FC919329
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC919329 vs. ExPASy Swiss-Prot
Match: POLG_PVCV2 (Genome polyprotein OS=Petunia vein clearing virus (isolate Hohn) PE=3 SV=1) HSP 1 Score: 192.971 bits (489), Expect = 1.115e-48 Identity = 97/195 (49.74%), Postives = 127/195 (65.13%), Query Frame = -1 Query: 12 EINDLVNKGLIVKSRSPWSCAAFYVNKNSEIERGTPRLVINYKPLNKSLKWIRYPIPNKNDLLQKLHSAFIFSKFDMKSGFWQIQIHPKDRYKTAFTVPFGQYEWTVMPFGLKNAPSEFQRIMNDIYNPYSDFCIVYIDDVLIFSKSIDQHFKHLKTFYFATRKAGLAISNSKVSLFQTKIRFLGHHISKGTITP 596 E ++L LI S S W+C AFYVNK SE RG RLVINY+PLN L+ ++PIPNK L L A +FSKFD+KSGFWQ+ IHP +R KT F +P ++W VMPFGLK APS FQ+ M I+ P +VYIDD+L+FS++++ H K L F +K G+ +S K+ L Q KI+FLG + GT +P Sbjct: 1405 ECDELQQFDLIEPSDSQWACEAFYVNKRSEQVRGKLRLVINYQPLNHFLQDDKFPIPNKLTLFSHLSKAKLFSKFDLKSGFWQLGIHPNERPKTGFCIPDRHFQWKVMPFGLKTAPSLFQKAMIKIFQPILFSALVYIDDILLFSETLEDHIKLLNQFISLVKKFGVMLSAKKMILAQNKIQFLGMDFADGTFSP 1599
BLAST of FC919329 vs. ExPASy Swiss-Prot
Match: POLG_PVCV1 (Genome polyprotein OS=Petunia vein clearing virus (isolate Shepherd) PE=3 SV=1) HSP 1 Score: 192.971 bits (489), Expect = 1.115e-48 Identity = 97/195 (49.74%), Postives = 127/195 (65.13%), Query Frame = -1 Query: 12 EINDLVNKGLIVKSRSPWSCAAFYVNKNSEIERGTPRLVINYKPLNKSLKWIRYPIPNKNDLLQKLHSAFIFSKFDMKSGFWQIQIHPKDRYKTAFTVPFGQYEWTVMPFGLKNAPSEFQRIMNDIYNPYSDFCIVYIDDVLIFSKSIDQHFKHLKTFYFATRKAGLAISNSKVSLFQTKIRFLGHHISKGTITP 596 E ++L LI S S W+C AFYVNK SE RG RLVINY+PLN L+ ++PIPNK L L A +FSKFD+KSGFWQ+ IHP +R KT F +P ++W VMPFGLK APS FQ+ M I+ P +VYIDD+L+FS++++ H K L F +K G+ +S K+ L Q KI+FLG + GT +P Sbjct: 1404 ECDELQQFDLIEPSDSQWACEAFYVNKRSEQVRGKLRLVINYQPLNHFLQDDKFPIPNKLTLFSHLSKAKLFSKFDLKSGFWQLGIHPNERPKTGFCIPDRHFQWKVMPFGLKTAPSLFQKAMIKIFQPILFSALVYIDDILLFSETLEDHIKLLNQFISLVKKFGVMLSAKKMILAQNKIQFLGMDFADGTFSP 1598
BLAST of FC919329 vs. ExPASy Swiss-Prot
Match: POL_CAMVS (Enzymatic polyprotein OS=Cauliflower mosaic virus (strain Strasbourg) GN=ORF V PE=3 SV=1) HSP 1 Score: 176.022 bits (445), Expect = 1.411e-43 Identity = 89/204 (43.63%), Postives = 124/204 (60.78%), Query Frame = -1 Query: 12 MDLEKHCKDEINDLVNKGLIVKSRSPWSCAAFYVNKNSEIERGTPRLVINYKPLNKSLKWIRYPIPNKNDLLQKLHSAFIFSKFDMKSGFWQIQIHPKDRYKTAFTVPFGQYEWTVMPFGLKNAPSEFQRIMNDIYNPYSDFCIVYIDDVLIFSKSIDQHFKHLKTFYFATRKAGLAISNSKVSLFQTKIRFLGHHISKGTITP 