FC878069

Overview
NameFC878069
Unique NameFC878069
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length897
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC878069 vs. ExPASy Swiss-Prot
Match: S2533_MOUSE (Solute carrier family 25 member 33 OS=Mus musculus GN=Slc25a33 PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 3.821e-15
Identity = 58/211 (27.49%), Postives = 95/211 (45.02%), Query Frame = 1
Query:  265 MISGSIAGSVEHMAMYPVDTLKTRMQ-----------------VIGASRPLHPA----GVRQAFSSVLKLEGPAGFYRGIAAMGLGAGPAHAVYFSVYELCKEFFPG-GVPNNSMAHAVSGVFSTVASDAVITPMDMVKQRLQL----KSSPYKGVADCVKRVLVEEGIGAFYASYRTTVIMNAPFQAVHFATYEAVKRALMEFDPNSGSD 819
            + +G   G+V  +   P++ +KTR+Q                  I  +  + P     G+ Q   S+L+ EGP   +RG+    +G  P+ AVYF+ Y   KE F G  VPN++  H +S   +   ++ ++ P+ MVK R+QL    +         C +RV   EG+  FY    T          + FA YE++K+ L +    S +D
Sbjct:   15 LFAGGCGGTVGAIFTCPLEVIKTRLQSSRLALRTVYYPQVHLGTISGAGMVRPTSVTPGLLQVLKSILEKEGPKSLFRGLGPNLVGVAPSRAVYFACYSKAKEQFNGIFVPNSNTVHILSAGSAAFVTNTLMNPIWMVKTRMQLERKVRGCKQMNTLQCARRVYQTEGVRGFYRGL-TASYAGISETIICFAIYESLKKCLKDAPIVSSTD 224          
BLAST of FC878069 vs. ExPASy Swiss-Prot
Match: TPC_HUMAN (Mitochondrial thiamine pyrophosphate carrier OS=Homo sapiens GN=SLC25A19 PE=1 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 4.990e-15
Identity = 52/196 (26.53%), Postives = 93/196 (47.45%), Query Frame = 1
Query:  232 TIHDGLEFWQFMISGSIAGSVEHMAMYPVDTLKTRMQVIGASRPLHPAGVRQAFSSVLKLEGPAGFYRGIAAMGLGAGPAHAVYFSVYELCKEFFPGGVP-----NNSMAHAVSGVFSTVASDAVITPMDMVKQRLQL-----------KSSPYKGVADCVKRVLVEEGIGAFYASYRTTVIMNAPFQAVHFATYE 771
            +++D  EF    + G +A  +  + ++PVD L+TR    G  +  +   +R A  ++ + EGP  FY+G+A   +   P   + FS Y   K  +   +P     N ++ + + G  + V S  +  P+D+ K+RLQ+           +   YKG+ DC K+VL +EG   F+     +++  A      F +YE
Sbjct:  111 SVYDAREFSVHFVCGGLAACMATLTVHPVDVLRTRFAAQGEPKVYNT--LRHAVGTMYRSEGPQVFYKGLAPTLIAIFPYAGLQFSCYSSLKHLYKWAIPAEGKKNENLQNLLCGSGAGVISKTLTYPLDLFKKRLQVGGFEHARAAFGQVRRYKGLMDCAKQVLQKEGALGFFKGLSPSLLKAALSTGFMFFSYE 304          
BLAST of FC878069 vs. ExPASy Swiss-Prot
Match: TPC1_ASPFU (Mitochondrial thiamine pyrophosphate carrier 1 OS=Aspergillus fumigatus GN=tpc1 PE=3 SV=3)

HSP 1 Score: 82.0333 bits (201), Expect = 4.990e-15
Identity = 52/190 (27.37%), Postives = 93/190 (48.95%), Query Frame = 1
