FC920609
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC920609 vs. ExPASy Swiss-Prot
Match: TAF9_SCHPO (Transcription initiation factor TFIID subunit 9 OS=Schizosaccharomyces pombe GN=taf9 PE=1 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 4.431e-20 Identity = 52/120 (43.33%), Postives = 76/120 (63.33%), Query Frame = 2 Query: 152 PRDAKIVKSLLKSMGVEDYEPRVIHQFLELWYRYVVDVLTDAQVYSEHA-GKNT-IDCDDVKLAVQSKVNSSFSQPPAREVLLELAKNRNKIPLPKSIAGRGIPLPPEQDTLISPNYQLS 505 P+D +++ +L S+GV Y V Q L +RY ++ D+QVY+EH+ G+N I +DV+LAV S++N SF+ PP +E LLELA RN+ PLP+ G LPPE+ L PN+ +S Sbjct: 14 PKDVRLIHLILSSLGVPSYSQTVPLQLLTFAHRYTQQLIQDSQVYAEHSRGQNAPISVEDVRLAVASQINHSFTGPPPKEFLLELAMERNRKPLPQIQPSYGFRLPPEKYCLTQPNWIVS 133
BLAST of FC920609 vs. ExPASy Swiss-Prot
Match: TAF9_YEAST (Transcription initiation factor TFIID subunit 9 OS=Saccharomyces cerevisiae GN=TAF9 PE=1 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.631e-14 Identity = 41/125 (32.80%), Postives = 70/125 (56.00%), Query Frame = 2 Query: 143 EDLPRDAKIVKSLLKSMGVEDYEPRVIHQFLELWYRYVVDVLTDAQVYSEHAGKNT-----IDCDDVKLAVQSKVNSSFSQPPAREVLLELAKNRNKIPLPKSIAGRGIPLPPEQDTLISPNYQL 502 E+ PRD +++ LL S + YE +V Q ++ +RY VL DA VY+++AG + +D++LA+ ++ F +E++L+LA RNK LP+ + G+ LPPE+ L + + L Sbjct: 27 EETPRDVRLLHLLLASQSIHQYEDQVPLQLMDFAHRYTQGVLKDALVYNDYAGSGNSAGSGLGVEDIRLAIAARTQYQFKPTAPKELMLQLAAERNKKALPQVMGTWGVRLPPEKYCLTAKEWDL 151 The following BLAST results are available for this feature:
BLAST of FC920609 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 12
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920609 ID=FC920609; Name=FC920609; organism=Citrus clementina; type=EST; length=697bpback to top |