FC877872
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC877872 vs. ExPASy Swiss-Prot
Match: IF2A_SCHPO (Eukaryotic translation initiation factor 2 subunit alpha OS=Schizosaccharomyces pombe GN=tif211 PE=1 SV=1) HSP 1 Score: 199.519 bits (506), Expect = 2.074e-50 Identity = 95/154 (61.69%), Postives = 115/154 (74.68%), Query Frame = 1 Query: 124 CRMYEARYPEVDMAVMIQVKNIADMGAYVSLLEYNNIEGMILFSEXXXXXXXXXXXXXKVGRIEPVMVLRVDKEKGYIDLSKRRVSEEDIQACEERYNKSKLVHSIMRHVAETLGIDLEELYVNIGWPLYRKYGHAFEAFKIIVTDPDSVLNSL 585 CRMYE R+PEVD V++ V+ I +MGAYV LLEY+NIEGM+L SE +VGR E V+VLRVDKEKGYIDLSKRRVS ED+ CEER+NKSK VHSIMRH+AE + LE +Y IGWPLYRKYGHA++AFK+ +++PD V L Sbjct: 6 CRMYENRFPEVDELVVVNVRQIQEMGAYVKLLEYDNIEGMVLLSELSRRRIRSVQKHIRVGRNEVVVVLRVDKEKGYIDLSKRRVSPEDVVKCEERFNKSKAVHSIMRHIAEKHNVPLETMYTTIGWPLYRKYGHAYDAFKLAISNPDHVFEGL 159
BLAST of FC877872 vs. ExPASy Swiss-Prot
Match: IF2A_PONAB (Eukaryotic translation initiation factor 2 subunit 1 OS=Pongo abelii GN=EIF2S1 PE=2 SV=1) HSP 1 Score: 158.688 bits (400), Expect = 9.805e-48 Identity = 90/180 (50.00%), Postives = 117/180 (65.00%), Query Frame = 1 Query: 112 PNLECRMYEARYPEVDMAVMIQVKNIADMGAYVSLLEYNNIEGMILFSEXXXXXXXXXXXXXKVGRIEPVMVLRVDKEKGYIDLSKRRVSEEDIQACEERYNKSKLVHSIMRHVAETLGI----DLEELYVNIGWPLYRKYGH----AFEAFKIIVTDPDSVLNSLTREVKEIGPDGQEV 627 P L CR Y+ ++PEV+ VM+ V++IA+MGAYVSLLEYNNIEGMIL SE ++GR E V+V+RVDKEKGYIDLSKRRVS E+ CE+++ KSK V+SI+RHVAE L LE L+ W KY A++AFK V+DP S+L+SL ++ D +EV Sbjct: 2 PGLSCRFYQHKFPEVEDVVMVNVRSIAEMGAYVSLLEYNNIEGMILLSELSRRRIRSINKLIRIGRNERVVVIRVDKEKGYIDLSKRRVSPEEAIKCEDKFTKSKTVYSILRHVAEVLEYTKDEQLESLFQRTAWVFDDKYKRPGYGAYDAFKHAVSDP-SILDSL-----DLNEDEREV 175 HSP 2 Score: 53.5286 bits (127), Expect = 9.805e-48 Identity = 21/44 (47.73%), Postives = 35/44 (79.55%), Query Frame = 2 Query: 725 EEVKDALVKNIRRRMTPQPLKIRADIEMKCFQFDGVLHIKDAMR 856 E+ ++ L+ NI RR+TPQ +KIRADIE+ C+ ++G+ +K+A+R Sbjct: 170 EDEREVLINNINRRLTPQAVKIRADIEVACYGYEGIDAVKEALR 213
BLAST of FC877872 vs. ExPASy Swiss-Prot
Match: IF2A_RAT (Eukaryotic translation initiation factor 2 subunit 1 OS=Rattus norvegicus GN=Eif2s1 PE=1 SV=2) HSP 1 Score: 158.303 bits (399), Expect = 1.278e-47 Identity = 90/180 (50.00%), Postives = 117/180 (65.00%), Query Frame = 1 Query: 112 PNLECRMYEARYPEVDMAVMIQVKNIADMGAYVSLLEYNNIEGMILFSEXXXXXXXXXXXXXKVGRIEPVMVLRVDKEKGYIDLSKRRVSEEDIQACEERYNKSKLVHSIMRHVAETLGI----DLEELYVNIGWPLYRKYGH----AFEAFKIIVTDPDSVLNSLTREVKEIGPDGQEV 627 P L CR Y+ ++PEV+ VM+ V++IA+MGAYVSLLEYNNIEGMIL SE ++GR E V+V+RVDKEKGYIDLSKRRVS E+ CE+++ KSK V+SI+RHVAE L LE L+ W KY A++AFK