FC919323
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC919323 vs. ExPASy Swiss-Prot
Match: NCED3_ARATH (9-cis-epoxycarotenoid dioxygenase NCED3, chloroplastic OS=Arabidopsis thaliana GN=NCED3 PE=2 SV=1) HSP 1 Score: 215.698 bits (548), Expect = 1.123e-55 Identity = 99/121 (81.82%), Postives = 108/121 (89.26%), Query Frame = -3 Query: 6 VSQERQHPLPKTADPTVQIAGNFSPVPEKPVCQNLPTTGKVPDCIQGVYVRNGANPLHEPVAGHHFFDGDGMVHAVKFNKGSVSYSCRFTETNRFAQERSLGRPVFPKAIGELHGHTGIAR 368 VS E+ HPLPKTADP+VQIAGNF+PV E+PV +NLP GK+PD I+GVYVRNGANPLHEPV GHHFFDGDGMVHAVKF GS SY+CRFT+TNRF QER LGRPVFPKAIGELHGHTGIAR Sbjct: 105 VSHEKLHPLPKTADPSVQIAGNFAPVNEQPVRRNLPVVGKLPDSIKGVYVRNGANPLHEPVTGHHFFDGDGMVHAVKFEHGSASYACRFTQTNRFVQERQLGRPVFPKAIGELHGHTGIAR 225
BLAST of FC919323 vs. ExPASy Swiss-Prot
Match: NCED1_PHAVU (9-cis-epoxycarotenoid dioxygenase NCED1, chloroplastic OS=Phaseolus vulgaris GN=NCED1 PE=2 SV=1) HSP 1 Score: 215.698 bits (548), Expect = 1.123e-55 Identity = 102/143 (71.33%), Postives = 110/143 (76.92%), Query Frame = -3 Query: 6 PSKWNFXXXXXXXXXXXXXXXLVSQERQHPLPKTADPTVQIAGNFSPVPEKPVCQNLPTTGKVPDCIQGVYVRNGANPLHEPVAGHHFFDGDGMVHAVKFNKGSVSYSCRFTETNRFAQERSLGRPVFPKAIGELHGHTGIAR 434 P KWNF LVS E +HPLPKTADP VQIAGNF+PVPE Q LP GK+P CI GVYVRNGANPL+EPVAGHHFFDGDGMVHAVKF G+ SY+CRFTET R AQE+SLGRPVFPKAIGELHGH+GIAR Sbjct: 102 PQKWNFLQKAAATGLDMVETALVSHESKHPLPKTADPKVQIAGNFAPVPEHAADQALPVVGKIPKCIDGVYVRNGANPLYEPVAGHHFFDGDGMVHAVKFTNGAASYACRFTETQRLAQEKSLGRPVFPKAIGELHGHSGIAR 244
BLAST of FC919323 vs. ExPASy Swiss-Prot
Match: NCED9_ARATH (9-cis-epoxycarotenoid dioxygenase NCED9, chloroplastic OS=Arabidopsis thaliana GN=NCED9 PE=2 SV=1) HSP 1 Score: 210.69 bits (535), Expect = 3.611e-54 Identity = 95/119 (79.83%), Postives = 104/119 (87.39%), Query Frame = -3 Query: 6 QERQHPLPKTADPTVQIAGNFSPVPEKPVCQNLPTTGKVPDCIQGVYVRNGANPLHEPVAGHHFFDGDGMVHAVKFNKGSVSYSCRFTETNRFAQERSLGRPVFPKAIGELHGHTGIAR 362 + R+HP PKTADP VQIAGNF PVPEKPV NLP TG VP+CIQGVYVRNGANPLH+PV+GHH FDGDGMVHAV+F+ GSVSY+CRFTETNR QER GRPVFPKAIGELHGH GIA+ Sbjct: 167 ERRRHPHPKTADPAVQIAGNFFPVPEKPVVHNLPVTGTVPECIQGVYVRNGANPLHKPVSGHHLFDGDGMVHAVRFDNGSVSYACRFTETNRLVQERECGRPVFPKAIGELHGHLGIAK 285
BLAST of FC919323 vs. ExPASy Swiss-Prot
