FC919329
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC919329 vs. ExPASy Swiss-Prot
Match: POL_RTBVP (Polyprotein P3 OS=Rice tungro bacilliform virus (isolate Philippines) PE=1 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 6.799e-30 Identity = 74/198 (37.37%), Postives = 113/198 (57.07%), Query Frame = -1 Query: 15 EINDLVNKGLIVKSRSPWS--CAAFYVNKNSEIERGTPRLVINYKPLNKSLKWIRYPIPNKNDLLQKLHSAFIFSKFDMKSGFWQIQIHPKDRYK--TAFTVPFGQYEWTVMPFGLKNAPSEFQRIMNDIYNPYSDFCIVYIDDVLIFSKSIDQHFKHLKTFYFATRKAGLAISNSKVSLFQTKIRFLGHHISKGTIT 596 +I +L++ LI K+ AAF V +SE PR+V NYK LN ++ + IP+K ++ + A IFSKFD+K+GF +++ KD +K T FT G Y W V PFG+ NAP FQR M + + F ++YIDD+LI S + +H +HLK F+ ++ G +S K +F ++ +LG I +G I+ Sbjct: 1202 QIKELLDNKLIKKADPTCRHRTAAFIVRNHSEEVAQKPRIVYNYKRLNDNMHTDPFNIPHKISMINLIQKANIFSKFDLKAGFHHMKL--KDDFKDWTTFTCSEGLYTWNVCPFGIANAPCAFQRFMQESFGDLK-FALLYIDDILIASNNEKEHIEHLKIFFNRVKEVGCVLSKKKSKMFLKEVEYLGVEIKEGKIS 1396
BLAST of FC919329 vs. ExPASy Swiss-Prot
Match: POL5_DROME (Retrovirus-related Pol polyprotein from transposon opus OS=Drosophila melanogaster GN=pol PE=4 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 5.755e-29 Identity = 73/205 (35.61%), Postives = 119/205 (58.05%), Query Frame = -1 Query: 30 PIQMNMDLEKHCKDEINDLVNKGLIVKSRSPWSCAAFYVNKNSEIERGTP-RLVINYKPLNKSLKWIRYPIPNKNDLLQKLHSAFIFSKFDMKSGFWQIQIHPKDRYKTAFTVPFGQYEWTVMPFGLKNAPSEFQRIMNDIYNPY-SDFCIVYIDDVLIFSKSIDQHFKHLKTFYFATRKAGLAISNSKVSLFQTKIRFLGHHIS 638 P+ M ++E+ +I++L+ G+I S SP++ + V K + R+V+++K LN YPIP+ N L L +A F+ D+ SGF QI + D KTAF+ G+YE+ +PFGLKNAP+ FQR+++DI + C VYIDD+++FS+ D H+K+L+ + KA L ++ K T++ FLG+ ++ Sbjct: 132 PVNMRGEVER----QIDELLQDGIIRPSNSPYNSPIWIVPKKPKPNGEKQYRMVVDFKRLNTVTIPDTYPIPDINATLASLGNAKYFTTLDLTSGFHQIHMKESDIPKTAFSTLNGKYEFLRLPFGLKNAPAIFQRMIDDILREHIGKVCYVYIDDIIVFSEDYDTHWKNLRLVLASLSKANLQVNLEKSHFLDTQVEFLGYIVT 332
BLAST of FC919329 vs. ExPASy Swiss-Prot
