FC878069
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC878069 vs. ExPASy Swiss-Prot
Match: MFRN1_RAT (Mitoferrin-1 OS=Rattus norvegicus GN=Slc25a37 PE=2 SV=1) HSP 1 Score: 139.043 bits (349), Expect = 3.440e-32 Identity = 74/190 (38.95%), Postives = 114/190 (60.00%), Query Frame = 1 Query: 265 MISGSIAGSVEHMAMYPVDTLKTRMQVIGASRPLHPAGVRQAFSSVLKLEGPAGFYRGIAAMGLGAGPAHAVYFSVYELCKE-----FFPGGVPNNSMAHAVSGVFSTVASDAVITPMDMVKQRLQLKSSPYKGVADCVKRVLVEEGIGAFYASYRTTVIMNAPFQAVHFATYEAVKRAL---MEFDPNS 810 M +G++AG +EH MYPVD++KTRMQ + + A ++ EG RG+ M +GAGPAHA+YF+ YE K F G N+ +A+ ++G +T+ DAV+ P ++VKQRLQ+ +S ++ C++ V EG+GAFY SY T + MN PFQ++HF TYE ++ + +++P S Sbjct: 49 MTAGAMAGILEHSIMYPVDSVKTRMQSLNPDPKARYTSIYGALKRIMHTEGFWRPLRGLNVMMMGAGPAHAMYFACYENMKRTLNDVFSHQG--NSHLANGIAGSMATLLHDAVMNPAEVVKQRLQMYNSQHQSALSCIRTVWRTEGLGAFYRSYTTQLTMNIPFQSIHFITYEFLQEQVNPRRDYNPQS 236
BLAST of FC878069 vs. ExPASy Swiss-Prot
Match: MFRN1_MOUSE (Mitoferrin-1 OS=Mus musculus GN=Slc25a37 PE=1 SV=1) HSP 1 Score: 139.043 bits (349), Expect = 3.440e-32 Identity = 75/190 (39.47%), Postives = 114/190 (60.00%), Query Frame = 1 Query: 265 MISGSIAGSVEHMAMYPVDTLKTRMQVIGASRPLHPAGVRQAFSSVLKLEGPAGFYRGIAAMGLGAGPAHAVYFSVYELCKE-----FFPGGVPNNSMAHAVSGVFSTVASDAVITPMDMVKQRLQLKSSPYKGVADCVKRVLVEEGIGAFYASYRTTVIMNAPFQAVHFATYEAVKRAL---MEFDPNS 810 M +G++AG +EH MYPVD++KTRMQ + + A ++ EG RG+ M +GAGPAHA+YF+ YE K F G N+ +A+ V+G +T+ DAV+ P ++VKQRLQ+ +S ++ C++ V EG+GAFY SY T + MN PFQ++HF TYE ++ + +++P S Sbjct: 49 MTAGAMAGILEHSIMYPVDSVKTRMQSLNPDPKARYTSIYGALKRIMHTEGFWRPLRGLNVMMMGAGPAHAMYFACYENMKRTLNDVFSHQG--NSHLANGVAGSMATLLHDAVMNPAEVVKQRLQMYNSQHQSAFSCIRTVWRTEGLGAFYRSYTTQLTMNIPFQSIHFITYEFLQEQVNPRRDYNPQS 236
BLAST of FC878069 vs. ExPASy Swiss-Prot
Match: MRS4_YEAST (Mitochondrial RNA-splicing protein MRS4 OS=Saccharomyces cerevisiae GN=MRS4 PE=1 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 3.219e-30 Identity = 71/176 (40.34%), Postives = 106/176 (60.23%), Query Frame = 1 Query: 265 MISGSIAGSVEHMAMYPVDTLKTRMQVIGASRPLHPAGVRQAFSSVLKLEGPAGFYRGIAAMGLGAGPAHAVYFSVYELCKE--FFPGGVPNNS-MAHAVSGVFSTVASDAVITPMDMVKQRLQLKSSPYKGVADCVKRVLVEEGIGAFYASYRTTVIMNAPFQAVHFATYEAVKR 783 +++G+ AG +EH M+P+D LKTR+Q G ++ + Q S + +EG ++G+ ++ LGAGPAHAVYF YE CK P + + M A+SG +T+A+DA++ P D VKQRLQL ++ V + K++ EG AFY SY TT+ MN PF A +F YE+ + Sbjct: 27 LLAGAFAGIMEHSLMFPIDALKTRVQAAGLNKAASTGMISQ-ISKISTMEGSMALWKGVQSVILGAGPAHAVYFGTYEFCKARLISPEDMQTHQPMKTALSGTIATIAADALMNPFDTVKQRLQLDTN--LRVWNVTKQIYQNEGFAAFYYSYPTTLAMNIPFAAFNFMIYESASK 199
