FC920562
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC920562 vs. ExPASy Swiss-Prot
Match: NUOF_RICRS (NADH-quinone oxidoreductase subunit F OS=Rickettsia rickettsii (strain Sheila Smith) GN=nuoF PE=2 SV=1) HSP 1 Score: 332.028 bits (850), Expect = 1.938e-90 Identity = 156/240 (65.00%), Postives = 187/240 (77.92%), Query Frame = 3 Query: 3 DRIFTNLHGLHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKTILVQNCLCV 722 D+IFTNLHG LK + KRGDW TK L+ KG D+IV EVKKSGLRGRGGAGF +G+KWSFMPK + + YLVVNADESEPGTCKDR+I+R +PHKL+EGCL+A + A+ YIYIRGE+ NE N++RA EAY GL+GKN+CGSG+D ++++H GAGAYICGEETALLESLEGK+G PRLKPPFPA GLYGCPTT+ NVE++AV PTILRRG WFA G+ C+ Sbjct: 6 DKIFTNLHGQQSHDLKSSKKRGDWENTKALLDKGRDFIVEEVKKSGLRGRGGAGFSTGMKWSFMPKNLE-KSCYLVVNADESEPGTCKDRDILRFEPHKLIEGCLLASFAIGANNCYIYIRGEFYNEASNIQRALDEAYKEGLIGKNSCGSGFDCNIYLHRGAGAYICGEETALLESLEGKKGMPRLKPPFPAGFGLYGCPTTINNVESIAVVPTILRRGASWFAGIGKPNNTGTKIFCI 244
BLAST of FC920562 vs. ExPASy Swiss-Prot
Match: NUOF_RICCN (NADH-quinone oxidoreductase subunit F OS=Rickettsia conorii GN=nuoF PE=3 SV=1) HSP 1 Score: 332.028 bits (850), Expect = 1.938e-90 Identity = 156/240 (65.00%), Postives = 187/240 (77.92%), Query Frame = 3 Query: 3 DRIFTNLHGLHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKTILVQNCLCV 722 D+IFTNLHG LK + KRGDW TK L+ KG D+IV EVKKSGLRGRGGAGF +G+KWSFMPK + + YLVVNADESEPGTCKDR+I+R +PHKL+EGCL+A + A+ YIYIRGE+ NE N++RA EAY GL+GKN+CGSG+D ++++H GAGAYICGEETALLESLEGK+G PRLKPPFPA GLYGCPTT+ NVE++AV PTILRRG WFA G+ C+ Sbjct: 6 DKIFTNLHGQQSHDLKSSKKRGDWENTKALLDKGRDFIVEEVKKSGLRGRGGAGFSTGMKWSFMPKNLE-KSCYLVVNADESEPGTCKDRDILRFEPHKLIEGCLLASFAIGANNCYIYIRGEFYNEASNIQRALDEAYKEGLIGKNSCGSGFDCNIYLHRGAGAYICGEETALLESLEGKKGMPRLKPPFPAGFGLYGCPTTINNVESIAVVPTILRRGASWFAGIGKPNNTGTKIFCI 244
BLAST of FC920562 vs. ExPASy Swiss-Prot
Match: NUOF_RICAH (NADH-quinone oxidoreductase subunit F OS=Rickettsia akari (strain Hartford) GN=nuoF PE=3 SV=1) HSP 1 Score: 331.257 bits (848), Expect = 3.305e-90 Identity = 158/242 (65.29%), Postives = 191/242 (78.93%), Query Frame = 3 Query: 3 DRIFTNLHG--LHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKTILVQNCLCV 722 D+IFTNLHG +HD LK + KRGDW TK L+ KG D+I+ E+KKSGLRGRGGAGF +G+KWSFMPK S+ +P YLVVNADESEPGTCKDR+I+R +PHKL+EGCL+A + A+ YIYIRGE+ NE N++RA EAY L+GKNACGSG+D ++++H GAGAYICGEETALLESLEGK+G PRLKPPFPA GLYGCPTT+ NVE++AV PTILRR WFAS G+ C+ Sbjct: 6 DKIFTNLHGGQIHD--LKSSKKRGDWDNTKALLDKGRDFIIEEIKKSGLRGRGGAGFSTGMKWSFMPKNSE-KPCYLVVNADESEPGTCKDRDILRFEPHKLIEGCLLASFAIGANNCYIYIRGEFYNEASNIQRALDEAYKDRLIGKNACGSGFDCNIYLHRGAGAYICGEETALLESLEGKKGMPRLKPPFPAGFGLYGCPTTINNVESIAVVPTILRRRASWFASIGKPNNTGTKIFCI 244
BLAST of FC920562 vs. ExPASy Swiss-Prot
