FC920405
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC920405 vs. ExPASy Swiss-Prot
Match: RL5_CUCSA (60S ribosomal protein L5 OS=Cucumis sativus GN=RPL5 PE=2 SV=1) HSP 1 Score: 338.191 bits (866), Expect = 2.608e-92 Identity = 167/201 (83.08%), Postives = 182/201 (90.55%), Query Frame = 3 Query: 105 KAQKSKAYFKRYQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDITAQIISASIAGDIVLASAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDAEYEGNVEATGEDYSVEPTENRRPFRALLDVGLVKTTTGNRVFXXXXXXXXXXXXIPHSEKRFAGFSKDSKQLDAEVHRKYIYCGRVAA 707 KAQK+KAYFKRYQVK+KRRREGKTDYRARIRLINQDKNKYNTPKYRFVVR +NKDITAQIISASIAGD+VLASAY+HELP+YGLEVGLTNYAAAYCTGLLLARRVLKMLEMDAEYEGNVEATGEDYSVEP + RRPFRALLDVGL++TTTGNRVF IPHS+KRFAG++K+ +QLD EVHRKYI+ G VAA Sbjct: 5 KAQKTKAYFKRYQVKFKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRTSNKDITAQIISASIAGDLVLASAYSHELPQYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDAEYEGNVEATGEDYSVEPADTRRPFRALLDVGLIRTTTGNRVFGALKGALDGGLDIPHSDKRFAGYAKNGQQLDVEVHRKYIFGGHVAA 205
BLAST of FC920405 vs. ExPASy Swiss-Prot
Match: RL52_ARATH (60S ribosomal protein L5-2 OS=Arabidopsis thaliana GN=RPL5B PE=2 SV=3) HSP 1 Score: 330.872 bits (847), Expect = 4.164e-90 Identity = 162/200 (81.00%), Postives = 178/200 (89.00%), Query Frame = 3 Query: 105 KAQKSKAYFKRYQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDITAQIISASIAGDIVLASAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDAEYEGNVEATGEDYSVEPTENRRPFRALLDVGLVKTTTGNRVFXXXXXXXXXXXXIPHSEKRFAGFSKDSKQLDAEVHRKYIYCGRVA 704 K+ KS AYFKRYQVK++RRR+GKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDI AQI+SASIAGDIV ASAYAHELP+YGL VGLTNYAAAYCTGLLLARRVLKMLEMD EYEGNVEATGED+SVEPT++RRPFRALLDVGL++TTTGNRVF IPHS+KRFAGF K++KQLDAE+HR YIY G V+ Sbjct: 5 KSSKSNAYFKRYQVKFRRRRDGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDIVAQIVSASIAGDIVKASAYAHELPQYGLTVGLTNYAAAYCTGLLLARRVLKMLEMDDEYEGNVEATGEDFSVEPTDSRRPFRALLDVGLIRTTTGNRVFGALKGALDGGLDIPHSDKRFAGFHKENKQLDAEIHRNYIYGGHVS 204
BLAST of FC920405 vs. ExPASy Swiss-Prot
Match: RL51_ARATH (60S ribosomal protein L5-1 OS=Arabidopsis thaliana GN=ATL5 PE=2 SV=2) HSP 1 Score: 330.487 bits (846), Expect = 5.438e-90 Identity = 162/200 (81.00%), Postives = 178/200 (89.00%), Query Frame = 3 Query: 105 KAQKSKAYFKRYQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDITAQIISASIAGDIVLASAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDAEYEGNVEATGEDYSVEPTENRRPFRALLDVGLVKTTTGNRVFXXXXXXXXXXXXIPHSEKRFAGFSKDSKQLDAEVHRKYIYCGRVA 