FC920562
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC920562 vs. ExPASy Swiss-Prot
Match: NUOF_SALTY (NADH-quinone oxidoreductase subunit F OS=Salmonella typhimurium GN=nuoF PE=3 SV=2) HSP 1 Score: 220.705 bits (561), Expect = 6.291e-57 Identity = 109/210 (51.90%), Postives = 140/210 (66.67%), Query Frame = 3 Query: 60 KRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGR 689 K G K L D IV++VK +GL+GRGGAGF +GLKWS MPK YL+ NADE EPGT KDR +M PH L+EG LI+ ++A YI++RGEY+ +L RA EA AGLLGKN G+G+DF++ +H GAG YICGEETAL+ SLEG++ PR KPPFPA +G++G PT V NVET+ P IL G +W+ + + Sbjct: 32 KNGYEGARKALTGLSPDEIVSQVKDAGLKGRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVHLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALINSLEGRRANPRSKPPFPATSGVWGKPTCVNNVETLCNVPAILANGVEWYQNISK 241
BLAST of FC920562 vs. ExPASy Swiss-Prot
Match: NUOF_BUCBP (NADH-quinone oxidoreductase subunit F OS=Buchnera aphidicola subsp. Baizongia pistaciae GN=nuoF PE=3 SV=1) HSP 1 Score: 211.846 bits (538), Expect = 2.922e-54 Identity = 102/194 (52.58%), Postives = 134/194 (69.07%), Query Frame = 3 Query: 114 IVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSD--GRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGR 689 +++ +K+SGL+GRGGAGF +GLKWS MP ++D G YL+ NADE EPGT KDR +M PH+LLEG LI+ + + +YI++RGEYVN + L+++ EA G LGKN CGS F++ IH GAG YICGEETAL+ SLEG++ PR KPPFPA GL+G PT V NVET++ P I G W+ + Sbjct: 51 VIDLIKQSGLKGRGGAGFLTGLKWSLMPPLNDEYGYTRYLLCNADEMEPGTYKDRFLMEKVPHQLLEGILISAFALSVTKSYIFLRGEYVNTERILKQSIIEATNYGYLGKNVCGSNLTFEIFIHTGAGRYICGEETALINSLEGRRANPRFKPPFPAYVGLWGKPTCVNNVETLSNVPAIFLNGVKWYKGLSK 244
BLAST of FC920562 vs. ExPASy Swiss-Prot
Match: NUOF_AQUAE (NADH-quinone oxidoreductase subunit F OS=Aquifex aeolicus GN=nuoF PE=3 SV=1) HSP 1 Score: 209.534 bits (532), Expect = 1.450e-53 Identity = 108/210 (51.43%), Postives = 138/210 (65.71%), Query Frame = 3 Query: 57 MKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFG 686 +K G + + + + I++ V KS LRGRGGAGFP+G KW F V + P Y + NADESEPGT KDR I+ DPH L+EG +I+ + A+ AYIYIRGEY L A +EA G LGKN GSG+D ++++ GAGAYICGEETAL+ESLEGK+G PRLKPP+P GL+G PT V NVET+A P I+ G + + G Sbjct: 35 LKDGGYQALEKALNMSPEEIIDWVDKSTLRGRGGAGFPTGKKWKFA--VQNPGPRYFICNADESEPGTFKDRIIIERDPHLLIEGIIISSYAIGANEAYIYIRGEYPAGYYILRDAIEEAKKKGFLGKNILGSGFDLEIYVARGAGAYICGEETALIESLEGKRGHPRLKPPYPVQKGLWGKPTVVNNVETIANVPFIISMGWEEYRYIG 242
BLAST of FC920562 vs. ExPASy Swiss-Prot
Match: NUOF_BUCAP (NADH-quinone oxidoreductase subunit F OS=Buchnera aphidicola subsp. Schizaphis graminum GN=nuoF PE=3 SV=1) HSP 1 Score: 208.764 bits (530), Expect = 2.474e-53 Identity = 100/212 (47.17%), Postives = 141/212 (66.51%), Query Frame = 3 Query: 60 KRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKT 695 K G + K L + +V+ +K+SGL+GRGGAGF +GLKWS M K + + YL+ NADE EPGT KDR +M + PH+L+EG L++ + S YI++RGEY+ L+++ QEA G +G N SG++F++ +H GAG YICGEETAL+ SLEG++ PR KPPFPA GL+G PT V NVET++ P+I+ G +W+ + T Sbjct: 32 KNGYFSLKKALKTMCPEDVVHLIKESGLKGRGGAGFSTGLKWSLMSKDNSSKIRYLLCNADEMEPGTYKDRFLMENIPHQLIEGMLLSAFALNVSRGYIFLRGEYIKAEYILKKSIQEAINFGFIGSNILNSGFNFELFLHTGAGRYICGEETALINSLEGRRANPRAKPPFPAVFGLWGKPTCVNNVETLSNVPSIVLHGVNWYKKLSKST 243