623 MD E+ K +I +L++ +I S+SP AF VN +E RG R+V+NYK +NK+ Y +PNK++LL + IFS FD KSGFWQ+ + + R TAFT P G YEW V+PFGLK APS FQR M++ + + FC VY+DD+L+FS + + H H+ + G+ +S K LF+ KI FLG I +GT P Sbjct: 257 MDREEFDK-QIKELLDLKVIKPSKSPHMAPAFLVNNEAEKRRGKKRMVVNYKAMNKATVGDAYNLPNKDELLTLIRGKKIFSSFDCKSGFWQVLLDQESRPLTAFTCPQGHYEWNVVPFGLKQAPSIFQRHMDEAFRVFRKFCCVYVDDILVFSNNEEDHLLHVAMILQKCNQHGIILSKKKAQLFKKKINFLGLEIDEGTHKP 459
BLAST of FC919329 vs. ExPASy Swiss-Prot
Match: POL_CAMVE (Enzymatic polyprotein OS=Cauliflower mosaic virus (strain BBC) GN=ORF V PE=3 SV=1) HSP 1 Score: 175.637 bits (444), Expect = 1.843e-43 Identity = 89/204 (43.63%), Postives = 124/204 (60.78%), Query Frame = -1 Query: 12 MDLEKHCKDEINDLVNKGLIVKSRSPWSCAAFYVNKNSEIERGTPRLVINYKPLNKSLKWIRYPIPNKNDLLQKLHSAFIFSKFDMKSGFWQIQIHPKDRYKTAFTVPFGQYEWTVMPFGLKNAPSEFQRIMNDIYNPYSDFCIVYIDDVLIFSKSIDQHFKHLKTFYFATRKAGLAISNSKVSLFQTKIRFLGHHISKGTITP 623 MD E+ K +I +L++ +I S+SP AF VN +E RG R+V+NYK +NK+ Y +PNK++LL + IFS FD KSGFWQ+ + + R TAFT P G YEW V+PFGLK APS FQR M++ + + FC VY+DD+L+FS + + H H+ + G+ +S K LF+ KI FLG I +GT P Sbjct: 257 MDREEFDK-QIKELLDLKVIKPSKSPHMAPAFLVNNEAEKRRGKKRMVVNYKAMNKATIGDAYNLPNKDELLTLIRGKKIFSSFDCKSGFWQVLLDQESRPLTAFTCPQGHYEWNVVPFGLKQAPSIFQRHMDEAFRVFRKFCCVYVDDILVFSNNEEDHLLHVAMILQKCNQHGIILSKKKAQLFKKKINFLGLEIDEGTHKP 459
BLAST of FC919329 vs. ExPASy Swiss-Prot
Match: POL_CAMVC (Enzymatic polyprotein OS=Cauliflower mosaic virus (strain CM-1841) GN=ORF V PE=3 SV=1) HSP 1 Score: 175.637 bits (444), Expect = 1.843e-43 Identity = 89/204 (43.63%), Postives = 124/204 (60.78%), Query Frame = -1 Query: 12 MDLEKHCKDEINDLVNKGLIVKSRSPWSCAAFYVNKNSEIERGTPRLVINYKPLNKSLKWIRYPIPNKNDLLQKLHSAFIFSKFDMKSGFWQIQIHPKDRYKTAFTVPFGQYEWTVMPFGLKNAPSEFQRIMNDIYNPYSDFCIVYIDDVLIFSKSIDQHFKHLKTFYFATRKAGLAISNSKVSLFQTKIRFLGHHISKGTITP 623 MD E+ K +I +L++ +I S+SP AF VN +E RG R+V+NYK +NK+ Y +PNK++LL + IFS FD KSGFWQ+ + + R TAFT P G YEW V+PFGLK APS FQR M++ + + FC VY+DD+L+FS + + H H+ + G+ +S K LF+ KI FLG I +GT P Sbjct: 257 MDREEFDK-QIKELLDLKVIKPSKSPHMAPAFLVNNEAEKRRGKKRMVVNYKAMNKATIGDAYNLPNKDELLTLIRGKKIFSSFDCKSGFWQVLLDQESRPLTAFTCPQGHYEWNVVPFGLKQAPSIFQRHMDEAFRVFRKFCCVYVDDILVFSNNEEDHLLHVAMILQKCNQHGIILSKKKAQLFKKKINFLGLEIDEGTHKP 459
BLAST of FC919329 vs. ExPASy Swiss-Prot