Match: POL4_DROME (Retrovirus-related Pol polyprotein from transposon 412 OS=Drosophila melanogaster GN=POL PE=4 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 1.518e-21 Identity = 62/201 (30.85%), Postives = 105/201 (52.24%), Query Frame = -1 Query: 3 EINDLVNKGLIVKSRSPWSCAAFYVNKNSE--IERGTPRLVINYKPLNKSLKWIRYPIPNKNDLLQKLHSAFIFSKFDMKSGFWQIQIHPKDRYKTAFTVPFGQYEWTVMPFGLKNAPSEFQRIMNDIYNPYS-DFCIVYIDDVLIFSKSIDQHFKHLKTFYFATRKAGLAISNSKVSLFQTKIRFLGHHISKGTITPIER 596 ++ L+ ++ S S ++ V K S ++ RLVI+Y+ +NK L ++P+P +D+L +L A FS D+ SGF QI++ R T+F+ G Y +T +PFGLK AP+ FQR+M ++ +Y+DD+++ S K+L + R+ L + K S F ++ FLGH + I P ++ Sbjct: 333 QVQKLIKDKIVEPSVSQYNSPLLLVPKKSSPNSDKKKWRLVIDYRQINKKLLADKFPLPRIDDILDQLGRAKYFSCLDLMSGFHQIELDEGSRDITSFSTSNGSYRFTRLPFGLKIAPNSFQRMMTIAFSGIEPSQAFLYMDDLIVIGCSEKHMLKNLTEVFGKCREYNLKLHPEKCSFFMHEVTFLGHKCTDKGILPDDK 533
BLAST of FC919329 vs. ExPASy Swiss-Prot
Match: RRPO_OENBE (RNA-directed DNA polymerase homolog OS=Oenothera bertiana PE=4 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 1.983e-21 Identity = 51/124 (41.13%), Postives = 78/124 (62.90%), Query Frame = -1 Query: 129 RLVINYKPLNKSLKWIRYPIPNKNDLLQKLHSAFIFSKFDMKSGFWQIQIHPKDRYKTAFTVPFGQYEWTVMPFGLKNAPSEFQRIMNDIYNPYSD-FCIVYIDDVL---IFSKSIDQHFKHLK 488 R+ I+Y+ L K +YPIP +DL +L A F+K D++SG+WQ++I D KT +G +E+ VMPFGL NA + F +MN++ Y D F +VY+DD++ I+S S+ +H KHL+ Sbjct: 7 RMCIDYRALTKVTIKNKYPIPRVDDLFDRLAQATWFTKLDLRSGYWQVRIAKGDEPKTTCVTRYGSFEFRVMPFGLTNALATFCNLMNNVLYEYLDHFVVVYLDDLVVYTIYSNSLHEHIKHLR 130
BLAST of FC919329 vs. ExPASy Swiss-Prot
Match: POL_FFV (Pro-Pol polyprotein OS=Feline foamy virus GN=pol PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 3.869e-17 Identity = 57/188 (30.32%), Postives = 95/188 (50.53%), Query Frame = -1 Query: 30 INDLVNKGLIVKSRSPWSCAAFYVNKNSEIERGTPRLVINYKPLNKSLKWIRYPIPNKNDLLQKLHSAFIFSKFDMKSGFWQIQIHPKDRYKTAFTVPFGQYEWTVMPFGLKNAPSEFQRIMNDIYNPYSDFCIVYIDDVLIFSKSIDQHFKHLKTFYFATRKAGLAISNSKVSLFQTKIRFLGHHIS 593 INDL+ +G++++ S + + V K + G R+V++Y+ +NK I + +L L + D+ +GFW I P+D + TAFT QY WTV+P G N+P F + D+ + VY+DDV I S +H ++L + ++AG IS K ++ + + FLG I+ Sbjct: 179 INDLLKQGVLIQKESTMNTPVYPVPKPN----GRWRMVLDYRAVNKVTPLIAVQNQHSYGILGSLFKGRYKTTIDLSNGFWAHPIVPEDYWITAFTWQGKQYCWTVLPQGFLNSPGLFTGDVVDLLQGIPN-VEVYVDDVYISHDSEKEHLEYLDILFNRLKEAGYIISLKKSNIANSIVDFLGFQIT 361
BLAST of FC919329 vs. ExPASy Swiss-Prot
