FC920562
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC920562 vs. ExPASy Swiss-Prot
Match: NDUV1_DICDI (NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial OS=Dictyostelium discoideum GN=ndufv1 PE=2 SV=1) HSP 1 Score: 378.637 bits (971), Expect = 1.805e-104 Identity = 179/241 (74.27%), Postives = 203/241 (84.23%), Query Frame = 3 Query: 3 DRIFTNLHGLHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFPSGLKWSFMPKV-SDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKTILVQNCLCV 722 DRIFTNL+G HD +LKGA+ RGDW++TK+++ KG DWI+ E+ SGLRGRGGAGFPSGLKWSFMPK S RP YLV+NADE EPGTCKDREIMRHDPHKL+EGCL+AG MRA AAYIYIRGE+ E K LE+A EAY AGL+G+NACG+GY FDV++H GAGAYICGEETAL+ES+EGKQGKPRLKPPFPA AGLYGCPTTVTNVETVAV+PTILRRG WFASFGR C+ Sbjct: 55 DRIFTNLYGEHDVYLKGAIARGDWYKTKNIIDKGKDWILKEMMASGLRGRGGAGFPSGLKWSFMPKTTSKDRPQYLVINADEGEPGTCKDREIMRHDPHKLIEGCLLAGFAMRACAAYIYIRGEFHYEAKVLEQAIDEAYKAGLIGENACGTGYKFDVYVHRGAGAYICGEETALIESIEGKQGKPRLKPPFPAMAGLYGCPTTVTNVETVAVAPTILRRGGAWFASFGRPKNAGTKLFCI 295
BLAST of FC920562 vs. ExPASy Swiss-Prot
Match: NDUV1_BOVIN (NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial OS=Bos taurus GN=NDUFV1 PE=1 SV=2) HSP 1 Score: 377.867 bits (969), Expect = 3.079e-104 Identity = 177/230 (76.96%), Postives = 199/230 (86.52%), Query Frame = 3 Query: 3 DRIFTNLHGLHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRK 692 DRIFTNL+G HD LKGA RGDW++TK+++LKG DWI+ EVK SGLRGRGGAGFP+GLKWSFM K SDGRP YLVVNADE EPGTCKDREI+RHDPHKL+EGCL+ G M A AAYIYIRGE+ NE NL+ A +EAY AGL+GKNACGSGYDFDV + GAGAYICGEETAL+ES+EGKQGKPRLKPPFPA+ G++GCPTTV NVETVAVSPTI RRG WFASFGR+ Sbjct: 39 DRIFTNLYGRHDWRLKGAQSRGDWYKTKEILLKGPDWILGEVKTSGLRGRGGAGFPTGLKWSFMNKPSDGRPKYLVVNADEGEPGTCKDREIIRHDPHKLVEGCLVGGRAMGARAAYIYIRGEFYNEASNLQVAIREAYEAGLIGKNACGSGYDFDVFVVRGAGAYICGEETALIESIEGKQGKPRLKPPFPADVGVFGCPTTVANVETVAVSPTICRRGGAWFASFGRE 268
BLAST of FC920562 vs. ExPASy Swiss-Prot
Match: NDUV1_HUMAN (NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial OS=Homo sapiens GN=NDUFV1 PE=1 SV=4) HSP 1 Score: 377.481 bits (968), Expect = 4.021e-104 Identity = 175/230 (76.09%), Postives = 199/230 (86.52%), Query Frame = 3 Query: 3 DRIFTNLHGLHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRK 692 DRIFTNL+G HD LKG++ RGDW++TK+++LKG DWI+ E+K SGLRGRGGAGFP+GLKWSFM K SDGRP YLVVNADE EPGTCKDREI+RHDPHKLLEGCL+ G M A AAYIYIRGE+ NE NL+ A +EAY AGL+GKNACGSGYDFDV + GAGAYICGEETAL+ES+EGKQGKPRLKPPFPA+ G++GCPTTV NVETVAVSPTI RRG WFA FGR+ Sbjct: 39 DRIFTNLYGRHDWRLKGSLSRGDWYKTKEILLKGPDWILGEIKTSGLRGRGGAGFPTGLKWSFMNKPSDGRPKYLVVNADEGEPGTCKDREILRHDPHKLLEGCLVGGRAMGARAAYIYIRGEFYNEASNLQVAIREAYEAGLIGKNACGSGYDFDVFVVRGAGAYICGEETALIESIEGKQGKPRLKPPFPADVGVFGCPTTVANVETVAVSPTICRRGGTWFAGFGRE 268
BLAST of FC920562 vs. ExPASy Swiss-Prot