V+DP S+L+SL ++ D +EV Sbjct: 2 PGLSCRFYQHKFPEVEDVVMVNVRSIAEMGAYVSLLEYNNIEGMILLSELSRRRIRSINKLIRIGRNECVVVIRVDKEKGYIDLSKRRVSPEEAIKCEDKFTKSKTVYSILRHVAEVLEYTKDEQLESLFQRTAWVFDDKYKRPGYGAYDAFKHAVSDP-SILDSL-----DLNEDEREV 175 HSP 2 Score: 53.5286 bits (127), Expect = 1.278e-47 Identity = 21/44 (47.73%), Postives = 35/44 (79.55%), Query Frame = 2 Query: 725 EEVKDALVKNIRRRMTPQPLKIRADIEMKCFQFDGVLHIKDAMR 856 E+ ++ L+ NI RR+TPQ +KIRADIE+ C+ ++G+ +K+A+R Sbjct: 170 EDEREVLINNINRRLTPQAVKIRADIEVACYGYEGIDAVKEALR 213
BLAST of FC877872 vs. ExPASy Swiss-Prot
Match: IF2A_MOUSE (Eukaryotic translation initiation factor 2 subunit 1 OS=Mus musculus GN=Eif2s1 PE=1 SV=3) HSP 1 Score: 158.303 bits (399), Expect = 1.278e-47 Identity = 90/180 (50.00%), Postives = 117/180 (65.00%), Query Frame = 1 Query: 112 PNLECRMYEARYPEVDMAVMIQVKNIADMGAYVSLLEYNNIEGMILFSEXXXXXXXXXXXXXKVGRIEPVMVLRVDKEKGYIDLSKRRVSEEDIQACEERYNKSKLVHSIMRHVAETLGI----DLEELYVNIGWPLYRKYGH----AFEAFKIIVTDPDSVLNSLTREVKEIGPDGQEV 627 P L CR Y+ ++PEV+ VM+ V++IA+MGAYVSLLEYNNIEGMIL SE ++GR E V+V+RVDKEKGYIDLSKRRVS E+ CE+++ KSK V+SI+RHVAE L LE L+ W KY A++AFK V+DP S+L+SL ++ D +EV Sbjct: 2 PGLSCRFYQHKFPEVEDVVMVNVRSIAEMGAYVSLLEYNNIEGMILLSELSRRRIRSINKLIRIGRNECVVVIRVDKEKGYIDLSKRRVSPEEAIKCEDKFTKSKTVYSILRHVAEVLEYTKDEQLESLFQRTAWVFDDKYKRPGYGAYDAFKHAVSDP-SILDSL-----DLNEDEREV 175 HSP 2 Score: 53.5286 bits (127), Expect = 1.278e-47 Identity = 21/44 (47.73%), Postives = 35/44 (79.55%), Query Frame = 2 Query: 725 EEVKDALVKNIRRRMTPQPLKIRADIEMKCFQFDGVLHIKDAMR 856 E+ ++ L+ NI RR+TPQ +KIRADIE+ C+ ++G+ +K+A+R Sbjct: 170 EDEREVLINNINRRLTPQAVKIRADIEVACYGYEGIDAVKEALR 213
BLAST of FC877872 vs. ExPASy Swiss-Prot
Match: IF2A_HUMAN (Eukaryotic translation initiation factor 2 subunit 1 OS=Homo sapiens GN=EIF2S1 PE=1 SV=3) HSP 1 Score: 158.303 bits (399), Expect = 1.278e-47 Identity = 90/180 (50.00%), Postives = 117/180 (65.00%), Query Frame = 1 Query: 112 PNLECRMYEARYPEVDMAVMIQVKNIADMGAYVSLLEYNNIEGMILFSEXXXXXXXXXXXXXKVGRIEPVMVLRVDKEKGYIDLSKRRVSEEDIQACEERYNKSKLVHSIMRHVAETLGI----DLEELYVNIGWPLYRKYGH----AFEAFKIIVTDPDSVLNSLTREVKEIGPDGQEV 627 P L CR Y+ ++PEV+ VM+ V++IA+MGAYVSLLEYNNIEGMIL SE ++GR E V+V+RVDKEKGYIDLSKRRVS E+ CE+++ KSK V+SI+RHVAE L LE L+ W KY A++AFK V+DP S+L+SL ++ D +EV Sbjct: 2 PGLSCRFYQHKFPEVEDVVMVNVRSIAEMGAYVSLLEYNNIEGMILLSELSRRRIRSINKLIRIGRNECVVVIRVDKEKGYIDLSKRRVSPEEAIKCEDKFTKSKTVYSILRHVAEVLEYTKDEQLESLFQRTAWVFDDKYKRPGYGAYDAFKHAVSDP-SILDSL-----DLNEDEREV 175 HSP 2 Score: 53.5286 bits (127), Expect = 1.278e-47 Identity = 21/44 (47.73%), Postives = 35/44 (79.55%), Query Frame = 2 Query: 725 EEVKDALVKNIRRRMTPQPLKIRADIEMKCFQFDGVLHIKDAMR 856 E+ ++ L+ NI RR+TPQ +KIRADIE+ C+ ++G+ +K+A+R Sbjct: 170 EDEREVLINNINRRLTPQAVKIRADIEVACYGYEGIDAVKEALR 213