704 K+ KS AYFKRYQVK++RRR+GKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDI AQI+SASIAGDIV ASAYAHELP+YGL VGLTNYAAAYCTGLLLARRVLKMLEMD EYEGNVEATGED+SVEPT++RRPFRALLDVGL++TTTGNRVF IPHS+KRFAGF K++KQLDAE+HR YIY G V+ Sbjct: 5 KSTKSNAYFKRYQVKFRRRRDGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDIVAQIVSASIAGDIVKASAYAHELPQYGLTVGLTNYAAAYCTGLLLARRVLKMLEMDDEYEGNVEATGEDFSVEPTDSRRPFRALLDVGLIRTTTGNRVFGALKGALDGGLDIPHSDKRFAGFHKENKQLDAEIHRNYIYGGHVS 204
BLAST of FC920405 vs. ExPASy Swiss-Prot
Match: RL51_ORYSI (60S ribosomal protein L5-1 OS=Oryza sativa subsp. indica GN=RPL5A PE=2 SV=2) HSP 1 Score: 321.242 bits (822), Expect = 3.299e-87 Identity = 154/200 (77.00%), Postives = 174/200 (87.00%), Query Frame = 3 Query: 105 KAQKSKAYFKRYQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDITAQIISASIAGDIVLASAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDAEYEGNVEATGEDYSVEPTENRRPFRALLDVGLVKTTTGNRVFXXXXXXXXXXXXIPHSEKRFAGFSKDSKQLDAEVHRKYIYCGRVA 704 K QK+ AY+KR+QVK+KRRR+GKTDYRARIRL NQDKNKYNTPKYRFVVRFTNKDITAQI+ A+IAGDIV+A+AY+HELPRYGLEVGLTNYAAAYCTGLLLARRVLK+ +D EYEGN+EATGEDY VEP + RRPFRALLDVGL++TTTGNRVF IPHS+KRFAGF KD KQLD+++HRKYIY G VA Sbjct: 6 KTQKTNAYYKRFQVKFKRRRQGKTDYRARIRLTNQDKNKYNTPKYRFVVRFTNKDITAQIVYATIAGDIVMAAAYSHELPRYGLEVGLTNYAAAYCTGLLLARRVLKLRGLDQEYEGNIEATGEDYYVEPADERRPFRALLDVGLIRTTTGNRVFGALKGALDGGLDIPHSDKRFAGFKKDEKQLDSDIHRKYIYGGHVA 205
BLAST of FC920405 vs. ExPASy Swiss-Prot
Match: RL51_ORYSJ (60S ribosomal protein L5-1 OS=Oryza sativa subsp. japonica GN=RPL5A PE=2 SV=1) HSP 1 Score: 319.701 bits (818), Expect = 9.600e-87 Identity = 154/200 (77.00%), Postives = 173/200 (86.50%), Query Frame = 3 Query: 105 KAQKSKAYFKRYQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDITAQIISASIAGDIVLASAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDAEYEGNVEATGEDYSVEPTENRRPFRALLDVGLVKTTTGNRVFXXXXXXXXXXXXIPHSEKRFAGFSKDSKQLDAEVHRKYIYCGRVA 704 K QK+ AY KR+QVK+KRRR+GKTDYRARIRL NQDKNKYNTPKYRFVVRFTNKDITAQI+ A+IAGDIV+A+AY+HELPRYGLEVGLTNYAAAYCTGLLLARRVLK+ +D EYEGN+EATGEDY VEP + RRPFRALLDVGL++TTTGNRVF IPHS+KRFAGF KD KQLD+++HRKYIY G VA Sbjct: 6 KTQKTNAYHKRFQVKFKRRRQGKTDYRARIRLTNQDKNKYNTPKYRFVVRFTNKDITAQIVYATIAGDIVMAAAYSHELPRYGLEVGLTNYAAAYCTGLLLARRVLKLRGLDQEYEGNIEATGEDYYVEPADERRPFRALLDVGLIRTTTGNRVFGALKGALDGGLDIPHSDKRFAGFKKDEKQLDSDIHRKYIYGGHVA 205