BLAST of FC920562 vs. ExPASy Swiss-Prot
Match: NUOF_BUCAI (NADH-quinone oxidoreductase subunit F OS=Buchnera aphidicola subsp. Acyrthosiphon pisum GN=nuoF PE=3 SV=1) HSP 1 Score: 195.282 bits (495), Expect = 2.831e-49 Identity = 94/196 (47.96%), Postives = 131/196 (66.84%), Query Frame = 3 Query: 114 IVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSD--GRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGRKT 695 ++N VK+SGL+GRGGAGF +GLKWS M + YL+ NADE EPGT KDR ++ PH+L+EG +++ + S AYI++RGEYV L+++ QEA G +G N GS ++ ++ +H GAG YICGEETAL+ SLEG++ PR KPPFPA GL+G PT V NVET++ P I+ G W+ + + + Sbjct: 50 VINIVKESGLKGRGGAGFSTGLKWSLMSQNHSYTRERGYLICNADEMEPGTYKDRLLIEKIPHQLIEGIILSAYALNVSRAYIFLRGEYVQAEHILKQSIQEAINFGFIGLNILGSNFNIELVLHTGAGRYICGEETALINSLEGRRANPRSKPPFPAVFGLWGKPTCVNNVETLSNVPCIILNGVSWYKNLSKSS 245
BLAST of FC920562 vs. ExPASy Swiss-Prot
Match: HOXF_RALEH (NAD-reducing hydrogenase hoxS subunit alpha OS=Ralstonia eutropha (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=hoxF PE=1 SV=1) HSP 1 Score: 182.956 bits (463), Expect = 1.454e-45 Identity = 94/200 (47.00%), Postives = 125/200 (62.50%), Query Frame = 3 Query: 90 LVLKGADWIVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACG-SGYDFDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFG 686 L+LK + ++ + S LRGRGGAGF +GLKW + ++ Y++ NADE EPGT KDR ++ P K+ G +IA + +Y+RGEY + LER QE GLLG+ G +G+DFD+ I GAGAYICG+E+AL+ES EGK+G PR+KPPFP G G PT+V NVET A I+ G DWF + G Sbjct: 201 LLLK-PEQVIETIVDSRLRGRGGAGFSTGLKWRLC-RDAESEQKYVICNADEGEPGTFKDRVLLTRAPKKVFVGMVIAAYAIGCRKGIVYLRGEYFYLKDYLERQLQELREDGLLGRAIGGRAGFDFDIRIQMGAGAYICGDESALIESCEGKRGTPRVKPPFPVQQGYLGKPTSVNNVETFAAVSRIMEEGADWFRAMG 398
BLAST of FC920562 vs. ExPASy Swiss-Prot
Match: NDUV1_SCHPO (NADH-ubiquinone oxidoreductase 51 kDa subunit, mitochondrial OS=Schizosaccharomyces pombe GN=SPBC18E5.10 PE=2 SV=1) HSP 1 Score: 162.155 bits (409), Expect = 2.655e-39 Identity = 91/233 (39.06%), Postives = 141/233 (60.52%), Query Frame = 3 Query: 6 RIFTNLHGLHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSD---GRPS--YLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLERARQEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPDWFASFGR 689 R+F NL + A+ G++ +++ I+ V++S LRGRG GFP+G K + K + GR ++VNA E++ G+ KDR ++RH+PHK++EG +IA + ASA Y++IR +Y E +++ +AYA LLGKN G+ ++ IH GAG+YI GEE+AL++SL+G+ P + +GL+G PT V NVETV+ P I+++GP +F S GR Sbjct: 33 RMFPNLIEKRIRRIDDALADGEYENLSEILKYDPLNIIELVQESELRGRGRYGFPTGEKMLSLYKATSSERGRKEKPVVIVNAAENDIGSFKDRLLLRHEPHKIIEGAIIAARAVEASACYLFIRKDYYEETVMMQKCIIQAYAKKLLGKNLLGTSIGLELLIHPGAGSYITGEESALIQSLQGEFPVPDIPINNTITSGLFGLPTLVLNVETVSNLPAIIKKGPKFFISMGR 265 The following BLAST results are available for this feature:
BLAST of FC920562 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 37
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC920562 ID=FC920562; Name=FC920562; organism=Citrus clementina; type=EST; length=725bpback to top |