BLAST of FC878069 vs. ExPASy Swiss-Prot
Match: MRS3_YEAST (Mitochondrial RNA-splicing protein MRS3 OS=Saccharomyces cerevisiae GN=MRS3 PE=1 SV=4) HSP 1 Score: 132.109 bits (331), Expect = 4.205e-30 Identity = 77/215 (35.81%), Postives = 116/215 (53.95%), Query Frame = 1 Query: 265 MISGSIAGSVEHMAMYPVDTLKTRMQVIGASRPLHPAGVRQAFSSVLKLEGPAGFYRGIAAMGLGAGPAHAVYFSVYELCKEFFPGGVPNNSMAH-----AVSGVFSTVASDAVITPMDMVKQRLQLKSSPYKGVADCVKRVLVEEGIGAFYASYRTTVIMNAPFQAVHFATYEAVKRALMEFDPNSGSDESLVVHXXXXXXXXXXXXXXXXPLD 894 +I+G+ AG +EH M+P+D LKTR+Q A + L + S + EG ++G+ ++ LGAGPAHAVYF YE CK+ +++ H A+SG +T ASDA++ P D +KQR+QL +S V K++ EG+ AFY SY TT++MN PF A +F YE+ + L N ++ + ++H PLD Sbjct: 37 LIAGAFAGIMEHSVMFPIDALKTRIQSANA-KSLSAKNMLSQISHISTSEGTLALWKGVQSVILGAGPAHAVYFGTYEFCKKNLIDS--SDTQTHHPFKTAISGACATTASDALMNPFDTIKQRIQLNTS--ASVWQTTKQIYQSEGLAAFYYSYPTTLVMNIPFAAFNFVIYESSTKFL-----NPSNEYNPLIHCLCGSISGSTCAAITTPLD 241
BLAST of FC878069 vs. ExPASy Swiss-Prot
Match: YIA6_YEAST (Uncharacterized mitochondrial carrier YIL006W OS=Saccharomyces cerevisiae GN=YIL006W PE=1 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.958e-19 Identity = 59/181 (32.60%), Postives = 96/181 (53.04%), Query Frame = 1 Query: 268 ISGSIAGSVEHMAMYPVDTLKTRMQVIGASRPL---HPAGVRQAFSSVLKLEGPAGFYRGIAAMGLGAGPAHAVYFSVYELCKEFFPGGVPN-NSMAHAVSGVFSTVASDAVITPMDMVKQRLQLKS------SPYKGVADCVKRVLVEEGIGAFYASYRTTVIMNAPFQAVHFATYEAVK 780 +SG+ AG + +A+ P+D KTR+Q G + G+ S++++ EGP G Y+G+ + LG P +YFSVYE K+FF G P + +A + + + + AS + P+ +VK RL L+S + YKG D +++ +EG A YA ++ A+HF YE +K Sbjct: 82 LSGAFAGFLSGVAVCPLDVAKTRLQAQGLQTRFENPYYRGIMGTLSTIVRDEGPRGLYKGLVPIVLGYFPTWMIYFSVYEFSKKFFHGIFPQFDFVAQSCAAITAGAASTTLTNPIWVVKTRLMLQSNLGEHPTHYKGTFDAFRKLFYQEGFKALYAGL-VPSLLGLFHVAIHFPIYEDLK 261
BLAST of FC878069 vs. ExPASy Swiss-Prot
Match: MCFJ_DICDI (Mitochondrial substrate carrier family protein J OS=Dictyostelium discoideum GN=mcfJ PE=2 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.958e-19 Identity = 56/195 (28.72%), Postives = 93/195 (47.69%), Query Frame = 1 Query: 253 FWQFMISGSIAGSVEHMAMYPVDTLKTRMQVIGASRPLHPA----GVRQAFSSVLKLEGPAGFYRGIAAMGLGAGPAHAVYFSVYELCKEFFPGGVPNNS----MAHAVSGVFSTVASDAVITPMDMVKQRLQLKSS----PYKGVADCVKRVLVEEGIGAFYASYRTTVIMNAPFQAVHFATYEAVKRALMEFD 801 F+ F++ GSI + M+P+D ++TR+QV G+ + G F +++LEG Y+G G + A+YF YE K+ F G ++ +SG S + + P D+ Q +Q++ S YKG +D K++ E GI Y + T+I N P+ + + TYE K L +F+ Sbjct: 33 FYNFLLGGSI-----DLLMFPLDVIRTRLQVQGSQNVIQSFPQYNGTFDGFKKLIRLEGKRALYKGFLTSECGYLCSRAIYFGSYEFVKQGFLKGRSDSDSDLLFVTTISGAISEALASVIWVPFDVATQSVQIQGSLSKPKYKGGSDVFKKIYGERGIKGLYKGFGATIIRNVPYSGIWWGTYEISKSKLTQFN 222
