FC878130
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC878130 vs. ExPASy Swiss-Prot
Match: PYRB_HALWD (Aspartate carbamoyltransferase OS=Haloquadratum walsbyi (strain DSM 16790) GN=pyrB PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.829e-11 Identity = 53/160 (33.12%), Postives = 75/160 (46.88%), Query Frame = 1 Query: 253 QTDFLHISDFDKATIMKILDRAAEVKALLKSGDRSFLPFKGKTMSMIFAKPSMRTRVSFETGFSLLGGHAIYLGP-DDIQMGKREETRDAARVLCRYNDIIMARVFGHQDILDLAKFATVPVIN-GLTDYNHPCQIMADALTIIEHVGRLEGTKVVYVGD 726 Q L + + I ILDRAA ++ + D + G + + F +PS RTR+SF+ LGG I +G D+ + K E D RV+ Y D I+ R A+F +PVIN G HP Q + D T+ E+VG L+ V GD Sbjct: 3 QDHLLSTTQLSREDIETILDRAAAIEM---NPDGWEAQYSGTVLGLCFFEPSTRTRMSFDAAMKRLGGRTIDMGSVDNSSISKGETLADTVRVIAGYADAIVLRHPSEGAAKLAAEFVDIPVINAGDGAGQHPTQTLLDLYTMRENVG-LDEITVGIAGD 158
BLAST of FC878130 vs. ExPASy Swiss-Prot
Match: PYRB_COREF (Aspartate carbamoyltransferase OS=Corynebacterium efficiens GN=pyrB PE=3 SV=2) HSP 1 Score: 69.3218 bits (168), Expect = 2.829e-11 Identity = 54/176 (30.68%), Postives = 85/176 (48.30%), Query Frame = 1 Query: 265 LHISDFDKATIMKILDRAAEVKALLKSGDRSFLP-FKGKTMSMIFAKPSMRTRVSFETGFSLLGGHAIYLGPDDIQMGKREETRDAARVLCRYN-DIIMARVFGHQDILDLAKFATV-----PVIN-GLTDYNHPCQIMADALTIIEHVGRLEGTKVVYVGDGNNVVHSWLLMASV 768 L I+D + I+ +LD A K +L+ + LP +G+T+ +F + S RTR SFET + I + + K E +D L D I+ R LA + VIN G + HP Q + DALT+ + +G +EG K+V VGD ++HS ++ ++V Sbjct: 5 LSIADLSRDEIISLLDEADRFKEVLEGREVKKLPTLRGRTIFTLFYENSTRTRSSFETAGKWMSADVINISASSSSVKKGESLKDTGLTLSAIGADAIIMRHPSSGAAQQLAGYVAPGGVGPSVINAGDGSHQHPTQALLDALTLRQRLGGIEGRKIVIVGD---ILHSRVVRSNV 177
BLAST of FC878130 vs. ExPASy Swiss-Prot
Match: PYRB_AERS4 (Aspartate carbamoyltransferase OS=Aeromonas salmonicida (strain A449) GN=pyrB PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.829e-11 Identity = 57/182 (31.32%), Postives = 85/182 (46.70%), Query Frame = 1 Query: 265 LHISDFDKATIMKILDRAAEVKALLKSGDRSFLPFKGKTMSMIFAKPSMRTRVSFETGFSLLGGHAIYLGPDDIQMGKREET-RDAARVLCRYNDIIMARVFGHQDILDLAKFATVPVINGLTDYN-HPCQIMADALTIIEHVGRLEGTKVVYVGD--GNNVVHSWLLMASVIPFHFVCACP 798 + ISD + + ++ A +KA D L K K ++ F + S RTR+SFET LGG+ I K+ ET D+ +++ Y+D ++ R ++F+ VPVING N HP Q + D +I E G+L+G V +VGD VHS S+ F P Sbjct: 11 ISISDLTRPDMELVVATAQRLKA---EPDTRLL--KDKLIASCFFEASTRTRLSFETAVQRLGGNIIGFADGGNTSAKKGETLADSIKIIGSYSDAVVMRHPKEGAARLASEFSRVPVINGGDGSNQHPTQTLLDLFSIHETQGKLDGLNVAFVGDLKYGRTVHSLAQALSLFNCRFFFISP 187
BLAST of FC878130 vs. ExPASy Swiss-Prot