Query:  268 ISGSIAGSVEHMAMYPVDTLKTRMQVIGASRPLHPAGVRQAFSSVLKLEGPAGFYRGIAAMGLGAGPAHAVYFSVYELCKEFFPG--GVPNNSMAHAVSGVFSTVASDAVITPMDMVKQRLQLKS-----------SPYKGVADCVKRVLVEEGIGAFYASYRTTVIMNAPFQAVHFATYEAVKRALMEF 798
            +SG++AG +   + YP+D L+TR    G  R      +  +   + + EGPAGF+RG +A      P   ++F+ YE  +    G   +P  S   A +GV ++V + + + P+D+V++RLQ++              Y+GV   +  ++  +G+   Y     ++I  AP  A+   TYE   + L +F
Sbjct:  127 VSGAVAGGLATASTYPLDLLRTRFAAQGTERIY--TSLLASVRDIARSEGPAGFFRGCSAAVGQIVPYMGLFFATYESLRPVLSGLENMPFGS-GDAAAGVIASVLAKSGVFPLDLVRKRLQVQGPTRTLYVHRNIPEYRGVFSTIAMIVRTQGVRGLYRGLTVSLIKAAPASAITMWTYERSLKLLRDF 313          
BLAST of FC878069 vs. ExPASy Swiss-Prot
Match: MCAT_MOUSE (Mitochondrial carnitine/acylcarnitine carrier protein OS=Mus musculus GN=Slc25a20 PE=1 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 4.990e-15
Identity = 60/200 (30.00%), Postives = 94/200 (47.00%), Query Frame = 1
Query:  265 MISGSIAGSVEHMAMYPVDTLKTRMQVIGASRPLHP---AGVRQAFSSVLKLEGPAGFYRGIAAMGLGAGPAHAVYFSVYELCKEFFPGGVPNNSMAHA---VSGVFSTVASDAVITPMDMVKQRLQLKSS----PYKGVADCVKRVLVEEGIGAFYASYRTTVIMNAPFQAVHFATYEAVKRALMEFDPNSGSDESLVV 834
            +++G   G       +P+DT+K R+Q    S    P   +G    F   L  EG  G YRG+AA  +G  P  AV F  + L K+      P + +++     +G+ S V +  ++TP + +K  LQ+++S     Y G  DC K++  E GI  FY     T++ + P   ++F TYE +K     F P   S   L V
Sbjct:   14 LLAGGFGGMCLVFVGHPLDTVKVRLQTQPPSLSGQPPMYSGTLDCFRKTLMREGITGLYRGMAAPIIGVTPMFAVCFFGFGLGKKLQQKS-PEDELSYPQLFTAGMLSGVFTTGIMTPGERIKCLLQIQASSGENKYSGTLDCAKKLYQEFGIRGFYKGTVLTLMRDVPASGMYFMTYEWLKNL---FTPEGKSVSDLSV 209          
BLAST of FC878069 vs. ExPASy Swiss-Prot
Match: TPC1_BOTFB (Mitochondrial thiamine pyrophosphate carrier 1 OS=Botryotinia fuckeliana (strain B05.10) GN=tpc1 PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 6.517e-15
Identity = 60/192 (31.25%), Postives = 96/192 (50.00%), Query Frame = 1
Query:  268 ISGSIAGSVEHMAMYPVDTLKTRMQVIGASRPLHPAGVRQAFSSVLKLEGPAGFYRGIAAMGLGA-GPAHAVYFSVYELCKEFFPGGVPNNSM--AHAVSGVFSTVASDAVITPMDMVKQRLQL----------KSSP-YKGVADCVKRVLVEEGIGAFYASYRTTVIMNAPFQAVHFATYEAVKRALMEFD 801
            I+G+ AG+V   A YP+D L+TR    G  R      +R +   +   EGP GF++G+ A G+G   P   ++F+ YE  +   P G  N     A A +GV ++V +   I P D++++RLQ+          K+ P Y GV   ++ +L  EG    Y     ++  +AP  AV   TYE V   L++++