BLAST of FC878069 vs. ExPASy Swiss-Prot
Match: YM39_YEAST (Uncharacterized mitochondrial carrier YMR166C OS=Saccharomyces cerevisiae GN=YMR166C PE=1 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 5.696e-19 Identity = 69/248 (27.82%), Postives = 111/248 (44.76%), Query Frame = 1 Query: 166 PKYRTPDFHPEISVNP-----SKTKETTIH--------DGLEFWQFMISGSIAGSVEHMAMYPVDTLKTRMQVIGASRPLHPAGVRQAFSSVLKLEGPA-GFYRGIAAMGLGAGPAHAVYFSVYELCKE-FFPGGVPNNSMAHAVSGVFSTVASDAVITPMDMVKQRLQLK---SSP-------YKGVADCVKRVLVEEGIGAFYASYRTTVIMNAPFQAVHFATYEAVKRALMEFDPNSGSDESLVV 834 P TP HP S + K+ +H D W ++SG I G + AM+ +DT+KTR Q GA + A+ ++ EG G Y G A LG+ P+ A++F YE K N+++ H +G S V P +++K RLQL+ ++P Y + + +K V+ EEG + + Y+ T+ + PF A+ FA YE ++ + + G D L + Sbjct: 11 PIIHTPHDHPPTSEGTPDQPNNNRKDDKLHKKRGDSDEDLSPIWHCVVSGGIGGKIGDSAMHSLDTVKTRQQ--GAPNVKKYRNMISAYRTIWLEEGVRRGLYGGYMAAMLGSFPSAAIFFGTYEYTKRTMIEDWQINDTITHLSAGFLGDFISSFVYVPSEVLKTRLQLQGRFNNPFFQSGYNYSNLRNAIKTVIKEEGFRSLFFGYKATLARDLPFSALQFAFYEKFRQLAFKIEQKDGRDGELSI 256
BLAST of FC878069 vs. ExPASy Swiss-Prot
Match: S2545_HUMAN (Solute carrier family 25 member 45 OS=Homo sapiens GN=SLC25A45 PE=2 SV=2) HSP 1 Score: 93.5893 bits (231), Expect = 1.657e-18 Identity = 57/187 (30.48%), Postives = 91/187 (48.66%), Query Frame = 1 Query: 253 FWQFMISGSIAGSVEHMAMYPVDTLKTRMQ------VIGASRPLHPAGVRQAFSSVLKLEGPAGFYRGIAAMGLGAGPAHAVYFSVYE-LCKEFFPGGVPNNSMAHAVSGVFSTVASDAVITPMDMVKQRLQ---LKSSPYKGVADCVKRVLVEEGIGAFYASYRTTVIMNAPFQAVHFATYEAVKR 783 + ++G G ++ + P D +K R+Q S P G +S+ + EGP G +RG A+ L P +YF YE LC+++ P G +S V+G F+ +AS TP+DM+K R+Q L+ Y+G+ DC+ + +EG+G F+ P AV F +YE + R Sbjct: 99 YMHIFLAGCTGGFLQAYCLAPFDLIKVRLQNQTEPRAQPGSPPPRYQGPVHCAASIFREEGPRGLFRGAWALTLRDTPTVGIYFITYEGLCRQYTPEGQNPSSATVLVAGGFAGIASWVAATPLDMIKSRMQMDGLRRRVYQGMLDCMVSSIRQEGLGVFFRGVTINSARAFPVNAVTFLSYEYLLR 285
BLAST of FC878069 vs. ExPASy Swiss-Prot
