FC919329
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC919329 vs. ExPASy Swiss-Prot
Match: YI31B_YEAST (Transposon Ty3-I Gag-Pol polyprotein OS=Saccharomyces cerevisiae GN=TY3B-I PE=3 SV=2) HSP 1 Score: 148.673 bits (374), Expect = 2.412e-35 Identity = 85/203 (41.87%), Postives = 118/203 (58.13%), Query Frame = -1 Query: 6 KDEINDLVNKGL----IVKSRSPWSCAAFYVNKNSEIERGTPRLVINYKPLNKSLKWIRYPIPNKNDLLQKLHSAFIFSKFDMKSGFWQIQIHPKDRYKTAFTVPFGQYEWTVMPFGLKNAPSEFQRIMNDIYNPYSDFCIVYIDDVLIFSKSIDQHFKHLKTFYFATRKAGLAISNSKVSLFQTKIRFLGHHISKGTITPIE 602 + EIN +V K L IV S+SP S V K GT RL ++Y+ LNK+ +P+P ++LL ++ +A IF+ D+ SG+ QI + PKDRYKTAF P G+YE+TVMPFGL NAPS F R M D + F VY+DD+LIFS+S ++H+KHL T + L + K + FLG+ I I P++ Sbjct: 635 EQEINKIVQKLLDNKFIVPSKSPCSSPVVLVPKKD----GTFRLCVDYRTLNKATISDPFPLPRIDNLLSRIGNAQIFTTLDLHSGYHQIPMEPKDRYKTAFVTPSGKYEYTVMPFGLVNAPSTFARYMADTFRDLR-FVNVYLDDILIFSESPEEHWKHLDTVLERLKNENLIVKKKKCKFASEETEFLGYSIGIQKIAPLQ 832
BLAST of FC919329 vs. ExPASy Swiss-Prot
Match: YG31B_YEAST (Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae GN=TY3B-G PE=1 SV=3) HSP 1 Score: 148.673 bits (374), Expect = 2.412e-35 Identity = 85/203 (41.87%), Postives = 118/203 (58.13%), Query Frame = -1 Query: 6 KDEINDLVNKGL----IVKSRSPWSCAAFYVNKNSEIERGTPRLVINYKPLNKSLKWIRYPIPNKNDLLQKLHSAFIFSKFDMKSGFWQIQIHPKDRYKTAFTVPFGQYEWTVMPFGLKNAPSEFQRIMNDIYNPYSDFCIVYIDDVLIFSKSIDQHFKHLKTFYFATRKAGLAISNSKVSLFQTKIRFLGHHISKGTITPIE 602 + EIN +V K L IV S+SP S V K GT RL ++Y+ LNK+ +P+P ++LL ++ +A IF+ D+ SG+ QI + PKDRYKTAF P G+YE+TVMPFGL NAPS F R M D + F VY+DD+LIFS+S ++H+KHL T + L + K + FLG+ I I P++ Sbjct: 609 EQEINKIVQKLLDNKFIVPSKSPCSSPVVLVPKKD----GTFRLCVDYRTLNKATISDPFPLPRIDNLLSRIGNAQIFTTLDLHSGYHQIPMEPKDRYKTAFVTPSGKYEYTVMPFGLVNAPSTFARYMADTFRDLR-FVNVYLDDILIFSESPEEHWKHLDTVLERLKNENLIVKKKKCKFASEETEFLGYSIGIQKIAPLQ 806
BLAST of FC919329 vs. ExPASy Swiss-Prot
Match: POL3_DROME (Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogaster GN=pol PE=4 SV=1) HSP 1 Score: 147.902 bits (372), Expect = 4.115e-35 Identity = 77/203 (37.93%), Postives = 120/203 (59.11%), Query Frame = -1 Query: 12 EKHCKDEINDLVNKGLIVKSRSPWSCAAFYVNKNSEIE-RGTPRLVINYKPLNKSLKWIRYPIPNKNDLLQKLHSAFIFSKFDMKSGFWQIQIHPKDRYKTAFTVPFGQYEWTVMPFGLKNAPSEFQRIMNDIYNP-YSDFCIVYIDDVLIFSKSIDQHFKHLKTFYFATRKAGLAISNSKVSLFQTKIRFLGHHISKGTITP 614 