FC878130
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC878130 vs. ExPASy Swiss-Prot
Match: OTC_METAC (Ornithine carbamoyltransferase OS=Methanosarcina acetivorans GN=argF PE=3 SV=1) HSP 1 Score: 166.777 bits (421), Expect = 1.302e-40 Identity = 86/183 (46.99%), Postives = 118/183 (64.48%), Query Frame = 1 Query: 259 DFLHISDFDKATIMKILDRAAEVKALLKSGDRSFLPFKGKTMSMIFAKPSMRTRVSFETGFSLLGGHAIYLGPDDIQMGKREETRDAARVLCRYNDIIMARVFGHQDILDLAKFATVPVINGLTDYNHPCQIMADALTIIEHVGRLEGTKVVYVGDGNNVVHSWLLMASVIPFHFVCACPKGF 807 D L I+D K I ++L+ AA++KA K+G+ + K K++ MIF K S RTRVSFE + GGHA+YL DIQ+G+ E D AR L Y +MARV H + LAK++T+PVIN L+D HPCQI+ D +TI+E + EG K +VGDGNNV +S LL ++++ F ACPKG+ Sbjct: 4 DVLSITDLSKEEIYELLESAADLKAKRKAGESTEY-LKNKSLGMIFEKSSTRTRVSFEVAMTDFGGHALYLNSRDIQVGRGETIEDTARTLSGYLHGLMARVMSHDTVEKLAKYSTMPVINALSDREHPCQILGDFMTIMEFKKKFEGLKFAWVGDGNNVCNSALLGSAIMGMEFAVACPKGY 185
BLAST of FC878130 vs. ExPASy Swiss-Prot
Match: OTC_THICR (Ornithine carbamoyltransferase OS=Thiomicrospira crunogena (strain XCL-2) GN=argF PE=3 SV=1) HSP 1 Score: 166.007 bits (419), Expect = 2.221e-40 Identity = 84/182 (46.15%), Postives = 117/182 (64.29%), Query Frame = 1 Query: 262 FLHISDFDKATIMKILDRAAEVKALLKSGDRSFLPFKGKTMSMIFAKPSMRTRVSFETGFSLLGGHAIYLGPDDIQMGKREETRDAARVLCRYNDIIMARVFGHQDILDLAKFATVPVINGLTDYNHPCQIMADALTIIEHVGRLEGTKVVYVGDGNNVVHSWLLMASVIPFHFVCACPKGF 807 FL + DF A + +++ RA E+K + KSG+ F P K KT++MIF K S RTR+SFE G S LGGHA++L P D Q+G+ E D A+V+ D IM R FGH+ + +A+ + VPVIN LTD HPCQ++AD T EH G +EG V++VGDGNN+ HS++ A F + P+ + Sbjct: 6 FLTLQDFSPAELKQLMLRAIELKKIQKSGE-IFEPLKNKTLAMIFEKSSTRTRISFEIGMSQLGGHALFLSPRDTQLGRGEPIEDTAKVISSMADGIMIRTFGHEVVEKMAEHSQVPVINALTDDYHPCQLLADMQTYYEHRGSIEGKTVLWVGDGNNMCHSYINAAKQYGFKLRISAPEDY 186
BLAST of FC878130 vs. ExPASy Swiss-Prot
Match: OTC_BACHD (Ornithine carbamoyltransferase OS=Bacillus halodurans GN=argF PE=3 SV=1) HSP 1 Score: 166.007 bits (419), Expect = 2.221e-40 Identity = 86/184 (46.74%), Postives = 117/184 (63.59%), Query Frame = 1 Query: 259 DFLHISDFDKATIMKILDRAAEVKALLKSGDRSFLPF-KGKTMSMIFAKPSMRTRVSFETGFSLLGGHAIYLGPDDIQMGKREETRDAARVLCRYNDIIMARVFGHQDILDLAKFATVPVINGLTDYNHPCQIMADALTIIEHVGRLEGTKVVYVGDGNNVVHSWLLMASVIPFHFVCACPKGF 