Match: NUOF_STRCO (NADH-quinone oxidoreductase subunit F OS=Streptomyces coelicolor GN=nuoF PE=3 SV=1) HSP 1 Score: 249.98 bits (637), Expect = 9.683e-66 Identity = 119/193 (61.66%), Postives = 149/193 (77.20%), Query Frame = 3 Query: 108 DWIVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFG 686 D ++ VK+SGLRGRGGAGFP+G+KW F+P+ DG+P YLVVNADESEPGTCKD ++ +PH L+EG +IA +R+S A+IY+RGE V + L A +EAYAAG LG+N GSG D + +H GAGAYICGEETALL+SLEG++G+PRL+PPFPA AGLY CPT V NVE++A P IL +G DWF S G Sbjct: 54 DDLIAYVKESGLRGRGGAGFPTGMKWQFIPQ-GDGKPHYLVVNADESEPGTCKDIPLLFANPHSLIEGIVIACYAIRSSHAFIYLRGEVVPVLRRLHEAVREAYAAGFLGENILGSGLDLTLTVHAGAGAYICGEETALLDSLEGRRGQPRLRPPFPAVAGLYACPTVVNNVESIASVPAILNKGKDWFRSMG 245
BLAST of FC920562 vs. ExPASy Swiss-Prot
Match: NQO1_THET8 (NADH-quinone oxidoreductase subunit 1 OS=Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) GN=nqo1 PE=1 SV=1) HSP 1 Score: 249.98 bits (637), Expect = 9.683e-66 Identity = 121/211 (57.35%), Postives = 153/211 (72.51%), Query Frame = 3 Query: 57 MKRGDWHRTKDLVL-KGADWIVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFG 686 ++ G + K ++ K D ++ EVK+SGLRGRGGAGFP+GLKWSFMPK DG+ YL+ NADESEPG+ KDR I+ PH L+EG ++AG +RA+ YIY+RGEY LE+A +EA A G LGKN G+ + FD+H+H GAGAYICGEETAL+ SLEG + PRLKPPFPA +GL+G PTT+ NVET+A I+ RG DWFA G Sbjct: 33 LRHGGYETAKRVLKEKTPDEVIEEVKRSGLRGRGGAGFPTGLKWSFMPK-DDGKQHYLICNADESEPGSFKDRYILEDVPHLLIEGMILAGYAIRATVGYIYVRGEYRRAADRLEQAIKEARARGYLGKNLFGTDFSFDLHVHRGAGAYICGEETALMNSLEGLRANPRLKPPFPAQSGLWGKPTTINNVETLASVVPIMERGADWFAQMG 242
BLAST of FC920562 vs. ExPASy Swiss-Prot
Match: NUOF_MYCTU (NADH-quinone oxidoreductase subunit F OS=Mycobacterium tuberculosis GN=nuoF PE=3 SV=1) HSP 1 Score: 244.973 bits (624), Expect = 3.115e-64 Identity = 118/196 (60.20%), Postives = 147/196 (75.00%), Query Frame = 3 Query: 108 DWIVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDG---RPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFG 686 D +++ VK SGLRGRGGAGF +G KWSF+P+ G +P YLVVNADESEPGTCKD +M PH L+EG +IA +RA A++Y+RGE V + L A EAYAAG LG+N GSG+D ++ +H GAGAYICGEETALL+SLEG++G+PRL+PPFPA AGLYGCPT + NVET+A P+I+ G DWF S G Sbjct: 48 DDVISIVKDSGLRGRGGAGFATGTKWSFIPQGDTGAAAKPHYLVVNADESEPGTCKDIPLMLATPHVLIEGVIIAAYAIRAHHAFVYVRGEVVPVLRRLHNAVAEAYAAGFLGRNIGGSGFDLELVVHAGAGAYICGEETALLDSLEGRRGQPRLRPPFPAVAGLYGCPTVINNVETIASVPSIILGGIDWFRSMG 243
BLAST of FC920562 vs. ExPASy Swiss-Prot
Match: NUOF_MYCBO (NADH-quinone oxidoreductase subunit F OS=Mycobacterium bovis GN=nuoF PE=3 SV=1) HSP 1 Score: 244.973 bits (624), Expect = 3.115e-64 Identity = 118/196 (60.20%), Postives = 147/196 (75.00%), Query Frame = 3 Query: 108 DWIVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDG---RPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFG 686 D +++ VK SGLRGRGGAGF +G KWSF+P+ G +P YLVVNADESEPGTCKD +M PH L+EG +IA +RA A++Y+RGE V + L A EAYAAG LG+N GSG+D ++ +H GAGAYICGEETALL+SLEG++G+PRL+PPFPA AGLYGCPT + NVET+A P+I+ G DWF S G Sbjct: 48 DDVISIVKDSGLRGRGGAGFATGTKWSFIPQGDTGAAAKPHYLVVNADESEPGTCKDIPLMLATPHVLIEGVIIAAYAIRAHHAFVYVRGEVVPVLRRLHNAVAEAYAAGFLGRNIGGSGFDLELVVHAGAGAYICGEETALLDSLEGRRGQPRLRPPFPAVAGLYGCPTVINNVETIASVPSIILGGIDWFRSMG 243