E+ + +I D++N+G+I S SP++ + V K + + R+VI+Y+ LN+ R+PIPN +++L KL F+ D+ GF QI++ P+ KTAF+ G YE+ MPFGLKNAP+ FQR MNDI P + C+VY+DD+++FS S+D+H + L + KA L + K + + FLGH ++ I P Sbjct: 220 EQEVESQIQDMLNQGIIRTSNSPYNSPIWVVPKKQDASGKQKFRIVIDYRKLNEITVGDRHPIPNMDEILGKLGRCNYFTTIDLAKGFHQIEMDPESVSKTAFSTKHGHYEYLRMPFGLKNAPATFQRCMNDILRPLLNKHCLVYLDDIIVFSTSLDEHLQSLGLVFEKLAKANLKLQLDKCEFLKQETTFLGHVLTPDGIKP 422
BLAST of FC919329 vs. ExPASy Swiss-Prot
Match: RTF21_SCHPO (Retrotransposable element Tf2 155 kDa protein type 1 OS=Schizosaccharomyces pombe GN=Tf2-1 PE=2 SV=1) HSP 1 Score: 145.591 bits (366), Expect = 2.042e-34 Identity = 76/199 (38.19%), Postives = 120/199 (60.30%), Query Frame = -1 Query: 6 DEINDLVNKGLIVKSRSPWSCAAFYVNKNSEIERGTPRLVINYKPLNKSLKWIRYPIPNKNDLLQKLHSAFIFSKFDMKSGFWQIQIHPKDRYKTAFTVPFGQYEWTVMPFGLKNAPSEFQRIMNDIYNPYSDFCIV-YIDDVLIFSKSIDQHFKHLKTFYFATRKAGLAISNSKVSLFQTKIRFLGHHISKGTITPIE 599 DEIN + G+I +S++ +C +V K + GT R+V++YKPLNK +K YP+P LL K+ + IF+K D+KS + I++ D +K AF P G +E+ VMP+G+ AP+ FQ +N I + +V Y+DD+LI SKS +H KH+K + A L I+ +K Q++++F+G+HIS+ TP + Sbjct: 430 DEINQGLKSGIIRESKAINACPVMFVPK----KEGTLRMVVDYKPLNKYVKPNIYPLPLIEQLLAKIQGSTIFTKLDLKSAYHLIRVRKGDEHKLAFRCPRGVFEYLVMPYGISTAPAHFQYFINTILGEAKESHVVCYMDDILIHSKSESEHVKHVKDVLQKLKNANLIINQAKCEFHQSQVKFIGYHISEKGFTPCQ 624
BLAST of FC919329 vs. ExPASy Swiss-Prot
Match: POL_CYLCV (Enzymatic polyprotein OS=Cestrum yellow leaf curling virus GN=ORF V PE=3 SV=1) HSP 1 Score: 144.821 bits (364), Expect = 3.484e-34 Identity = 75/187 (40.11%), Postives = 112/187 (59.89%), Query Frame = -1 Query: 42 EINDLVNKGLIVKSRSPWSCAAFYVNKNSEIERGTPRLVINYKPLNKSLKWIRYPIPNKNDLLQKLHSAFIFSKFDMKSGFWQIQIHPKDRYKTAFTV-PFGQYEWTVMPFGLKNAPSEFQRIMNDIYNPYSDFCIVYIDDVLIFSKSI-DQHFKHLKTFYFATRKAGLAISNSKVSLFQTKIRFLG 596 E DLV KG+I +S+SP S AFYV ++EI+R R+VINYK LNK+ + +P + +L K+ + FS D KSG+WQ+++HP+ + TAF+ P Y+W V+PFGLK AP +Q M+ +FC+ YIDD+L+F+ S ++H L ++ GL +S K + + I FLG Sbjct: 221 ECADLVRKGIIEESKSPHSAPAFYVENHNEIKRKKRRMVINYKALNKATIGNAHKLPRIDSILTKVKGSNWFSTLDAKSGYWQLRLHPQSKPLTAFSCPPQKHYQWNVLPFGLKQAPGIYQNFMDKNLEGLENFCLAYIDDILVFTNSSREEHLSKLLVVLERCKEKGLILSKKKAIIARQTIDFLG 407
BLAST of FC919329 vs. ExPASy Swiss-Prot