BLAST of FC920405 vs. ExPASy Swiss-Prot
Match: RL52_ORYSJ (60S ribosomal protein L5-2 OS=Oryza sativa subsp. japonica GN=RPL5B PE=3 SV=1) HSP 1 Score: 308.916 bits (790), Expect = 1.695e-83 Identity = 152/200 (76.00%), Postives = 170/200 (85.00%), Query Frame = 3 Query: 105 KAQKSKAYFKRYQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDITAQIISASIAGDIVLASAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDAEYEGNVEATGEDYSVEPTENRRPFRALLDVGLVKTTTGNRVFXXXXXXXXXXXXIPHSEKRFAGFSKDSKQLDAEVHRKYIYCGRVA 704 K QK+ AYFKR+QVK+KRRR+GKTDYRARIRL NQDKNKYNTPKYRFV TNKDITAQI+ A+IAGDIV+A+AY+HELPRYGLEVGLTNYAAAYCTGLLLARRVL + +D EYEGNVEATGEDY VEP + RRPFRALLDVGL++TTTGNRVF IPHS+KRFAGF KD KQLD+++HRKYIY G VA Sbjct: 9 KTQKTHAYFKRFQVKFKRRRQGKTDYRARIRLTNQDKNKYNTPKYRFV---TNKDITAQIVYATIAGDIVMAAAYSHELPRYGLEVGLTNYAAAYCTGLLLARRVLTLRGLDQEYEGNVEATGEDYYVEPADERRPFRALLDVGLIRTTTGNRVFGALKGALDGGLDIPHSDKRFAGFKKDEKQLDSDIHRKYIYGGHVA 205
BLAST of FC920405 vs. ExPASy Swiss-Prot
Match: RL5_SUBDO (60S ribosomal protein L5 OS=Suberites domuncula GN=RPL5 PE=2 SV=1) HSP 1 Score: 250.366 bits (638), Expect = 7.152e-66 Identity = 127/201 (63.18%), Postives = 150/201 (74.63%), Query Frame = 3 Query: 105 KAQKSKAYFKRYQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDITAQIISASIAGDIVLASAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDAEYEGNVEATGEDYSVEPT-ENRRPFRALLDVGLVKTTTGNRVFXXXXXXXXXXXXIPHSEKRFAGFSKDSKQLDAEVHRKYIYCGRVA 704 K K+KAYFKRYQVK++RRREGKTDYRAR RL+ QDKNKYNTPKYR V+RFTN DI QII A I GD VL SAYAHELPRYG++VGLTNYAAAYCTGLLLARR+L L + +Y G + GED++VE + RPFRA LDVGL +TTTGNRVF IPHS RF G+ ++S QL+A+ R+YI+ G V+ Sbjct: 5 KVIKNKAYFKRYQVKFRRRREGKTDYRARKRLVVQDKNKYNTPKYRIVIRFTNTDIICQIIYAKIEGDKVLVSAYAHELPRYGVKVGLTNYAAAYCTGLLLARRLLTNLGLADKYAGQTDIDGEDFNVEHMGDGPRPFRAFLDVGLTRTTTGNRVFAAMKGAVDGGIDIPHSPSRFVGYDEESSQLEADKLRQYIFGGHVS 205
BLAST of FC920405 vs. ExPASy Swiss-Prot
Match: RL5_CAEBR (60S ribosomal protein L5 OS=Caenorhabditis briggsae GN=rpl-5 PE=3 SV=2) HSP 1 Score: 249.98 bits (637), Expect = 9.341e-66 Identity = 124/200 (62.00%), Postives = 149/200 (74.50%), Query Frame = 3 Query: 105 KAQKSKAYFKRYQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDITAQIISASIAGDIVLASAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDAEYEGNVEATGEDYSVEPTENRRPFRALLDVGLVKTTTGNRVFXXXXXXXXXXXXIPHSEKRFAGFSKDSKQLDAEVHRKYIYCGRVA 704 K K+KAYFKRYQVK KRRREGKTDY AR RL QDKNKYNTPKYR +VR TNKDI AQ+ + I GD+V+ASAYAHELPRYGL+ GLTNYAAAY TGLLLARR LK + +D+ Y+G+ E TGEDY+VE +R PF+A+LD+GL +TTTG+++F +PHSE RF GF ++SK +AE HR I VA Sbjct: 5 KVIKNKAYFKRYQVKLKRRREGKTDYYARKRLTVQDKNKYNTPKYRLIVRLTNKDIVAQLAYSKIEGDVVVASAYAHELPRYGLKAGLTNYAAAYATGLLLARRHLKAIGLDSTYKGHEELTGEDYNVEEEGDRAPFKAVLDIGLARTTTGSKIFAVMKGVADGGINVPHSESRFFGFDQESKDYNAEAHRDRILGKHVA 204