Match: POL_CAMVN (Enzymatic polyprotein OS=Cauliflower mosaic virus (strain NY8153) GN=ORF V PE=3 SV=1) HSP 1 Score: 174.481 bits (441), Expect = 4.105e-43 Identity = 88/204 (43.14%), Postives = 124/204 (60.78%), Query Frame = -1 Query: 12 MDLEKHCKDEINDLVNKGLIVKSRSPWSCAAFYVNKNSEIERGTPRLVINYKPLNKSLKWIRYPIPNKNDLLQKLHSAFIFSKFDMKSGFWQIQIHPKDRYKTAFTVPFGQYEWTVMPFGLKNAPSEFQRIMNDIYNPYSDFCIVYIDDVLIFSKSIDQHFKHLKTFYFATRKAGLAISNSKVSLFQTKIRFLGHHISKGTITP 623 MD E+ K +I +L++ +I S+SP AF VN +E RG R+V+NYK +NK+ Y +PNK++LL + IFS FD KSGFWQ+ + + R TAFT P G YEW V+PFGLK APS FQR M++ + + FC VY+DD+++FS + + H H+ + G+ +S K LF+ KI FLG I +GT P Sbjct: 258 MDREEFDK-QIKELLDLKVIKPSKSPHMAPAFLVNNEAENGRGNKRMVVNYKAMNKATVGDAYNLPNKDELLTLIRGKKIFSSFDCKSGFWQVLLDQESRPLTAFTCPQGHYEWNVVPFGLKQAPSIFQRHMDEAFRVFRKFCCVYVDDIVVFSNNEEDHLLHVAMILQKCNQHGIILSKKKAQLFKKKINFLGLEIDEGTHKP 460
BLAST of FC919329 vs. ExPASy Swiss-Prot
Match: POL_CAMVD (Enzymatic polyprotein OS=Cauliflower mosaic virus (strain D/H) GN=ORF V PE=3 SV=1) HSP 1 Score: 174.096 bits (440), Expect = 5.362e-43 Identity = 89/204 (43.63%), Postives = 123/204 (60.29%), Query Frame = -1 Query: 12 MDLEKHCKDEINDLVNKGLIVKSRSPWSCAAFYVNKNSEIERGTPRLVINYKPLNKSLKWIRYPIPNKNDLLQKLHSAFIFSKFDMKSGFWQIQIHPKDRYKTAFTVPFGQYEWTVMPFGLKNAPSEFQRIMNDIYNPYSDFCIVYIDDVLIFSKSIDQHFKHLKTFYFATRKAGLAISNSKVSLFQTKIRFLGHHISKGTITP 623 MD E+ K +I +L++ +I S+SP AF VN +E RG R+V+NYK +NK+ Y PNK++LL + IFS FD KSGFWQ+ + + R TAFT P G YEW V+PFGLK APS FQR M++ + + FC VY+DD+L+FS + + H H+ + G+ +S K LF+ KI FLG I +GT P Sbjct: 252 MDREEFDK-QIKELLDLKVIKPSKSPHMAPAFLVNNEAEKRRGKKRMVVNYKAMNKATVGDAYNPPNKDELLTLIRGKKIFSSFDCKSGFWQVLLDQESRPLTAFTCPQGHYEWNVVPFGLKQAPSIFQRHMDEAFRVFRKFCCVYVDDILVFSNNEEDHLLHVAMILQKCNQHGIILSKKKAQLFKKKINFLGLEIDEGTHKP 454
BLAST of FC919329 vs. ExPASy Swiss-Prot
Match: POL_FMVD (Enzymatic polyprotein OS=Figwort mosaic virus (strain DxS) GN=ORF V PE=3 SV=1) HSP 1 Score: 167.162 bits (422), Expect = 6.554e-41 Identity = 83/195 (42.56%), Postives = 116/195 (59.49%), Query Frame = -1 Query: 12 EINDLVNKGLIVKSRSPWSCAAFYVNKNSEIERGTPRLVINYKPLNKSLKWIRYPIPNKNDLLQKLHSAFIFSKFDMKSGFWQIQIHPKDRYKTAFTVPFGQYEWTVMPFGLKNAPSEFQRIMNDIYNPYSDFCIVYIDDVLIFSKSIDQHFKHLKTFYFATRKAGLAISNSKVSLFQTKIRFLGHHISKGTITP 596 +I +L++ GLI+ S+S AF V +E RG R+V+NYK +N++ + +PN +LL L IFS FD KSGFWQ+ + + + TAFT P G ++W V+PFGLK APS FQR M N FC+VY+DD+++FS S H+ H+ K G+ +S K +LF+ KI FLG I KGT P Sbjct: 258 QIKELLDLGLIIPSKSQHMSPAFLVENEAERRRGKKRMVVNYKAINQATIGDSHNLPNMQELLTLLRGKSIFSSFDCKSGFWQVVLDEESQKLTAFTCPQGHFQWKVVPFGLKQAPSIFQRHMQTALNGADKFCMVYVDDIIVFSNSELDHYNHVYAVLKIVEKYGIILSKKKANLFKEKINFLGLEIDKGTHCP 452