Match: RTF23_SCHPO (Retrotransposable element Tf2 155 kDa protein type 3 OS=Schizosaccharomyces pombe GN=Tf2-11 PE=4 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 1.324e-33 Identity = 75/199 (37.69%), Postives = 120/199 (60.30%), Query Frame = -1 Query: 6 DEINDLVNKGLIVKSRSPWSCAAFYVNKNSEIERGTPRLVINYKPLNKSLKWIRYPIPNKNDLLQKLHSAFIFSKFDMKSGFWQIQIHPKDRYKTAFTVPFGQYEWTVMPFGLKNAPSEFQRIMNDIYNPYSDFCIV-YIDDVLIFSKSIDQHFKHLKTFYFATRKAGLAISNSKVSLFQTKIRFLGHHISKGTITPIE 599 DEIN + G+I +S++ +C +V K + GT R+V++YKPLNK +K YP+P LL K+ + IF+K D+KS + I++ D +K AF P G +E+ VMP+G+ AP+ FQ +N I + +V Y+D++LI SKS +H KH+K + A L I+ +K Q++++F+G+HIS+ TP + Sbjct: 430 DEINQGLKSGIIRESKAINACPVMFVPK----KEGTLRMVVDYKPLNKYVKPNIYPLPLIEQLLAKIQGSTIFTKLDLKSAYHLIRVRKGDEHKLAFRCPRGVFEYLVMPYGISIAPAHFQYFINTILGEVKESHVVCYMDNILIHSKSESEHVKHVKDVLQKLKNANLIINQAKCEFHQSQVKFIGYHISEKGFTPCQ 624
BLAST of FC919329 vs. ExPASy Swiss-Prot
Match: RTF22_SCHPO (Retrotransposable element Tf2 155 kDa protein type 2 OS=Schizosaccharomyces pombe GN=Tf2-7 PE=2 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 1.324e-33 Identity = 75/199 (37.69%), Postives = 120/199 (60.30%), Query Frame = -1 Query: 6 DEINDLVNKGLIVKSRSPWSCAAFYVNKNSEIERGTPRLVINYKPLNKSLKWIRYPIPNKNDLLQKLHSAFIFSKFDMKSGFWQIQIHPKDRYKTAFTVPFGQYEWTVMPFGLKNAPSEFQRIMNDIYNPYSDFCIV-YIDDVLIFSKSIDQHFKHLKTFYFATRKAGLAISNSKVSLFQTKIRFLGHHISKGTITPIE 599 DEIN + G+I +S++ +C +V K + GT R+V++YKPLNK +K YP+P LL K+ + IF+K D+KS + I++ D +K AF P G +E+ VMP+G+ AP+ FQ +N I + +V Y+D++LI SKS +H KH+K + A L I+ +K Q++++F+G+HIS+ TP + Sbjct: 430 DEINQGLKSGIIRESKAINACPVMFVPK----KEGTLRMVVDYKPLNKYVKPNIYPLPLIEQLLAKIQGSTIFTKLDLKSAYHLIRVRKGDEHKLAFRCPRGVFEYLVMPYGISIAPAHFQYFINTILGEVKESHVVCYMDNILIHSKSESEHVKHVKDVLQKLKNANLIINQAKCEFHQSQVKFIGYHISEKGFTPCQ 624
BLAST of FC919329 vs. ExPASy Swiss-Prot
Match: POL_COYMV (Putative polyprotein OS=Commelina yellow mottle virus PE=4 SV=2) HSP 1 Score: 141.354 bits (355), Expect = 3.852e-33 Identity = 76/192 (39.58%), Postives = 115/192 (59.90%), Query Frame = -1 Query: 42 EINDLVNKGLIVKSRSPWSCAAFYVNKNSEIE-------RGTPRLVINYKPLNKSLKWIRYPIPNKNDLLQKLHSAFIFSKFDMKSGFWQIQIHPKDRYKTAFTVPFGQYEWTVMPFGLKNAPSEFQRIMNDIYNPYSDFCIVYIDDVLIFSKSIDQHFKHLKTFYFATRKAGLAISNSKVSLFQTKIRFLG 596 +IN L+ +I S S AF V +EI+ +G R+V NYK LN++ + +Y +P N ++ K+ + I+SKFD+KSGFWQ+ + + TAF YEW VMPFGLKNAP+ FQR M++++ F VYIDD+L+FS++ +QH +HL T ++ GL +S +K+ + +I FLG Sbjct: 1421 QINLLLQMKVIRPSESKHRSTAFIVRSGTEIDPITGKEKKGKERMVFNYKLLNENTESDQYSLPGINTIISKVGRSKIYSKFDLKSGFWQVAMEEESVPWTAFLAGNKLYEWLVMPFGLKNAPAIFQRKMDNVFKGTEKFIAVYIDDILVFSETAEQHSQHLYTMLQLCKENGLILSPTKMKIGTPEIDFLG 1612