BLAST of FC920405 vs. ExPASy Swiss-Prot
Match: RL5_CAEEL (60S ribosomal protein L5 OS=Caenorhabditis elegans GN=rpl-5 PE=2 SV=1) HSP 1 Score: 249.595 bits (636), Expect = 1.220e-65 Identity = 122/200 (61.00%), Postives = 151/200 (75.50%), Query Frame = 3 Query: 105 KAQKSKAYFKRYQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDITAQIISASIAGDIVLASAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDAEYEGNVEATGEDYSVEPTENRRPFRALLDVGLVKTTTGNRVFXXXXXXXXXXXXIPHSEKRFAGFSKDSKQLDAEVHRKYIYCGRVA 704 K K+KAYFKRYQVK +RRREGKTDY AR RL QDKNKYNTPKYR +VR TNKD+ AQ+ + I GD+V+ASAY+HELPRYGL+VGLTNYAAAY TGLLLARR LK + +D+ Y+G+ E TGEDY+VE +R PF+A+LD+GL +TTTG+++F +PHSE RF GF ++SK+ +AE HR I VA Sbjct: 5 KVIKNKAYFKRYQVKLRRRREGKTDYYARKRLTVQDKNKYNTPKYRLIVRITNKDVVAQLAYSKIEGDVVVASAYSHELPRYGLKVGLTNYAAAYATGLLLARRHLKTIGLDSTYKGHEELTGEDYNVEEEGDRAPFKAVLDIGLARTTTGSKIFAVMKGVADGGINVPHSESRFFGFDQESKEYNAEAHRDRILGKHVA 204
BLAST of FC920405 vs. ExPASy Swiss-Prot
Match: RL5_HUMAN (60S ribosomal protein L5 OS=Homo sapiens GN=RPL5 PE=1 SV=3) HSP 1 Score: 243.432 bits (620), Expect = 8.743e-64 Identity = 121/201 (60.20%), Postives = 147/201 (73.13%), Query Frame = 3 Query: 105 KAQKSKAYFKRYQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDITAQIISASIAGDIVLASAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDAEYEGNVEATGEDYSVEPTENR-RPFRALLDVGLVKTTTGNRVFXXXXXXXXXXXXIPHSEKRFAGFSKDSKQLDAEVHRKYIYCGRVA 704 K K+KAYFKRYQVK++RRREGKTDY AR RL+ QDKNKYNTPKYR +VR TN+DI QI A I GD+++ +AYAHELP+YG++VGLTNYAAAYCTGLLLARR+L MD YEG VE TG++Y+VE + + F LD GL +TTTGN+VF IPHS KRF G+ +SK+ +AEVHRK+I VA Sbjct: 5 KVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYEGQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKGAVDGGLSIPHSTKRFPGYDSESKEFNAEVHRKHIMGQNVA 205 The following BLAST results are available for this feature:
BLAST of FC920405 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 80
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920405 ID=FC920405; Name=FC920405; organism=Citrus clementina; type=EST; length=708bpback to top |