Sbjct:  129 IAGASAGAVATTATYPLDLLRTRFAAQGIERVY--TSLRSSIRDIAISEGPRGFFQGLGA-GVGQIVPYMGIFFATYESLR--LPMGTLNMPFGSADASAGVIASVIAKTGIFPFDLIRKRLQVQGPTRERYVHKNIPVYNGVFQTMRHILHNEGYRGLYRGLTVSLFKSAPASAVTMWTYERVLGILLKWE 315          
BLAST of FC878069 vs. ExPASy Swiss-Prot
Match: MCFX_DICDI (Mitochondrial substrate carrier family protein X OS=Dictyostelium discoideum GN=mcfX PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 6.517e-15
Identity = 55/188 (29.26%), Postives = 89/188 (47.34%), Query Frame = 1
Query:  247 LEFWQFMISGSIAGSVEHMAMYPVDTLKTRMQVIGASRPLHPAGVRQAFSSVLKLEGPAGFYRGIAAMGLGAGPAHAVYFSVYELCK------EFFPGGVPNNSMAHAVSGVFSTVASDAVITPMDMVKQRLQLKSSP----YKGVADCVKRVLVEEGIGAFYASYRTTVIMNAPFQAVHFATYEAVK 780
            ++ W+ + SG +AG  + +A  P++ +K RMQV G S      G + +   V+   G  G Y+G A+  L   P   +YFS+Y   K      E    G+P   +    +G  +     +V TP D++K R+Q+K  P    YKG+ADC ++ +  EG  A +      V + +P   +    YE  K
Sbjct:  117 IKLWEEVASGGLAGMCQVVATNPMELVKIRMQVSGLS------GKKASLKEVVSELGIKGLYKGTASTLLRDVPFSMIYFSIYGRMKHNLTDQETGEIGLPKILLCGITAGSIAA----SVSTPFDVIKTRIQVKPGPNDPHYKGIADCFRKTIQSEGPKALFKGVLPRVCIISPLFGITLVVYEIQK 294          

HSP 2 Score: 71.2478 bits (173), Expect = 8.808e-12
Identity = 52/183 (28.42%), Postives = 92/183 (50.27%), Query Frame = 1
Query:  265 MISGSIAGSVEHMAMYPVDTLKTRMQ----VIGASRPLHPAGVRQAFSSVLKLEGPA-GFYRGIAAMGLGAGPAHAVYFSVYELCKEFFPGGVPNNSMAHAV-SGVFSTVASDAVITPMDMVKQRLQLKSSPYKGVADCVKRVLVEEGIGAFYASYRTTVIMNAPFQAVHFATYEAVKRALME 795
            +I+G+IAG +    ++P+D +KTR+Q     I  S+  +  G+   F  V+K EG   G YRG+++  +G  P  A+  ++ +  +  F G      +   V SG  + +       PM++VK R+Q+  S   G    +K V+ E GI   Y    +T++ + PF  ++F+ Y  +K  L +
Sbjct:   24 LIAGAIAGVIGSSVVFPLDFVKTRLQQQRVSIDGSKQYN--GIIDCFKKVIKNEGGVRGLYRGLSSNLIGIIPEKALKLAMNDYFRTRFQGDRSYIKLWEEVASGGLAGMCQVVATNPMELVKIRMQV--SGLSGKKASLKEVVSELGIKGLYKGTASTLLRDVPFSMIYFSIYGRMKHNLTD 202          
BLAST of FC878069 vs. ExPASy Swiss-Prot
Match: EAAC_ARATH (Probable envelope ADP,ATP carrier protein, chloroplastic OS=Arabidopsis thaliana GN=EAAC PE=2 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 6.517e-15
Identity = 43/175 (24.57%), Postives = 85/175 (48.57%), Query Frame = 1
Query:  265 MISGSIAGSVEHMAMYPVDTLKTRMQVIGASRPLHPAGVRQAFSSVLKLEGPAGFYRGIAAMGLGAGPAHAVYFSVYELCKEFFPGGVPNNSMAHAVSGVFSTVASDAVITPMDMVKQRLQLKSSPYKGVADCVKRVLVEEGIGAFYASYRTTVIMNAPFQAVHFATYEAVKRAL 789