BLAST of FC919329 vs. ExPASy Swiss-Prot
Match: POL2_DROME (Retrovirus-related Pol polyprotein from transposon 297 OS=Drosophila melanogaster GN=pol PE=4 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 4.258e-32 Identity = 72/203 (35.47%), Postives = 117/203 (57.64%), Query Frame = -1 Query: 12 EKHCKDEINDLVNKGLIVKSRSPWSCAAFYVNKNSEIERGTP-RLVINYKPLNKSLKWIRYPIPNKNDLLQKLHSAFIFSKFDMKSGFWQIQIHPKDRYKTAFTVPFGQYEWTVMPFGLKNAPSEFQRIMNDIYNP-YSDFCIVYIDDVLIFSKSIDQHFKHLKTFYFATRKAGLAISNSKVSLFQTKIRFLGHHISKGTITP 614 E ++++ +++N+GLI +S SP++ + V K + R+VI+Y+ LN+ RYPIPN +++L KL F+ D+ GF QI++ + KTAF+ G YE+ MPFGL+NAP+ FQR MN+I P + C+VY+DD++IFS S+ +H ++ + A L + K + + FLGH ++ I P Sbjct: 219 EIEVENQVQEMLNQGLIRESNSPYNSPTWVVPKKPDASGANKYRVVIDYRKLNEITIPDRYPIPNMDEILGKLGKCQYFTTIDLAKGFHQIEMDEESISKTAFSTKSGHYEYLRMPFGLRNAPATFQRCMNNILRPLLNKHCLVYLDDIIIFSTSLTEHLNSIQLVFTKLADANLKLQLDKCEFLKKEANFLGHIVTPDGIKP 421
BLAST of FC919329 vs. ExPASy Swiss-Prot
Match: POLY_DROME (Retrovirus-related Pol polyprotein from transposon gypsy OS=Drosophila melanogaster GN=pol PE=4 SV=1) HSP 1 Score: 133.265 bits (334), Expect = 1.049e-30 Identity = 73/202 (36.14%), Postives = 114/202 (56.44%), Query Frame = -1 Query: 27 MDLEKHCKDEINDLVNKGLIVKSRSPWSCAAFYVNKNSEIERGTP--RLVINYKPLNKSLKWIRYPIPNKNDLLQKLHSAFIFSKFDMKSGFWQIQIHPKDRYKTAFTVPFGQYEWTVMPFGLKNAPSEFQRIMNDIY-NPYSDFCIVYIDDVLIFSKSIDQHFKHLKTFYFATRKAGLAISNSKVSLFQTKIRFLGHHISK 623 M + +E+ L+ G+I SRSP++ + V+K G P RLVI+++ LN+ RYP+P+ +L L A F+ D+KSG+ QI + DR KT+F+V G+YE+ +PFGL+NA S FQR ++D+ C VY+DDV+IFS++ H +H+ T A + +S K F+ + +LG +SK Sbjct: 191 MGVSDFVNNEVKQLLKDGIIRPSRSPYNSPTWVVDKKGTDAFGNPNKRLVIDFRKLNEKTIPDRYPMPSIPMILANLGKAKFFTTLDLKSGYHQIYLAEHDREKTSFSVNGGKYEFCRLPFGLRNASSIFQRALDDVLREQIGKICYVYVDDVIIFSENESDHVRHIDTVLKCLIDANMRVSQEKTRFFKESVEYLGFIVSK 392 The following BLAST results are available for this feature:
BLAST of FC919329 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 42
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Sequences
The
following sequences are available for this feature:
EST sequence >FC919329 ID=FC919329; Name=FC919329; organism=Citrus clementina; type=EST; length=638bpback to top |