Match: POL_SFV3L (Pro-Pol polyprotein OS=Simian foamy virus type 3 (strain LK3) GN=pol PE=3 SV=2) HSP 1 Score: 85.8853 bits (211), Expect = 1.920e-16 Identity = 53/189 (28.04%), Postives = 94/189 (49.74%), Query Frame = -1 Query: 27 INDLVNKGLIVKSRSPWSCAAFYVNKNSEIERGTPRLVINYKPLNKSLKWIRYPIPNKNDLLQKLHSAFIFSKFDMKSGFWQIQIHPKDRYKTAFTVPFGQYEWTVMPFGLKNAPSEFQRIMNDIYNPYSDFCIVYIDDVLIFSKSIDQHFKHLKTFYFATRKAGLAISNSKVSLFQTKIRFLGHHISK 593 INDL+ +G++++ S + + V K G R+V++Y+ +NK++ I + +L + + D+ +GFW I P+ + TAFT QY WT +P G N+P+ F + D+ + VY+DD+ I +H + L+ + AG +S K + Q ++ FLG +I+K Sbjct: 182 INDLLKQGVLIQQNSIMNTPVYPVPKPD----GKWRMVLDYREVNKTIPLIAAQNQHSAGILSSIFRGKYKTTLDLSNGFWAHSITPESYWLTAFTWLGQQYCWTRLPQGFLNSPALFTADVVDLLKEVPN-VQVYVDDIYISHDDPREHLEQLEKVFSLLLNAGYVVSLKKSEIAQHEVEFLGFNITK 365
BLAST of FC919329 vs. ExPASy Swiss-Prot
Match: POL_SFV1 (Pro-Pol polyprotein OS=Simian foamy virus type 1 GN=pol PE=1 SV=3) HSP 1 Score: 85.8853 bits (211), Expect = 1.920e-16 Identity = 51/189 (26.98%), Postives = 94/189 (49.74%), Query Frame = -1 Query: 27 INDLVNKGLIVKSRSPWSCAAFYVNKNSEIERGTPRLVINYKPLNKSLKWIRYPIPNKNDLLQKLHSAFIFSKFDMKSGFWQIQIHPKDRYKTAFTVPFGQYEWTVMPFGLKNAPSEFQRIMNDIYNPYSDFCIVYIDDVLIFSKSIDQHFKHLKTFYFATRKAGLAISNSKVSLFQTKIRFLGHHISK 593 I+DL+ +G++++ S + + V K G R+V++Y+ +NK++ I + +L ++ + D+ +GFW I P+ + TAFT QY WT +P G N+P+ F + D+ + Y+DD+ I +H + L+ + AG +S K + Q ++ FLG +I+K Sbjct: 182 IDDLLKQGVLIQQNSTMNTPVYPVPKPD----GKWRMVLDYREVNKTIPLIAAQNQHSAGILSSIYRGKYKTTLDLTNGFWAHPITPESYWLTAFTWQGKQYCWTRLPQGFLNSPALFTADVVDLLKEIPN-VQAYVDDIYISHDDPQEHLEQLEKIFSILLNAGYVVSLKKSEIAQREVEFLGFNITK 365
BLAST of FC919329 vs. ExPASy Swiss-Prot
Match: YRD6_CAEEL (Uncharacterized protein K02A2.6 OS=Caenorhabditis elegans GN=K02A2.6 PE=2 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 2.773e-15 Identity = 52/188 (27.66%), Postives = 98/188 (52.13%), Query Frame = -1 Query: 42 EINDLVNKGLIVK-SRSPWSCAAFYVNKNSEIERGTPRLVINYK--PLNKSLKWIRYPIPNKNDLLQKLHSAFIFSKFDMKSGFWQIQIHPKDRYKTAFTVPFGQYEWTVMPFGLKNAPSEFQRIMNDIYNPYSDFCIVYIDDVLIFSKSIDQHFKHLKTFYFATRKAGLAISNSKVSLFQTKIRFLG 596 E+N L G+IV + + W+ + K G R+ ++K LN +LK +P+P D+ +L ++S+ D+K + Q+++ + + G +++ M FGLK AP+ FQ+IM+ + + + VY DD++I + SI++H K L+ + ++ G +S K + Q ++ FLG Sbjct: 459 ELNRLQEMGVIVPITYAKWAAPIVVIKKKGT---GKIRVCADFKCSGLNAALKDEFHPLPTSEDIFSRLKGT-VYSQIDLKDAYLQVELDEEAQKLAVINTHRGIFKYLRMTFGLKPAPASFQKIMDKMVSGLTGVA-VYWDDIIISASSIEEHEKILRELFERFKEYGFRVSAEKCAFAQKQVTFLG 641
