTLVLTASCFLNPSLPNYKFRPAQYDTVTKLLMLVP---RLLNDIQSYQKEIADGK-QNSVILYLRENPEADIEDSVAYVRXXXXXXXXXXXXXXXMDGFSDLPRPCKQLHLFCMKAFQMFFHSSNRYD-SNTEMIDDVQKAFYIPL 562 W AS+ EA WS + P+ EY+E +SIA T+VL + F LP+Y + Q D +K L LV RL+ND ++YQ E G+ +SV Y+RENPE E+++++V + S+ P ++L + Q+F+ + + S+ EM D V + + P+ Sbjct: 693 WEGLLASYTKEAEWSAAKYVPTFNEYVENAKVSIALATVVLNSIFFTGELLPDYILQ--QVDLRSKFLHLVSLTGRLINDTKTYQAERNRGELVSSVQCYMRENPECTEEEALSHV-YGIIDNALKELNWELANPASNAPLCVRRLLFNTARVMQLFYMYRDGFGISDKEMKDHVSRTLFDPV 872
BLAST of FC877175 vs. ExPASy Swiss-Prot
Match: KSB_CUCMA (Ent-kaur-16-ene synthase, chloroplastic OS=Cucurbita maxima PE=1 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 5.947e-12 Identity = 47/181 (25.97%), Postives = 79/181 (43.65%), Query Frame = 2 Query: 29 WYETFASWLTEATWSKSGRTPSMEEYLETGMISIAAHTLVLTASCFLNPSLPNYKFRPAQYDTVTKLLMLVPRLLNDIQSYQKEIADGKQNSVILYLRE-NPEADIEDSVAYVRXXXXXXXXXXXXXXXMDGFSDLPRPCKQLHLFCMKAFQMFFHSSNRYDSNTEMIDDVQKAFYIPLKL 568 W EA WS + PSM EY+E +S A ++L F+ P L +Y + KL+ RL NDI+SY +E +GK N + L++ + E+++ ++ + + +PR CK L M +F+ + Y SN +++ V+ F P+ L Sbjct: 605 WLALLKVMRKEAEWSTNKVVPSMGEYMEQAHVSFALGPIILPMLFFVGPKLSEEMIGSCEYQKLYKLMSTAGRLKNDIRSYDRECKEGKLNILSLWMIDGGGNVTKEEAIEAIKGDFERAIRELLGLVLQEN-TTIPRACKDLFWKLMSIVNLFYMEDDGYTSN-RLMNTVKAMFEQPMDL 783 The following BLAST results are available for this feature:
BLAST of FC877175 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 14
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Sequences
The
following sequences are available for this feature:
EST sequence >FC877175 ID=FC877175; Name=FC877175; organism=Citrus clementina; type=EST; length=708bpback to top |