Match: NDUV1_PONPY (NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial OS=Pongo pygmaeus GN=NDUFV1 PE=2 SV=1) HSP 1 Score: 377.096 bits (967), Expect = 5.252e-104 Identity = 175/230 (76.09%), Postives = 199/230 (86.52%), Query Frame = 3 Query: 3 DRIFTNLHGLHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRK 692 DRIFTNL+G HD LKGA+ RGDW++TK+++LKG DWI+ E+K SGLRGRGGAGFP+GLKWSFM K SDGRP YLVVNADE EPGTCKDREI+RHDPHKL+EGCL+ G M A AAYIYIRGE+ NE NL+ A +EAY AGL+GKNACGSGYDFDV + GAGAYICGEETAL+ES+EGKQGKPRLKPPFPA+ G++GCPTTV NVETVAVSPTI RRG WFA FGR+ Sbjct: 39 DRIFTNLYGRHDWRLKGALSRGDWYKTKEILLKGPDWILGEIKTSGLRGRGGAGFPTGLKWSFMNKPSDGRPKYLVVNADEGEPGTCKDREIIRHDPHKLVEGCLVGGRAMGARAAYIYIRGEFYNEASNLQVAIREAYEAGLIGKNACGSGYDFDVFVVRGAGAYICGEETALIESIEGKQGKPRLKPPFPADVGVFGCPTTVANVETVAVSPTICRRGGTWFAGFGRE 268
BLAST of FC920562 vs. ExPASy Swiss-Prot
Match: NDUV1_MACFA (NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial OS=Macaca fascicularis GN=NDUFV1 PE=2 SV=1) HSP 1 Score: 377.096 bits (967), Expect = 5.252e-104 Identity = 175/230 (76.09%), Postives = 199/230 (86.52%), Query Frame = 3 Query: 3 DRIFTNLHGLHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRK 692 DRIFTNL+G HD LKGA+ RGDW++TK+++LKG DWI+ E+K SGLRGRGGAGFP+GLKWSFM K SDGRP YLVVNADE EPGTCKDREI+RHDPHKL+EGCL+ G M A AAYIYIRGE+ NE NL+ A +EAY AGL+GKNACGSGYDFDV + GAGAYICGEETAL+ES+EGKQGKPRLKPPFPA+ G++GCPTTV NVETVAVSPTI RRG WFA FGR+ Sbjct: 39 DRIFTNLYGRHDWRLKGALSRGDWYKTKEILLKGPDWILGEIKTSGLRGRGGAGFPTGLKWSFMNKPSDGRPKYLVVNADEGEPGTCKDREIIRHDPHKLVEGCLVGGRAMGARAAYIYIRGEFYNEASNLQVAIREAYEAGLIGKNACGSGYDFDVFVVRGAGAYICGEETALIESIEGKQGKPRLKPPFPADVGVFGCPTTVANVETVAVSPTICRRGGTWFAGFGRE 268
BLAST of FC920562 vs. ExPASy Swiss-Prot
Match: NDUV1_PANTR (NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial OS=Pan troglodytes GN=NDUFV1 PE=2 SV=1) HSP 1 Score: 376.326 bits (965), Expect = 8.959e-104 Identity = 174/230 (75.65%), Postives = 199/230 (86.52%), Query Frame = 3 Query: 3 DRIFTNLHGLHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRK 692 DRIFTNL+G HD LKG++ RGDW++TK+++LKG DWI+ E+K SGLRGRGGAGFP+GLKWSFM K SDGRP YLVVNADE EPGTCKDREI+RHDPHKL+EGCL+ G M A AAYIYIRGE+ NE NL+ A +EAY AGL+GKNACGSGYDFDV + GAGAYICGEETAL+ES+EGKQGKPRLKPPFPA+ G++GCPTTV NVETVAVSPTI RRG WFA FGR+ Sbjct: 39 DRIFTNLYGRHDWRLKGSLSRGDWYKTKEILLKGPDWILGEIKTSGLRGRGGAGFPTGLKWSFMNKPSDGRPKYLVVNADEGEPGTCKDREILRHDPHKLVEGCLVGGRAMGARAAYIYIRGEFYNEASNLQVAIREAYEAGLIGKNACGSGYDFDVFVVRGAGAYICGEETALIESIEGKQGKPRLKPPFPADVGVFGCPTTVANVETVAVSPTICRRGGTWFAGFGRE 268
BLAST of FC920562 vs. ExPASy Swiss-Prot
Match: NDUV1_GORGO (NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial OS=Gorilla gorilla gorilla GN=NDUFV1 PE=2 SV=1) HSP 1 Score: 376.326 bits (965), Expect = 8.959e-104 Identity = 174/230 (75.65%), Postives = 199/230 (86.52%), Query Frame = 3 Query: 3 DRIFTNLHGLHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRK 692 DRIFTNL+G HD LKGA+ RGDW++TK+++LKG DWI+ E+K SGLRGRGGAGFP+GLKWSFM K SDGRP YLVVNADE EPGTCKDREI+RHDPHKL+EGCL+ G M A AAYIYIRGE+ NE NL+ A +EAY AGL+GKNACGSGYDFDV + GAGAYICGEETAL+ES+EGKQGKPRLKPPFPA+ G++GCPTTV NVETVAVSPTI RRG WF+ FGR+ Sbjct: 39 DRIFTNLYGRHDWRLKGALSRGDWYKTKEILLKGPDWILGEIKTSGLRGRGGAGFPTGLKWSFMNKPSDGRPKYLVVNADEGEPGTCKDREILRHDPHKLVEGCLVGGRAMGARAAYIYIRGEFYNEASNLQVAIREAYEAGLIGKNACGSGYDFDVFVVRGAGAYICGEETALIESIEGKQGKPRLKPPFPADVGVFGCPTTVANVETVAVSPTICRRGGTWFSGFGRE 268