BLAST of FC877872 vs. ExPASy Swiss-Prot
Match: IF2A_BOVIN (Eukaryotic translation initiation factor 2 subunit 1 OS=Bos taurus GN=EIF2S1 PE=2 SV=2) HSP 1 Score: 158.303 bits (399), Expect = 1.278e-47 Identity = 90/180 (50.00%), Postives = 117/180 (65.00%), Query Frame = 1 Query: 112 PNLECRMYEARYPEVDMAVMIQVKNIADMGAYVSLLEYNNIEGMILFSEXXXXXXXXXXXXXKVGRIEPVMVLRVDKEKGYIDLSKRRVSEEDIQACEERYNKSKLVHSIMRHVAETLGI----DLEELYVNIGWPLYRKYGH----AFEAFKIIVTDPDSVLNSLTREVKEIGPDGQEV 627 P L CR Y+ ++PEV+ VM+ V++IA+MGAYVSLLEYNNIEGMIL SE ++GR E V+V+RVDKEKGYIDLSKRRVS E+ CE+++ KSK V+SI+RHVAE L LE L+ W KY A++AFK V+DP S+L+SL ++ D +EV Sbjct: 2 PGLSCRFYQHKFPEVEDVVMVNVRSIAEMGAYVSLLEYNNIEGMILLSELSRRRIRSINKLIRIGRNECVVVIRVDKEKGYIDLSKRRVSPEEAIKCEDKFTKSKTVYSILRHVAEVLEYTKDEQLESLFQRTAWVFDDKYKRPGYGAYDAFKHAVSDP-SILDSL-----DLNEDEREV 175 HSP 2 Score: 53.5286 bits (127), Expect = 1.278e-47 Identity = 21/44 (47.73%), Postives = 35/44 (79.55%), Query Frame = 2 Query: 725 EEVKDALVKNIRRRMTPQPLKIRADIEMKCFQFDGVLHIKDAMR 856 E+ ++ L+ NI RR+TPQ +KIRADIE+ C+ ++G+ +K+A+R Sbjct: 170 EDEREVLINNINRRLTPQAVKIRADIEVACYGYEGIDAVKEALR 213
BLAST of FC877872 vs. ExPASy Swiss-Prot
Match: IF2A_DROME (Eukaryotic translation initiation factor 2 subunit 1 OS=Drosophila melanogaster GN=eIF-2alpha PE=1 SV=1) HSP 1 Score: 159.844 bits (403), Expect = 7.360e-45 Identity = 87/172 (50.58%), Postives = 115/172 (66.86%), Query Frame = 1 Query: 118 LECRMYEARYPEVDMAVMIQVKNIADMGAYVSLLEYNNIEGMILFSEXXXXXXXXXXXXXKVGRIEPVMVLRVDKEKGYIDLSKRRVSEEDIQACEERYNKSKLVHSIMRHVAETLGID----LEELYVNIGWPLYRKYGH---AFEAFKIIVTDPDSVLN--SLTREVKEI 606 L R Y RYPE++ VM+ V +IA+MGAYV LLEYNNIEGMIL SE +VG+ EPV+V+RVDKEKGYIDLSKRRVS ED++ C ER+ K+K ++S++RHVA+ LG + LE+LY W +KY + A++ FK VTDP +V + +L E KE+ Sbjct: 3 LTSRFYNERYPEIEDVVMVNVLSIAEMGAYVHLLEYNNIEGMILLSELSRRRIRSINKLIRVGKTEPVVVIRVDKEKGYIDLSKRRVSPEDVEKCTERFAKAKAINSLLRHVADILGFEGNEKLEDLYQKTAWHFEKKYNNKTVAYDIFKQSVTDP-TVFDECNLEPETKEV 173 HSP 2 Score: 42.743 bits (99), Expect = 7.360e-45 Identity = 17/44 (38.64%), Postives = 30/44 (68.18%), Query Frame = 2 Query: 728 EVKDALVKNIRRRMTPQPLKIRADIEMKCFQFDGVLHIKDAMRK 859 E K+ L+ NI+R++ +KIRADIE C+ ++G+ +K ++ K Sbjct: 169 ETKEVLLSNIKRKLVSPTVKIRADIECSCYGYEGIDAVKASLTK 212
BLAST of FC877872 vs. ExPASy Swiss-Prot