            + +G+ AG    +  YP+D L+ R+ V    R +      Q   S+L+ EG A FY G+    +G  P  AV F +++L K+  P      + +  ++ V S   +     P+D V++++Q++ +PYK + +    ++  +G+   Y  +    +   P  ++   T++ VKR +
Sbjct:  191 LAAGACAGMTSTLLTYPLDVLRLRLAVEPRYRTMS-----QVALSMLRDEGIASFYYGLGPSLVGIAPYIAVNFCIFDLVKKSLPEEYRKKAQSSLLTAVLSAGIATLTCYPLDTVRRQMQMRGTPYKSIPEAFAGIIDRDGLIGLYRGFLPNALKTLPNSSIRLTTFDMVKRLI 360          

HSP 2 Score: 68.5514 bits (166), Expect = 5.709e-11
Identity = 47/180 (26.11%), Postives = 87/180 (48.33%), Query Frame = 1
Query:  271 SGSIAGSVEHMAMYPVDTLKTRMQV----IGASRPLHPAGVRQAFSSVLKLEGPAGFYRGIAAMGLGAGPAHAVYFSVYELCKEFFPGGVPNNSM-AHAVSGVFSTVASDAVITPMDMVKQRLQLKSSPYKGVADCVKRVLVEEGIGAFYASYRTTVIMNAPFQAVHFATYEAVKRALME 795
            +G++AG+       P+D +K  MQ     +G        G  +A + + K EG  G+++G     +   P  AV    YE  K  F G     S+     +G  + + S  +  P+D+++ RL ++   Y+ ++     +L +EGI +FY     +++  AP+ AV+F  ++ VK++L E
Sbjct:   93 AGALAGAAAKTVTAPLDRIKLLMQTHGIRLGQQSAKKAIGFIEAITLIAKEEGVKGYWKGNLPQVIRVLPYSAVQLLAYESYKNLFKGKDDQLSVIGRLAAGACAGMTSTLLTYPLDVLRLRLAVEPR-YRTMSQVALSMLRDEGIASFYYGLGPSLVGIAPYIAVNFCIFDLVKKSLPE 271          
BLAST of FC878069 vs. ExPASy Swiss-Prot
Match: CMC1_MOUSE (Calcium-binding mitochondrial carrier protein Aralar1 OS=Mus musculus GN=Slc25a12 PE=1 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 6.517e-15
Identity = 65/212 (30.66%), Postives = 105/212 (49.53%), Query Frame = 1
Query:  181 PDFHPEISVNPSKTKETTIHDG-LEFWQFMISGSIAGSVEHMAMYPVDTLKTRMQVIGASRPLHPAGVRQAFSSVLKLEGPAGFYRGIAAMGLGAGPAHAVYFSVYELCKEFFP------GGVPNNSMAHAVSGVFSTVASDAVITPMDMVKQRLQLKS----SPYKGVADCVKRVLVEEGIGAFYASYRTTVIMNAPFQAVHFATYEAVKR 783
            P+   +++VN     + T  DG +     +++G  AG  + +   P++ +K R+QV G        G R +  +VL+  G  G Y+G  A  L   P  A+YF VY  CK          GG+ N   A A++GV     + +++TP D++K RLQ+ +    + Y GV DC +++L EEG  AF+      V  ++P   V   TYE ++R
Sbjct:  401 PEKAIKLTVNDFVRDKFTKRDGSIPLPAEILAGGCAGGSQVIFTNPLEIVKIRLQVAGEIT----TGPRVSALNVLQDLGLFGLYKGAKACFLRDIPFSAIYFPVYAHCKLLLADENGRVGGI-NLLTAGALAGV----PAASLVTPADVIKTRLQVAARAGQTTYSGVVDCFRKILREEGPSAFWKGTAARVFRSSPQFGVTLVTYELLQR 603          

HSP 2 Score: 71.633 bits (174), Expect = 6.744e-12
Identity = 53/184 (28.80%), Postives = 84/184 (45.65%), Query Frame = 1