807 D L + D+ + ++L +A E+K K+G+ + P+ GK++ MIF S RTRVSFE G + LGGHA++L P D+Q+G+ E +D A VL RY D IM R H+ + +LA +ATVPVIN LTD HPCQ +ADALTI+E L G K+ Y+GDGNNV HS L + + A PKG+ Sbjct: 15 DLLTLLDYTPEEVQQLLTQALELKQKAKNGEPT--PYLTGKSLGMIFENASTRTRVSFEVGMTQLGGHALFLSPKDLQIGRGEPIKDTANVLSRYVDAIMIRTNSHESVEELAHYATVPVINALTDAYHPCQALADALTILEKKETLIGKKLAYIGDGNNVCHSLLAIGAKTGMDVTVATPKGY 196
BLAST of FC878130 vs. ExPASy Swiss-Prot
Match: OTC_CAMFF (Ornithine carbamoyltransferase OS=Campylobacter fetus subsp. fetus (strain 82-40) GN=argF PE=3 SV=1) HSP 1 Score: 165.236 bits (417), Expect = 3.788e-40 Identity = 90/183 (49.18%), Postives = 122/183 (66.67%), Query Frame = 1 Query: 262 FLHISDFDKATIMKILDRAAEVKALLKSGDRSFLPF-KGKTMSMIFAKPSMRTRVSFETGFSLLGGHAIYLGPDDIQMGKREETRDAARVLCRYNDIIMARVFGHQDILDLAKFATVPVINGLTDYNHPCQIMADALTIIEHVGRLEGTKVVYVGDGNNVVHSWLLMASVIPFHFVCACPKGF 807 FL ++D DK I+ IL A ++K KS R+++ + K +T++MIF K S RTRVSFE G LGG ++L DIQ+G+ E +D ARVL R D+IMARV+ D+ +LAKF+ VPVINGL+D HP Q+M+D LT+ E L+ KV YVGDGNN+ +SWL+ AS + F A PKG+ Sbjct: 4 FLTLNDLDKNEILDILSLAKDIKKEAKS--RNYISYLKDQTLAMIFEKSSTRTRVSFEVGIHQLGGKGLFLSSRDIQLGRGEPVKDTARVLGRMVDMIMARVYKQSDLEELAKFSGVPVINGLSDDFHPVQLMSDLLTLSELGLNLQTMKVAYVGDGNNMTNSWLMAASKLGFELRVATPKGY 184
BLAST of FC878130 vs. ExPASy Swiss-Prot
Match: OTC_METS3 (Ornithine carbamoyltransferase OS=Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM 861) GN=argF PE=3 SV=1) HSP 1 Score: 164.851 bits (416), Expect = 4.947e-40 Identity = 85/184 (46.20%), Postives = 119/184 (64.67%), Query Frame = 1 Query: 256 TDFLHISDFDKATIMKILDRAAEVKALLKSGDRSFLPFKGKTMSMIFAKPSMRTRVSFETGFSLLGGHAIYLGPDDIQMGKREETRDAARVLCRYNDIIMARVFGHQDILDLAKFATVPVINGLTDYNHPCQIMADALTIIEHVGRLEGTKVVYVGDGNNVVHSWLLMASVIPFHFVCACPKGF 807 ++ L + D K ++ IL+ A K G P GK+++MIF K S RTRVSF+ G LGG A++L ++QMG+ E D A+VL R+ D IM R H D+++LAK++ VPVI+GLT+ HPCQ +AD LTI EH+G+LEG K+ +VGDGNNV +S LLMA ++ ACP+G+ Sbjct: 2 SNLLSVCDI-KDEVLDILELAKN----FKEGKMEEKPLAGKSLAMIFQKSSTRTRVSFDVGMYQLGGQALFLSSSELQMGRGEPIPDTAKVLSRFVDGIMIRAIEHDDVVELAKYSDVPVISGLTNLEHPCQALADMLTIQEHLGKLEGKKLCFVGDGNNVCNSLLLMAPLVGMDMSVACPEGY 180
BLAST of FC878130 vs. ExPASy Swiss-Prot