Match: IF2A_YEAST (Eukaryotic translation initiation factor 2 subunit alpha OS=Saccharomyces cerevisiae GN=SUI2 PE=1 SV=1) HSP 1 Score: 180.259 bits (456), Expect = 1.302e-44 Identity = 89/146 (60.96%), Postives = 106/146 (72.60%), Query Frame = 1 Query: 124 CRMYEARYPEVDMAVMIQVKNIADMGAYVSLLEYNNIEGMILFSEXXXXXXXXXXXXXKVGRIEPVMVLRVDKEKGYIDLSKRRVSEEDIQACEERYNKSKLVHSIMRHVAETLGIDLEELYVNIGWPLYRKYGHAFEAFKIIVTD 561 CR YE +YPE+D VM+ V+ IA+MGAYV LLEY+NIEGMIL SE +VG+ + +VLRVDKEKGYIDLSKRRVS EDI CEE+Y KSK VHSI+R+ AE I LEELY I WPL RK+GHA+EAFK+ + D Sbjct: 6 CRFYENKYPEIDDIVMVNVQQIAEMGAYVKLLEYDNIEGMILLSELSRRRIRSIQKLIRVGKNDVAVVLRVDKEKGYIDLSKRRVSSEDIIKCEEKYQKSKTVHSILRYCAEKFQIPLEELYKTIAWPLSRKFGHAYEAFKLSIID 151
BLAST of FC877872 vs. ExPASy Swiss-Prot
Match: IF2A_DICDI (Eukaryotic translation initiation factor 2 subunit 1 OS=Dictyostelium discoideum GN=eif2s1 PE=3 SV=1) HSP 1 Score: 172.555 bits (436), Expect = 2.715e-42 Identity = 86/158 (54.43%), Postives = 111/158 (70.25%), Query Frame = 1 Query: 121 ECRMYEARYPEVDMAVMIQVKNIADMGAYVSLLEYNNIEGMILFSEXXXXXXXXXXXXXKVGRIEPVMVLRVDKEKGYIDLSKRRVSEEDIQACEERYNKSKLVHSIMRHVAETLG-----IDLEELYVNIGWPLYRKYGHAFEAFKIIVTDPDSVLN 579 +CRMYE +YPE + VM+++++I DMG YVSLLEYNNIEGMIL SE +VG+ E V+V+RVDK+KGYIDLSKRRV+ E+ CEER++KSK VH I+R+VA L + + LY WPLY KYGHA+EAFK+ +T+P SV N Sbjct: 6 DCRMYEKKYPEENELVMVRIESIGDMGVYVSLLEYNNIEGMILLSEISRRRIRSINKLVRVGKTEAVVVVRVDKDKGYIDLSKRRVTPEEYAQCEERFHKSKAVHGIVRYVATKLSTEDNVVKTKHLYTKFVWPLYTKYGHAYEAFKLSITEP-SVFN 162
BLAST of FC877872 vs. ExPASy Swiss-Prot
Match: IF2A_XENTR (Eukaryotic translation initiation factor 2 subunit 1 OS=Xenopus tropicalis GN=eif2s1 PE=2 SV=1) HSP 1 Score: 160.229 bits (404), Expect = 1.395e-38 Identity = 89/166 (53.61%), Postives = 113/166 (68.07%), Query Frame = 1 Query: 112 PNLECRMYEARYPEVDMAVMIQVKNIADMGAYVSLLEYNNIEGMILFSEXXXXXXXXXXXXXKVGRIEPVMVLRVDKEKGYIDLSKRRVSEEDIQACEERYNKSKLVHSIMRHVAETLGI----DLEELYVNIGWPL---YRKYGH-AFEAFKIIVTDPDSVLNSL 585 P L CR Y+ ++PEVD VM+ V++IA+MGAYVSLLEYNNIEGMIL SE ++GR E V+V+RVDK+KGYIDLSKRRVS E+ CE+++ KSK V+SI+RHVAE L LE LY W Y+K G+ A++AFK V+DPD VL+ L Sbjct: 2 PALSCRFYQHKFPEVDDVVMVNVRSIAEMGAYVSLLEYNNIEGMILLSELSRRRIRSINKLIRIGRNECVVVIRVDKDKGYIDLSKRRVSPEEALKCEDKFTKSKTVYSILRHVAEVLEYTKDEQLESLYQRTAWVFDEKYKKPGYGAYDAFKHAVSDPD-VLDGL 166 The following BLAST results are available for this feature:
BLAST of FC877872 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 31
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Sequences
The
following sequences are available for this feature:
EST sequence >FC877872 ID=FC877872; Name=FC877872; organism=Citrus clementina; type=EST; length=879bpback to top |