Query:  274 GSIAGSVEHMAMYPVDTLKTRMQ-------VIGASRPLHPAGVRQAFSSVLKLEGPAGFYRGIAAMGLGAGPAHAVYFSVYELCKEFF---PGGVPNNSMAHAVSGVFSTVASDAVITPMDMVKQRLQLKSSPYKGVADCVKRVLVEEGIGAFYASYRTTVIMNAPFQAVHFATYEAVKRALME 795
            GS+AG+V   A+YP+D +KTRMQ       V+G    L        F  VL+ EG  G YRG+    +G  P  A+  +V +  ++ F    G +P    A  ++G  +  +      P+++VK RLQ+      G       VL + G+   Y   +   + + PF A++F  Y   K  L +
Sbjct:  333 GSVAGAVGATAVYPIDLVKTRMQNQRGTGSVVG---ELMYKNSFDCFKKVLRYEGFFGLYRGLIPQLIGVAPEKAIKLTVNDFVRDKFTKRDGSIP--LPAEILAGGCAGGSQVIFTNPLEIVKIRLQVAGEITTGPRVSALNVLQDLGLFGLYKGAKACFLRDIPFSAIYFPVYAHCKLLLAD 511          
BLAST of FC878069 vs. ExPASy Swiss-Prot
Match: YD1K_SCHPO (Uncharacterized mitochondrial carrier C4G9.20c OS=Schizosaccharomyces pombe GN=SPAC4G9.20c PE=2 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 8.512e-15
Identity = 52/184 (28.26%), Postives = 87/184 (47.28%), Query Frame = 1
Query:  253 FWQFMISGSIAGSVEHMAMYPVDTLKTRMQVIGASRPLHPAGVRQAFSSVLKLEGPAGFYRGIAAMGLGAGPAHAVYFSVYELCKEFFP-GGVPNNSMAHAVSGVFSTVASDAVITPMDMVKQRLQL---KSSPYKGVADCVKRVLVEEGIGAFYASYRTTVIMNAPFQAVHFATYEAVKRALM 792
            F +  ++G   G  + +   P D +K R+Q      P++   +      + K EG A FY+G     LG G   ++ F+ +E CK FF   G P     + VSG  S +A+  ++ P++ V+ RLQ+   K+  Y G  DC+K++  + G+      Y  T    A    ++F  YEA+ +  M
Sbjct:   17 FTKDFLAGVSGGVAQVLVGQPFDCVKVRLQSQSNVSPIYNNAL-DCVKKISKNEGLAAFYKGTVLPLLGIGFCVSIQFTTFEYCKRFFSRDGTPVTMPQYYVSGAISGLANSFLVGPVEHVRIRLQIQTGKNVLYHGPWDCIKKISSQYGLSGIMKGYNPTAAREAHGLGMYFLAYEALVKNTM 199          
BLAST of FC878069 vs. ExPASy Swiss-Prot
Match: TPC1_NEOFI (Mitochondrial thiamine pyrophosphate carrier 1 OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=tpc1 PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 8.512e-15
Identity = 52/190 (27.37%), Postives = 92/190 (48.42%), Query Frame = 1
Query:  268 ISGSIAGSVEHMAMYPVDTLKTRMQVIGASRPLHPAGVRQAFSSVLKLEGPAGFYRGIAAMGLGAGPAHAVYFSVYELCKEFFPG--GVPNNSMAHAVSGVFSTVASDAVITPMDMVKQRLQLKS-----------SPYKGVADCVKRVLVEEGIGAFYASYRTTVIMNAPFQAVHFATYEAVKRALMEF 798
            +SG++AG +   + YP+D L+TR    G  R      +  +   + + EGPAGF+RG +A      P   ++F+ YE  +    G   +P  S   A +GV ++V +   + P+D+V++RLQ++              Y+GV   +  ++  +G+   Y     ++I  AP  A+   TYE   + L +F
Sbjct:  127 VSGAVAGGLATASTYPLDLLRTRFAAQGTERIY--TSLLASVQDIARNEGPAGFFRGCSAAVGQIVPYMGLFFATYESLRPVLSGLENMPFGS-GDAAAGVIASVLAKTGVFPLDLVRKRLQVQGPTRTLYVHRNIPEYRGVFSTIAMIVRTQGVRGLYRGLTVSLIKAAPASAITMWTYERSLKLLHDF 313          