Match: S2545_MOUSE (Solute carrier family 25 member 45 OS=Mus musculus GN=Slc25a45 PE=2 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 2.827e-18 Identity = 61/188 (32.45%), Postives = 92/188 (48.94%), Query Frame = 1 Query: 253 FWQFMISGSIAGSVEHMAMYPVDTLKTRMQ-------VIGASRPLHPAGVRQAFSSVLKLEGPAGFYRGIAAMGLGAGPAHAVYFSVYE-LCKEFFPGGVPNNSMAHAVSGVFSTVASDAVITPMDMVKQRLQ---LKSSPYKGVADCVKRVLVEEGIGAFYASYRTTVIMNAPFQAVHFATYEAVKR 783 + I+G G ++ + P D +K R+Q I +S P + V A +S+L+ EGP G +RG A+ L P +YF YE LC+++ P G +S V+G F+ +AS TP D++K R+Q LK Y G+ DC+ +EGIG F+ P A F +YE + R Sbjct: 99 YTNIFIAGCTGGLLQAYCLAPFDLIKVRLQNQTEPRMQISSSMPRYRGPVHCA-ASILREEGPQGLFRGSWALVLRDTPTLGMYFVTYEGLCRQYTPEGQNPSSATVLVAGGFAGIASWITATPFDVIKSRMQMDGLKGRKYGGMLDCMASSFRQEGIGVFFKGMTLNSARAFPVNAATFLSYEYLLR 285
BLAST of FC878069 vs. ExPASy Swiss-Prot
Match: SCMC1_RABIT (Calcium-binding mitochondrial carrier protein SCaMC-1 OS=Oryctolagus cuniculus GN=SLC25A24 PE=1 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 6.298e-18 Identity = 57/179 (31.84%), Postives = 89/179 (49.72%), Query Frame = 1 Query: 250 EFWQFMISGSIAGSVEHMAMYPVDTLKTRMQVIGASRPLHPAGVRQAFSSVLKLEGPAGFYRGIAAMGLGAGPAHAVYFSVYELCKEFFPG-GVPNNSMAHAVSGVFSTVASDAVITPMDMVKQRLQL-KSSPYKGVADCVKRVLVEEGIGAFYASYRTTVIMNAPFQAVHFATYEAVK 780 ++W+ +++G IAG+V + P+D LK MQV G+ G RQ ++K G +RG + P AV F VYE K+ G + +SG + + I PM+++K RL + K+ Y G+ DC K++L EG GAFY Y ++ P+ + A YE +K Sbjct: 193 QWWRQLLAGGIAGAVSRTSTAPLDRLKVMMQVHGSKSMNIFGGFRQ----MIKEGGVRSLWRGNGTNVIKIAPETAVKFWVYEQYKKLLTEEGQKIGTFERFISGSMAGATAQTFIYPMEVMKTRLAVGKTGQYSGIYDCAKKILKYEGFGAFYKGYVPNLLGIIPYAGIDLAVYELLK 367 HSP 2 Score: 71.2478 bits (173), Expect = 8.808e-12 Identity = 47/183 (25.68%), Postives = 82/183 (44.81%), Query Frame = 1 Query: 268 ISGSIAGSVEHMAMYPVDTLKTRMQVIGASRPLHPAGVRQAFSSVLKLEGPAGFYRGIAAMGLGAGPAHAVYFSVYELCKEFFPGGVPNNSMAHAV-----SGVFSTVASDAVITPMDMVKQRLQ----LKSSPYKGVADCVKRVLVEEGIGAFYASYRTTVIMNAPFQAVHFATYEAVKRAL 789 ISGS+AG+ +YP++ +KTR+ V + +G+ +LK EG FY+G LG P + +VYEL K + +S+ V G S+ P+ +V+ R+Q L+ +P + +R++ +EG+ Y + P + + YE +K+ L Sbjct: 291 ISGSMAGATAQTFIYPMEVMKTRLAV---GKTGQYSGIYDCAKKILKYEGFGAFYKGYVPNLLGIIPYAGIDLAVYELLKSHWLDNFAKDSVNPGVLVLLGCGALSSTCGQLASYPLALVRTRMQAQAMLEGAPQLNMVGLFRRIISKEGLPGLYRGITPNFMKVLPAVGISYVVYENMKQTL 470 The following BLAST results are available for this feature:
BLAST of FC878069 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 164
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Sequences
The
following sequences are available for this feature:
EST sequence >FC878069 ID=FC878069; Name=FC878069; organism=Citrus clementina; type=EST; length=897bpback to top |