Match: NCED2_ARATH (9-cis-epoxycarotenoid dioxygenase NCED2, chloroplastic OS=Arabidopsis thaliana GN=NCED2 PE=2 SV=1) HSP 1 Score: 192.971 bits (489), Expect = 7.793e-49 Identity = 87/121 (71.90%), Postives = 98/121 (80.99%), Query Frame = -3 Query: 6 VSQERQHPLPKTADPTVQIAGNFSPVPEKPVCQNLPTTGKVPDCIQGVYVRNGANPLHEPVAGHHFFDGDGMVHAVKFNKGSVSYSCRFTETNRFAQERSLGRPVFPKAIGELHGHTGIAR 368 +S E+ PLPKTADP VQIAGN+SPVPE V +NL G +PDCI GVY+RNGANP+ EP AGHH FDGDGMVHAVK GS SY+CRFT+T R QE+ LGRPVFPKAIGELHGH+GIAR Sbjct: 88 ISHEQDSPLPKTADPRVQIAGNYSPVPESSVRRNLTVEGTIPDCIDGVYIRNGANPMFEPTAGHHLFDGDGMVHAVKITNGSASYACRFTKTERLVQEKRLGRPVFPKAIGELHGHSGIAR 208
BLAST of FC919323 vs. ExPASy Swiss-Prot
Match: NCED5_ARATH (Probable 9-cis-epoxycarotenoid dioxygenase NCED5, chloroplastic OS=Arabidopsis thaliana GN=NCED5 PE=1 SV=1) HSP 1 Score: 186.422 bits (472), Expect = 7.294e-47 Identity = 87/142 (61.27%), Postives = 101/142 (71.13%), Query Frame = -3 Query: 6 SKWNFXXXXXXXXXXXXXXXLVSQERQHPLPKTADPTVQIAGNFSPVPEKPVCQNLPTTGKVPDCIQGVYVRNGANPLHEPVAGHHFFDGDGMVHAVKFNKGSVSYSCRFTETNRFAQERSLGRPVFPKAIGELHGHTGIAR 431 S+WN L+ +ER PLPKT DP QI+GN++PVPE+ V +L GK+PDCI GVY+RNGANPL EPV+GHH FDGDGMVHAVK G SYSCRFTET R QE+ LG P+FPKAIGELHGH+GIAR Sbjct: 74 SRWNPLQRAASAALDFAETALLRRERSKPLPKTVDPRHQISGNYAPVPEQSVKSSLSVDGKIPDCIDGVYLRNGANPLFEPVSGHHLFDGDGMVHAVKITNGDASYSCRFTETERLVQEKQLGSPIFPKAIGELHGHSGIAR 215
BLAST of FC919323 vs. ExPASy Swiss-Prot
Match: NCED1_MAIZE (9-cis-epoxycarotenoid dioxygenase 1, chloroplastic OS=Zea mays GN=VP14 PE=1 SV=2) HSP 1 Score: 175.637 bits (444), Expect = 1.287e-43 Identity = 81/119 (68.07%), Postives = 94/119 (78.99%), Query Frame = -3 Query: 6 ERQHPLPKTADPTVQIAGNFSPVPEKPVCQNLPTTGKVPDCIQGVYVRNGANPLHEPVAGHHFFDGDGMVHAVKFNKGSV-SYSCRFTETNRFAQERSLGRPVFPKAIGELHGHTGIAR 359 ER H LP TADP VQIAGNF+PV E+P LP +G++P I GVY RNGANP +PVAGHH FDGDGMVHA++ G+ SY+CRFTET R QER++GRPVFPKAIGELHGH+GIAR Sbjct: 108 ERPHGLPSTADPAVQIAGNFAPVGERPPVHELPVSGRIPPFIDGVYARNGANPCFDPVAGHHLFDGDGMVHALRIRNGAAESYACRFTETARLRQERAIGRPVFPKAIGELHGHSGIAR 226
BLAST of FC919323 vs. ExPASy Swiss-Prot
Match: NCED6_ARATH (9-cis-epoxycarotenoid dioxygenase NCED6, chloroplastic OS=Arabidopsis thaliana GN=NCED6 PE=2 SV=1) HSP 1 Score: 164.851 bits (416), Expect = 2.273e-40 Identity = 73/122 (59.84%), Postives = 91/122 (74.59%), Query Frame = -3 Query: 6 VSQERQHPLPKTADPTVQIAGNFSPVPEKPVCQNLPTTGKVPDCIQGVYVRNGANPLHEPVAGHHFFDGDGMVHAVKFN-KGSVSYSCRFTETNRFAQERSLGRPVFPKAIGELHGHTGIAR 368 + E+ PLPK DP VQ++GNF+PV E PV L G++P C++GVY+RNGANP+ P+AGHH FDGDGM+HAV VSYSCR+T+TNR QE +LGR VFPK IGELHGH+G+AR Sbjct: 83 IPMEQNRPLPKPTDPAVQLSGNFAPVNECPVQNGLEVVGQIPSCLKGVYIRNGANPMFPPLAGHHLFDGDGMIHAVSIGFDNQVSYSCRYTKTNRLVQETALGRSVFPKPIGELHGHSGLAR 204