BLAST of FC920562 vs. ExPASy Swiss-Prot
Match: NDUV1_MOUSE (NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial OS=Mus musculus GN=Ndufv1 PE=1 SV=1) HSP 1 Score: 375.941 bits (964), Expect = 1.170e-103 Identity = 175/230 (76.09%), Postives = 199/230 (86.52%), Query Frame = 3 Query: 3 DRIFTNLHGLHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRK 692 DRIFTNL+G HD LKGA++RGDW++TK+++LKG DWI+ E+K SGLRGRGGAGFP+GLKWSFM K SDGRP YLVVNADE EPGTCKDREIMRHDPHKL+EGCL+ G M A AAYIYIRGE+ NE NL+ A +EAY AGL+GKNACGS YDFDV + GAGAYICGEETAL+ES+EGKQGKPRLKPPFPA+ G++GCPTTV NVETVAVSPTI RRG WFA FGR+ Sbjct: 39 DRIFTNLYGRHDWRLKGALRRGDWYKTKEILLKGPDWILGEMKTSGLRGRGGAGFPTGLKWSFMNKPSDGRPKYLVVNADEGEPGTCKDREIMRHDPHKLVEGCLVGGRAMGARAAYIYIRGEFYNEASNLQVAIREAYEAGLIGKNACGSDYDFDVFVVRGAGAYICGEETALIESIEGKQGKPRLKPPFPADVGVFGCPTTVANVETVAVSPTICRRGGTWFAGFGRE 268
BLAST of FC920562 vs. ExPASy Swiss-Prot
Match: NUOF_RHOCA (NADH-quinone oxidoreductase subunit F OS=Rhodobacter capsulatus GN=nuoF PE=3 SV=1) HSP 1 Score: 362.459 bits (929), Expect = 1.339e-99 Identity = 169/229 (73.80%), Postives = 192/229 (83.84%), Query Frame = 3 Query: 3 DRIFTNLHGLHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGR 689 DRIFTN++G+HD LKGAM RG W T ++ G DWI+ +VK SGLRGRGGAGFP+GLKWSFMPK SDGRPS+LV+NADESEPGTCKDREIMRHDPH L+EG LIAG M A AAYIYIRGEYV E++ L+ A E Y AGL+GKNAC S YDFDV++H+GAGAYICGEETALLESLEGK+G PR+KPPFPA +GLYGCPTTV NVE++AV PTILRRG WFA GR Sbjct: 6 DRIFTNIYGMHDRSLKGAMARGHWDGTAAILGNGRDWIIEQVKASGLRGRGGAGFPTGLKWSFMPKQSDGRPSFLVINADESEPGTCKDREIMRHDPHTLIEGALIAGFAMGARAAYIYIRGEYVREKEALQAAIDECYEAGLIGKNACRSDYDFDVYLHHGAGAYICGEETALLESLEGKKGMPRMKPPFPAGSGLYGCPTTVNNVESIAVVPTILRRGGAWFAGIGR 234
BLAST of FC920562 vs. ExPASy Swiss-Prot
Match: NUOF1_RHIME (NADH-quinone oxidoreductase subunit F 1 OS=Rhizobium meliloti GN=nuoF1 PE=3 SV=1) HSP 1 Score: 357.066 bits (915), Expect = 5.625e-98 Identity = 167/229 (72.93%), Postives = 191/229 (83.41%), Query Frame = 3 Query: 3 DRIFTNLHGLHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGR 689 DRIFTN++GL D L+GAM RG W TK + KG DWI+NEVK SGLRGRGGAGFP+GLKWSFMPK SDGRP YLVVNADESEPGTCKDR+IMRHDPH L+EGC+IA M A AAYIY+RGE++ ER+ L+ A E Y GLLGKN GYD D+++H+GAGAYICGEETALLESLEGK+G+PRLKPPFPAN GLYGCPTTV NVE++AV+PTILRRG W+ SFGR Sbjct: 6 DRIFTNIYGLKDKSLRGAMARGHWDGTKQFLEKGRDWIINEVKASGLRGRGGAGFPTGLKWSFMPKESDGRPHYLVVNADESEPGTCKDRDIMRHDPHTLIEGCVIASFAMGAHAAYIYVRGEFIREREALQAAIDECYEYGLLGKNN-KLGYDIDIYVHHGAGAYICGEETALLESLEGKKGQPRLKPPFPANMGLYGCPTTVNNVESIAVTPTILRRGAGWYTSFGR 233 The following BLAST results are available for this feature:
BLAST of FC920562 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 37
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920562 ID=FC920562; Name=FC920562; organism=Citrus clementina; type=EST; length=725bpback to top |