Match: OTC_PSYCK (Ornithine carbamoyltransferase OS=Psychrobacter cryohalolentis (strain K5) GN=argF PE=3 SV=1) HSP 1 Score: 164.466 bits (415), Expect = 6.461e-40 Identity = 82/182 (45.05%), Postives = 116/182 (63.74%), Query Frame = 1 Query: 262 FLHISDFDKATIMKILDRAAEVKALLKSGDRSFLPFKGKTMSMIFAKPSMRTRVSFETGFSLLGGHAIYLGPDDIQMGKREETRDAARVLCRYNDIIMARVFGHQDILDLAKFATVPVINGLTDYNHPCQIMADALTIIEHVGRLEGTKVVYVGDGNNVVHSWLLMASVIPFHFVCACPKGF 807 FL +SD K + ++ RA+E++ + +G+ + PF G+T+ MIF K S RTR+SFETG GG AI+L P+D Q+G+ E D+ARV+ DIIM R FGH+ + AK+++VP+IN LTD HPCQ++AD T EH G +E V +VGDGNN+ S++ A+ F A P GF Sbjct: 6 FLTLSDLTKQELENLIKRASELRHMQHAGE-IYQPFVGRTLGMIFEKSSTRTRISFETGMGQFGGSAIFLSPNDTQLGRGEPIEDSARVISSMVDIIMIRTFGHEKVETFAKYSSVPIINALTDEFHPCQLLADMQTYYEHRGSIENKIVTWVGDGNNMCASYMQAANQFGFELRVAAPYGF 186
BLAST of FC878130 vs. ExPASy Swiss-Prot
Match: PTC_STRRT (Putrescine carbamoyltransferase OS=Streptococcus ratti GN=ptcA PE=3 SV=2) HSP 1 Score: 163.696 bits (413), Expect = 1.102e-39 Identity = 87/189 (46.03%), Postives = 123/189 (65.08%), Query Frame = 1 Query: 250 EQTDFLHISDFDKATIMKILDRAAEVKALLKSGDRSFLPFKGKTMSMIFAKPSMRTRVSFETGFSLLGGHAIYLGPDDIQMGKREETRDAARVLCRYNDIIMARVFGHQDILDLAKFATVPVINGLTDYNHPCQIMADALTIIEHV---GRLEGTKVVYVGDGNNVVHSWLLMASVIPFHFVCACPKGF 807 ++TD++ DF K ++K++D + ++KA +K+G L + K++ MIF + S RTRVSFET S LGGHA YL P IQ+G E D + VL R +DI+MARV HQ ++DLA+ A++PVING++DYNHP Q + D T+IEH+ +LE KVV+VGD V S L+ + + FV PKGF Sbjct: 3 KKTDYITTEDFSKEELLKLVDLSLKIKACIKNGYYPPL-LEHKSLGMIFQQTSTRTRVSFETAMSQLGGHAQYLAPGQIQLGGHETIEDTSTVLSRLDDILMARVERHQSVVDLARCASIPVINGMSDYNHPTQELGDLCTMIEHLPAGKKLEDCKVVFVGDATQVCFSLALITTKMGMEFVHFGPKGF 190
BLAST of FC878130 vs. ExPASy Swiss-Prot
Match: PTC_STRMU (Putrescine carbamoyltransferase OS=Streptococcus mutans GN=ptcA PE=1 SV=1) HSP 1 Score: 163.696 bits (413), Expect = 1.102e-39 Identity = 87/189 (46.03%), Postives = 123/189 (65.08%), Query Frame = 1 Query: 250 EQTDFLHISDFDKATIMKILDRAAEVKALLKSGDRSFLPFKGKTMSMIFAKPSMRTRVSFETGFSLLGGHAIYLGPDDIQMGKREETRDAARVLCRYNDIIMARVFGHQDILDLAKFATVPVINGLTDYNHPCQIMADALTIIEHV---GRLEGTKVVYVGDGNNVVHSWLLMASVIPFHFVCACPKGF 807 ++TD++ DF K ++K++D + ++KA +K+G L + K++ MIF + S RTRVSFET S LGGHA YL P IQ+G E D + VL R +DI+MARV HQ ++DLA+ A++PVING++DYNHP Q + D T+IEH+ +LE KVV+VGD V S L+ + + FV PKGF Sbjct: 3 KKTDYITTEDFSKEELLKLVDLSLKIKACIKNGYYPPL-LEHKSLGMIFQQTSTRTRVSFETAMSQLGGHAQYLAPGQIQLGGHETIEDTSTVLSRLDDILMARVERHQSVVDLARCASIPVINGMSDYNHPTQELGDLCTMIEHLPAGKKLEDCKVVFVGDATQVCFSLALITTKMGMEFVHFGPKGF 190