BLAST of FC919323 vs. ExPASy Swiss-Prot
Match: CCD1_PHAVU (Carotenoid 9,10(9',10')-cleavage dioxygenase 1 OS=Phaseolus vulgaris GN=CCD1 PE=1 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 1.636e-22 Identity = 50/105 (47.62%), Postives = 65/105 (61.90%), Query Frame = -3 Query: 12 PTVQIAGNFSPVPEKPVCQNLPTTGKVPDCIQGVYVRNGANPLHEPVAGHHFFDGDGMVHAVKFNKGSVSYSCRFTETNRFAQERSLGRPVFPKAIGELHGHTGI 326 P + GNF PV E P ++LP G +PDC+ G +VR G NP PVAG+H+FDGDGM+H ++ G +Y RF ET+R QE GR F K IG+L G G+ Sbjct: 47 PHHYLTGNFGPVTETPPTKDLPVKGHLPDCLNGEFVRVGPNPKFAPVAGYHWFDGDGMIHGLRIKDGKATYVSRFVETSRLKQEEYFGRSKFMK-IGDLKGLFGL 150
BLAST of FC919323 vs. ExPASy Swiss-Prot
Match: CCD_CROSA (Carotenoid 9,10(9',10')-cleavage dioxygenase OS=Crocus sativus GN=CCD PE=1 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 8.978e-21 Identity = 47/106 (44.34%), Postives = 67/106 (63.21%), Query Frame = -3 Query: 12 PTVQIAGNFSPV-PEKPVCQNLPTTGKVPDCIQGVYVRNGANPLHEPVAGHHFFDGDGMVHAVKFNKGSVSYSCRFTETNRFAQERSLGRPVFPKAIGELHGHTGI 326 P ++GNF+PV E P C +LP G +P+C+ G +VR G NP PVAG+H+FDGDGM+H ++ G +Y+ R+ +T+R QE P F K IG+L G G+ Sbjct: 48 PCHYLSGNFAPVVDETPPCPDLPVRGHLPECLNGEFVRVGPNPKFMPVAGYHWFDGDGMIHGMRIKDGKATYASRYVKTSRLKQEEYFEGPKFMK-IGDLKGFFGL 152
BLAST of FC919323 vs. ExPASy Swiss-Prot
Match: CCD1_PEA (Carotenoid 9,10(9',10')-cleavage dioxygenase 1 OS=Pisum sativum GN=CCD1 PE=2 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 1.693e-19 Identity = 47/102 (46.08%), Postives = 64/102 (62.75%), Query Frame = -3 Query: 12 IAGNFSPVP-EKPVCQNLPTTGKVPDCIQGVYVRNGANPLHEPVAGHHFFDGDGMVHAVKFNKGSVSYSCRFTETNRFAQERSLGRPVFPKAIGELHGHTGI 314 ++GNF+PV E P ++L G +PDC+ G +VR G NP PVAG+H+FDGDGM+H ++ G SY RF +T+RF QE F K IG+L G G+ Sbjct: 48 LSGNFAPVKDETPPVKDLTVQGHLPDCLNGEFVRVGPNPKFSPVAGYHWFDGDGMIHGLRIKDGKASYVSRFVKTSRFKQEEYFNGSKFMK-IGDLKGLFGL 148 The following BLAST results are available for this feature:
BLAST of FC919323 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 12 ZOOMx 1POSITION0
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Sequences
The
following sequences are available for this feature:
EST sequence >FC919323 ID=FC919323; Name=FC919323; organism=Citrus clementina; type=EST; length=538bpback to top |