The following BLAST results are available for this feature:
BLAST of FC878069 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 164
Match NameE-valueIdentityDescription
S2533_MOUSE3.821e-1527.49Solute carrier family 25 member 33 OS=Mus musculus... [more]
TPC_HUMAN4.990e-1526.53Mitochondrial thiamine pyrophosphate carrier OS=Ho... [more]
TPC1_ASPFU4.990e-1527.37Mitochondrial thiamine pyrophosphate carrier 1 OS=... [more]
MCAT_MOUSE4.990e-1530.00Mitochondrial carnitine/acylcarnitine carrier prot... [more]
TPC1_BOTFB6.517e-1531.25Mitochondrial thiamine pyrophosphate carrier 1 OS=... [more]
MCFX_DICDI6.517e-1529.26Mitochondrial substrate carrier family protein X O... [more]
EAAC_ARATH6.517e-1524.57Probable envelope ADP,ATP carrier protein, chlorop... [more]
CMC1_MOUSE6.517e-1530.66Calcium-binding mitochondrial carrier protein Aral... [more]
YD1K_SCHPO8.512e-1528.26Uncharacterized mitochondrial carrier C4G9.20c OS=... [more]
TPC1_NEOFI8.512e-1527.37Mitochondrial thiamine pyrophosphate carrier 1 OS=... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA69AF09RM1 IVIA1 Citrus clementina cDNA clone IC0AAA69AF09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC878069 ID=FC878069; Name=FC878069; organism=Citrus clementina; type=EST; length=897bp
TAAAATTATCAGCCAAAAATAATTCAGTGCATGGCGACAAAGTCACCTCC
ATTCGACCCGAAAACGATCTCCAATCACCAAATCCTCCACTCCTATTAAA
CCTTAACAGCACAAGCAACTTCTCGTTATACAAACTTCACCAGTACTATG
GCTACTGACGCCTCCCCCAAATATCGGACCCCCGATTTCCACCCCGAAAT
CTCGGTAAACCCCTCCAAAACAAAAGAAACAACAATACACGACGGCCTCG
AGTTCTGGCAGTTCATGATTTCCGGGTCCATCGCGGGCTCCGTTGAGCAC
ATGGCCATGTACCCAGTTGACACCCTCAAGACCCGCATGCAAGTCATAGG
GGCGTCTCGCCCGCTTCATCCCGCCGGCGTCCGTCAAGCCTTTAGCTCAG
TGCTCAAGCTGGAGGGCCCGGCAGGGTTTTACCGAGGAATTGCAGCTATG
GGACTCGGCGCAGGACCCGCACACGCTGTTTACTTCTCGGTTTACGAGCT
CTGTAAAGAGTTCTTCCCAGGTGGGGTCCCTAATAACTCAATGGCTCACG
CTGTGTCGGGTGTCTTCTCGACGGTGGCGAGTGATGCTGTGATTACGCCC
ATGGATATGGTGAAGCAGAGGCTTCAGCTCAAGAGCAGTCCGTACAAGGG
AGTCGCAGACTGTGTCAAGAGAGTGTTAGTTGAGGAAGGAATCGGCGCGT
TTTACGCTTCATATAGGACTACGGTGATCATGAACGCGCCGTTTCAAGCA
GTTCATTTCGCCACTTATGAGGCAGTAAAGAGAGCTTTGATGGAATTTGA
CCCAAACAGTGGGAGTGATGAGAGTTTAGTGGTTCATGCAACAGCCGGTG
CGGCTGCCGGAGCTCTGGCCGCTACCTTGACGACGCCACTTGATGTT
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