BLAST of FC920562 vs. ExPASy Swiss-Prot
Match: NUOF2_RHIME (NADH-quinone oxidoreductase subunit F 2 OS=Rhizobium meliloti GN=nuoF2 PE=3 SV=2) HSP 1 Score: 240.736 bits (613), Expect = 5.875e-63 Identity = 117/193 (60.62%), Postives = 141/193 (73.06%), Query Frame = 3 Query: 108 DWIVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFG 686 D IV VK+S LRGRGGAGFP+G+KWSF+PK + G+P YL NADE EPGT KDR IM DPH+L+EG ++ + A AY+YIRGEYV + +E+A EA+ G LG GSG++F VHIH GAGAYICGEETA+LESLEGK+ +PRLKPPFPA AGLY PT + NVET+A P I+ RG WF G Sbjct: 40 DEIVELVKESNLRGRGGAGFPTGMKWSFVPKAA-GKPKYLCCNADEGEPGTFKDRIIMERDPHQLIEGLAVSAYAIGAETAYVYIRGEYVTAIRRMEQAIAEAHENGYLGIGILGSGFNFMVHIHRGAGAYICGEETAMLESLEGKRAQPRLKPPFPAVAGLYASPTVINNVETLACVPHIVMRGSAWFRGIG 231
BLAST of FC920562 vs. ExPASy Swiss-Prot
Match: NUOF_PSEAE (NADH-quinone oxidoreductase subunit F OS=Pseudomonas aeruginosa GN=nuoF PE=3 SV=1) HSP 1 Score: 225.713 bits (574), Expect = 1.956e-58 Identity = 111/202 (54.95%), Postives = 137/202 (67.82%), Query Frame = 3 Query: 84 KDLVLKGADWIVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGR 689 K L D IV VK SGL+GRGGAGFP+G+KW MPK YL+ NADE EP T KDR +M PH L+EG LI+ ++A YI++RGEYV+ +NL RA EA AAGLLGKN GSG+DF++ +H GAG YICGEETAL+ SLEG++ PR KPPFPA G++G PT V NVET+ P I+ G DW+ + R Sbjct: 48 KALTQMAQDDIVQTVKDSGLKGRGGAGFPTGVKWGLMPKDESLNIRYLLCNADEMEPNTWKDRMLMEQLPHLLVEGMLISARALKAYRGYIFLRGEYVDAARNLNRAIDEAKAAGLLGKNILGSGFDFELFVHTGAGRYICGEETALINSLEGRRANPRSKPPFPAAVGVWGKPTCVNNVETLCNVPAIVGNGVDWYKTLAR 249
BLAST of FC920562 vs. ExPASy Swiss-Prot
Match: NUOF_ECOLI (NADH-quinone oxidoreductase subunit F OS=Escherichia coli (strain K12) GN=nuoF PE=1 SV=3) HSP 1 Score: 223.787 bits (569), Expect = 7.432e-58 Identity = 111/210 (52.86%), Postives = 139/210 (66.19%), Query Frame = 3 Query: 60 KRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGR 689 K G K L D IVN+VK +GL+GRGGAGF +GLKWS MPK YL+ NADE EPGT KDR +M PH L+EG LI+ ++A YI++RGEY+ NL RA EA AGLLGKN G+G+DF++ +H GAG YICGEETAL+ SLEG++ PR KPPFPA +G +G PT V NVET+ P IL G +W+ + + Sbjct: 32 KNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISK 241 The following BLAST results are available for this feature:
BLAST of FC920562 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 37
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920562 ID=FC920562; Name=FC920562; organism=Citrus clementina; type=EST; length=725bpback to top |