BLAST of FC878130 vs. ExPASy Swiss-Prot
Match: OTC_WOLSU (Ornithine carbamoyltransferase OS=Wolinella succinogenes GN=argF PE=3 SV=1) HSP 1 Score: 163.696 bits (413), Expect = 1.102e-39 Identity = 87/182 (47.80%), Postives = 119/182 (65.38%), Query Frame = 1 Query: 262 FLHISDFDKATIMKILDRAAEVKALLKSGDRSFLPFKGKTMSMIFAKPSMRTRVSFETGFSLLGGHAIYLGPDDIQMGKREETRDAARVLCRYNDIIMARVFGHQDILDLAKFATVPVINGLTDYNHPCQIMADALTIIEHVGRLEGTKVVYVGDGNNVVHSWLLMASVIPFHFVCACPKGF 807 FL + DF I++IL + E+K LK G R L +GK + MIF K S RTRVSFE+G LGG ++L DIQ+G+ E +D ARV+ R D++M R GH+ I + AK++ VPV+NGLTD HP Q+MAD LT++E G+ + V YVGDGNN+ HSWL++AS + F A P+G+ Sbjct: 4 FLTLKDFSAQEILEILALSKEIKDDLKKGIRPPL-MQGKVLGMIFEKSSTRTRVSFESGIYQLGGMGMFLSNRDIQLGRGEPMKDTARVISRMVDMVMIRTSGHERIEEFAKYSQVPVVNGLTDSYHPVQLMADYLTMMEQ-GKDQNPIVAYVGDGNNMTHSWLMLASKLGFELRVATPRGY 183
BLAST of FC878130 vs. ExPASy Swiss-Prot
Match: OTC_ACIAD (Ornithine carbamoyltransferase OS=Acinetobacter sp. (strain ADP1) GN=argF PE=3 SV=1) HSP 1 Score: 163.696 bits (413), Expect = 1.102e-39 Identity = 82/182 (45.05%), Postives = 114/182 (62.64%), Query Frame = 1 Query: 262 FLHISDFDKATIMKILDRAAEVKALLKSGDRSFLPFKGKTMSMIFAKPSMRTRVSFETGFSLLGGHAIYLGPDDIQMGKREETRDAARVLCRYNDIIMARVFGHQDILDLAKFATVPVINGLTDYNHPCQIMADALTIIEHVGRLEGTKVVYVGDGNNVVHSWLLMASVIPFHFVCACPKGF 807 FL + D + ILDRA+E+K + ++ + PFKGK + MIF K S RTR+SFE G GG AI+L P D Q+G+ E D+ARV+ DI+M R FGH + A F+ VPVINGLTD +HPCQ++AD T EH G ++G V ++GDGNN+ +S++ A ++ F PKG+ Sbjct: 6 FLTLRDLSSLELNSILDRASELKRQ-QHANQVYQPFKGKVLGMIFEKSSTRTRISFEAGICQFGGSAIFLSPRDTQLGRGEPIEDSARVISSMLDIVMIRTFGHNIVERFASFSKVPVINGLTDDHHPCQLLADLQTYQEHRGSIKGKTVAWIGDGNNMCNSYMEAAHMMGFKLKVGSPKGY 186 The following BLAST results are available for this feature:
BLAST of FC878130 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC878130 ID=FC878130; Name=FC878130; organism=Citrus clementina; type=EST; length=809bpback to top |