BLAST of FC919329 vs. ExPASy Swiss-Prot
Match: POL_CERV (Enzymatic polyprotein OS=Carnation etched ring virus GN=ORF V PE=3 SV=1) HSP 1 Score: 154.836 bits (390), Expect = 3.366e-37 Identity = 80/197 (40.61%), Postives = 115/197 (58.38%), Query Frame = -1 Query: 12 EINDLVNKGLIVKSRSPWSCAAFYVNKNSEIERGTPRLVINYKPLNKSLKWIRYPIPNKNDLLQKLHSAFIFSKFDMKSGFWQIQIHPKDRYKTAFTVPFGQYEWTVMPFGLKNAPSEFQR-IMNDIYNPYSDFCIVYIDDVLIFSKS-IDQHFKHLKTFYFATRKAGLAISNSKVSLFQTKIRFLGHHISKGTITP 596 +I +L+ +I S+S AF V +E RG R+V+NYK +NK+ K + +PNK++LL + I+S FD KSG WQ+ + + + TAFT P G Y+W V+PFGLK APS F + N N YS +C VY+DD+L+FS + +H+ H+ K G+ +S K LF+ KI FLG I +GT P Sbjct: 247 QIKELLELKVIKPSKSTHMSPAFLVENEAERRRGKKRMVVNYKAMNKATKGDAHNLPNKDELLTLVRGKKIYSSFDCKSGLWQVLLDKESQLLTAFTCPQGHYQWNVVPFGLKQAPSIFPKTYANSHSNQYSKYCCVYVDDILVFSNTGRKEHYIHVLNILRRCEKLGIILSKKKAQLFKEKINFLGLEIDQGTHCP 443
BLAST of FC919329 vs. ExPASy Swiss-Prot
Match: POL_SOCMV (Enzymatic polyprotein OS=Soybean chlorotic mottle virus GN=ORF V PE=3 SV=2) HSP 1 Score: 152.91 bits (385), Expect = 1.279e-36 Identity = 79/189 (41.80%), Postives = 117/189 (61.90%), Query Frame = -1 Query: 42 KDEINDLVNKGLIVKSRSPWSCAAFYVNKNSEIERGTPRLVINYKPLNKSLKWIRYPIPNKNDLLQKLHSAFIFSKFDMKSGFWQIQIHPKDRYKTAFTV-PFGQYEWTVMPFGLKNAPSEFQRIMNDIYNPYSDFCIVYIDDVLIFSK-SIDQHFKHLKTFYFATRKAGLAISNSKVSLFQTKIRFLG 602 K+E DL+ KGLI +S+SP S AFYV ++EI+RG R+VINYK +N++ Y +P K+ +L+K+ + FS D KSG++Q+++H + TAF+ P YEW V+ FGLK APS +QR M+ C+ YIDD+LIF+K S +QH ++ ++ G+ IS K L Q +I +LG Sbjct: 220 KEECEDLLKKGLIRESQSPHSAPAFYVENHNEIKRGKRRMVINYKKMNEATIGDSYKLPRKDFILEKIKGSLWFSSLDAKSGYYQLRLHENTKPLTAFSCPPQKHYEWNVLSFGLKQAPSIYQRFMDQSLKGLEHICLAYIDDILIFTKGSKEQHVNDVRIVLQRIKEKGIIISKKKSKLIQQEIEYLG 408 The following BLAST results are available for this feature:
BLAST of FC919329 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 42
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC919329 ID=FC919329; Name=FC919329; organism=Citrus clementina; type=EST; length=638bpback to top |