Match: PYRB_AERHH (Aspartate carbamoyltransferase OS=Aeromonas hydrophila subsp. hydrophila (strain ATCC 7966 / NCIB 9240) GN=pyrB PE=3 SV=2) HSP 1 Score: 69.3218 bits (168), Expect = 2.829e-11 Identity = 57/183 (31.15%), Postives = 85/183 (46.45%), Query Frame = 1 Query: 265 LHISDFDKATIMKILDRAAEVKALLKSGDRSFLPFKGKTMSMIFAKPSMRTRVSFETGFSLLGGHAIYLGPDDIQMGKREET-RDAARVLCRYNDIIMARVFGHQDILDLAKFATVPVINGLTDYN-HPCQIMADALTIIEHVGRLEGTKVVYVGD--GNNVVHSWLLMASVIPFHFVCACPK 801 + ISD + + ++ A +KA D L K K ++ F + S RTR+SFET LGG+ I K+ ET D+ +++ Y D ++ R ++F+ VPVING N HP Q + D +I E G+L+G V +VGD VHS S+ F P+ Sbjct: 11 ISISDLTRPDMELVVATAQRLKA---EPDTRLL--KDKLVASCFFEASTRTRLSFETAVQRLGGNIIGFADGGNTSAKKGETLADSIKIIGSYTDAVVMRHPKEGAARLASEFSRVPVINGGDGSNQHPTQTLLDLFSIHETQGKLDGLNVAFVGDLKYGRTVHSLAQALSLFNCRFFFISPE 188
BLAST of FC878130 vs. ExPASy Swiss-Prot
Match: PYRB_PYRKO (Aspartate carbamoyltransferase OS=Pyrococcus kodakaraensis GN=pyrB PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 3.694e-11 Identity = 55/181 (30.39%), Postives = 89/181 (49.17%), Query Frame = 1 Query: 259 DFLHISDFDKATIMKILDRAAEVKALLKSGDRSFLPF-KGKTMSMIFAKPSMRTRVSFETGFSLLGGHAI-YLGPDDIQMGKREETRDAARVLCRYNDIIMARVFGHQDILDLAKFATVPVIN-GLTDYNHPCQIMADALTIIEHVGRLEGTKVVYVGD--GNNVVHSWLLMASVIPFHFV 786 D + I DF K I +L A ++ L ++ L + +GK ++ +F +PS RTR+SFE+ LGG I + + K E D + + +Y+D+I+ R A+ A +PVIN G HP Q + D TI + G+++G + +GD VHS +A + F+ V Sbjct: 7 DVISIRDFSKEDIEFVLKVAERLEEELN--EKGSLDYARGKILATLFFEPSTRTRLSFESAMHRLGGSVIGFSSASSTSVKKGESLADTIKTVEQYSDVIVIRHPMEGAARLAAEVAGIPVINAGDGSNQHPTQTLLDLYTIKKAFGKIDGLTIGLLGDLKYGRTVHS---LAEALAFYDV 182
BLAST of FC878130 vs. ExPASy Swiss-Prot
Match: PYRB_NATTJ (Aspartate carbamoyltransferase OS=Natranaerobius thermophilus (strain ATCC BAA-1301 / DSM 18059 / JW/NM-WN-LF) GN=pyrB PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 3.694e-11 Identity = 51/176 (28.98%), Postives = 81/176 (46.02%), Query Frame = 1 Query: 250 EQTDFLHISDFDKATIMKILDRAAEVKALLKSGDRSFLPFKGKTMSMIFAKPSMRTRVSFETGFSLLGGHAIYLGPDDIQMGKREETRDAARVL--CRYNDIIMARVFGHQDILDLAKFATVPVINGLTDYN-HPCQIMADALTIIEHVGRLEGTKVVYVGDGNNVVHSWLLMASV 768 ++ L + D +K+ I ILD +K +++ ++ KG +M +F +PS RTR SFE LG + + K E D + L N I+M L LA + +IN Y+ HP Q + D TI E+ G L+G KV +GD + HS + +++ Sbjct: 4 QRKSLLGLKDMEKSEIESILDSTESMKEIVQRKNKKLPTLKGFSMVNLFYEPSTRTRSSFEMAGKYLGADTTNMSASASSVAKGENLIDTGKTLEAMGINLIVMRHPLAGAPRL-LANNLSCSIINAGDGYHEHPTQALLDMFTIKEYKGSLKGLKVTIIGD---IYHSRVARSNI 175
BLAST of FC878130 vs. ExPASy Swiss-Prot
Match: PYRB_DESAP (Aspartate carbamoyltransferase OS=Desulforudis audaxviator (strain MP104C) GN=pyrB PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 3.694e-11 Identity = 54/185 (29.19%), Postives = 84/185 (45.41%), Query Frame = 1 Query: 265 LHISDFDKATIMKILDRAAEVKALLKSGDRSFLPFKGKTMSMIFAKPSMRTRVSFETGFSLLGGHAIYLGPDDIQMGKREETRDAARVLCRYN-DIIMAR--VFGHQDILDLAKFATVPVIN-GLTDYNHPCQIMADALTIIEHVGRLEGTKVVYVGDGNNVVHS-------WLLMASVIPFHFV 786 L ++D A I + L+ A +K ++ + +GKT+ +F +PS RTR+SFE L + + K E D AR + D+++ R G + LA+ VPV+N G + HP Q + D T+ E LEG K+V +GD ++HS W L + H V Sbjct: 7 LGLADMPAAEINEFLENALPMKQIISRDIKKVPTLRGKTVVTLFYEPSTRTRMSFELAAKYLSADTVNVSASASSATKGESLADTARTIAALGADLVVLRHPCAGAPHL--LARMIDVPVVNAGDGMHEHPTQALLDLFTLREKRPDLEGLKLVIIGD---ILHSRVARSNIWALTRFGVDVHLV 186