BLAST of FC919329 vs. ExPASy Swiss-Prot
Match: POL_GALV (Pol polyprotein OS=Gibbon ape leukemia virus GN=pol PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 6.830e-14 Identity = 55/223 (24.66%), Postives = 104/223 (46.64%), Query Frame = -1 Query: 3 MNMDLEKHCKDEINDLVNKGLIVKSRSPWSCAAFYVNKNSEIERGTPRLVINYKPLNKSLKWIRYPIPNKNDLLQKLHSAFI-FSKFDMKSGFWQIQIHPKDRYKTAFTVP------FGQYEWTVMPFGLKNAPSEFQRIMNDIYNPYSDF-----CIVYIDDVLIFSKSIDQHFKHLKTFYFATRKAGLAISNSKVSLFQTKIRFLGHHISKGT--ITPIER 629 M+ + + + I ++ G++V RSPW+ V K + R V + + +NK ++ I +PN +LL L ++ +S D+K F+ +++HP + AF GQ WT +P G KN+P+ F ++ P+ + Y+DD+L+ + + + K + K G +S K L Q ++ +LG+ + +G +TP + Sbjct: 183 MSKEAREGIRPHIQKFLDLGVLVPCRSPWNTPLLPVKKPGTNDY---RPVQDLREINKRVQDIHPTVPNPYNLLSSLPPSYTWYSVLDLKDAFFCLRLHPNSQPLFAFEWKDPEKGNTGQLTWTRLPQGFKNSPTLFDEALHRDLAPFRALNPQVVLLQYVDDLLVAAPTYEDCKKGTQKLLQELSKLGYRVSAKKAQLCQREVTYLGYLLKEGKRWLTPARK 402
BLAST of FC919329 vs. ExPASy Swiss-Prot
Match: POL_FOAMV (Pro-Pol polyprotein OS=Human spumaretrovirus GN=pol PE=1 SV=2) HSP 1 Score: 77.411 bits (189), Expect = 6.830e-14 Identity = 50/189 (26.46%), Postives = 91/189 (48.15%), Query Frame = -1 Query: 27 INDLVNKGLIVKSRSPWSCAAFYVNKNSEIERGTPRLVINYKPLNKSLKWIRYPIPNKNDLLQKLHSAFIFSKFDMKSGFWQIQIHPKDRYKTAFTVPFGQYEWTVMPFGLKNAPSEFQRIMNDIYNPYSDFCIVYIDDVLIFSKSIDQHFKHLKTFYFATRKAGLAISNSKVSLFQTKIRFLGHHISK 593 I+DL+ +G++ S + + V K G R+V++Y+ +NK++ + +L + + D+ +GFW I P+ + TAFT QY WT +P G N+P+ F + D+ + VY+DD+ + +H + L+ + +AG +S K + Q + FLG +I+K Sbjct: 182 IDDLLKQGVLTPQNSTMNTPVYPVPKPD----GRWRMVLDYREVNKTIPLTAAQNQHSAGILATIVRQKYKTTLDLANGFWAHPITPESYWLTAFTWQGKQYCWTRLPQGFLNSPALFTADVVDLLKEIPN-VQVYVDDIYLSHDDPKEHVQQLEKVFQILLQAGYVVSLKKSEIGQKTVEFLGFNITK 365 The following BLAST results are available for this feature:
BLAST of FC919329 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 42
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Sequences
The
following sequences are available for this feature:
EST sequence >FC919329 ID=FC919329; Name=FC919329; organism=Citrus clementina; type=EST; length=638bpback to top |