BLAST of FC878130 vs. ExPASy Swiss-Prot
Match: PYRB_ROSS1 (Aspartate carbamoyltransferase OS=Roseiflexus sp. (strain RS-1) GN=pyrB PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 4.825e-11 Identity = 52/173 (30.06%), Postives = 81/173 (46.82%), Query Frame = 1 Query: 235 GKPKAEQTDFLHISDFDKATIMKILDRAAEVKALLKSGDRSFLPFKGKTMSMIFAKPSMRTRVSFETGFSLLGGHAIYLGPDDIQMGKREETRDAARVLCRYN-DIIMARVFGHQDILDLAKFATVPVIN-GLTDYNHPCQIMADALTIIEHVGRLEGTKVVYVGDGNNVVHS 747 GK + + L + DF I +IL+ A +K +L + +GKT+ +F + S RTR+SFE L + + + K E D R L D+++ R A++ VIN G + HP Q + D T+ + +GR+EG KVV VGD ++HS Sbjct: 8 GKRRDRRRHVLDLDDFSTQEIEEILETAVSMKEVLGRAIKQVPTLRGKTIVNMFFEESTRTRISFELAGKALSANVVNFTARGSSVEKGESLIDTVRTLQALGADMLVMRHSESGAPYLAAQYFHGSVINAGDGRHAHPTQALLDLFTVRQRLGRIEGLKVVIVGD---ILHS 177
BLAST of FC878130 vs. ExPASy Swiss-Prot
Match: PYRB_RHOE4 (Aspartate carbamoyltransferase OS=Rhodococcus erythropolis (strain PR4 / NBRC 100887) GN=pyrB PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 4.825e-11 Identity = 56/189 (29.63%), Postives = 87/189 (46.03%), Query Frame = 1 Query: 265 LHISDFDKATIMKILDRAAEVK-ALLKSGDRSFLPFKGKTMSMIFAKPSMRTRVSFETGFSLLGGHAIYLGPDDIQMGKREETRDAARVL-CRYNDIIMARVFGHQDILDLAKFATV------PVIN-GLTDYNHPCQIMADALTIIEHVGRLEGTKVVYVGD--GNNVVHSWLLMASVIPFHFVCACP 798 L I+D D+ + +++LD A + ALL R +G+T+ +F + S RTRVSFE + I + + K E RD A L D ++ R +AK+ VIN G + HP Q + DALT+ + +G +EG ++ VGD + V S L+ S++ V P Sbjct: 5 LSIADLDRESAVELLDEAERFEQALLGREVRKLPTLRGRTVMTVFFENSTRTRVSFEVAGKWMSADVINVSASSSSVSKGESLRDTAMTLRAAGADALIVRHPASGAAHQIAKWTGAADDGGPAVINAGDGTHEHPTQALLDALTLRQRLGDIEGKRIAIVGDILHSRVARSNALLLSMLGAEVVLVAP 193
BLAST of FC878130 vs. ExPASy Swiss-Prot
Match: PYRB_LEPBP (Aspartate carbamoyltransferase OS=Leptospira biflexa serovar Patoc (strain Patoc 1 / ATCC 23582 / Paris) GN=pyrB PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 4.825e-11 Identity = 54/187 (28.88%), Postives = 87/187 (46.52%), Query Frame = 1 Query: 259 DFLHISDFDKATIMKILDRAAEVKALLKSGDRSFLPFKGKTMSMIFAKPSMRTRVSFETGFSLLGGHAI-YLGPDDIQMGKREETRDAARVLCRYNDIIMAR--VFGHQDILDLAKFATVPVIN-GLTDYNHPCQIMADALTIIEHVGRLEGTKVVYVGD--GNNVVHSWLLMASVIPFHFVCACPK 801 + L F K + ++ + + AL +SG ++F GK ++ +F + S RTR+SFE LGG I +G + K E D +++ Y DI + R V G I A +PVIN G HP Q + D TI+ G+++G + ++GD +HS + + P H P+ Sbjct: 8 NILDTLQFSKDDLNYLITKTNRMNALHESG-KAFGILHGKLLASLFFEASTRTRMSFEAAMERLGGRLISTVGFQFSSISKGETLYDTMKMIEAYCDIAVIRHPVEGSSRI--AAGAVNIPVINAGDGAGQHPTQALLDLYTIVSEKGKIDGLNIAFIGDLKYGRTIHSLINLLRHYPVHLYLISPE 191 The following BLAST results are available for this feature:
BLAST of FC878130 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC878130 ID=FC878130; Name=FC878130; organism=Citrus clementina; type=EST; length=809bpback to top |