FC920609
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC920609 vs. ExPASy Swiss-Prot
Match: TAF9B_RAT (Transcription initiation factor TFIID subunit 9B OS=Rattus norvegicus GN=Taf9b PE=2 SV=2) HSP 1 Score: 127.487 bits (319), Expect = 6.820e-29 Identity = 58/120 (48.33%), Postives = 85/120 (70.83%), Query Frame = 2 Query: 143 EDLPRDAKIVKSLLKSMGVEDYEPRVIHQFLELWYRYVVDVLTDAQVYSEHAGKNTIDCDDVKLAVQSKVNSSFSQPPAREVLLELAKNRNKIPLPKSIAGRGIPLPPEQDTLISPNYQL 502 ++ PRDA ++ +LK MG+ DYEPRVI+Q LE +RYV +L DA++YS HA K T+D DDV+LA+Q + + SF+ PP R+ LL++A+ +N+ PLP G LPP++ L +PNY+L Sbjct: 10 KNAPRDALVMAQILKDMGITDYEPRVINQMLEFAFRYVTTILDDAKIYSSHAKKPTVDADDVRLAIQCRADQSFTSPPPRDFLLDIARQKNQTPLPLIKPYAGPRLPPDRYCLTAPNYRL 129
BLAST of FC920609 vs. ExPASy Swiss-Prot
Match: TAF9_RAT (Transcription initiation factor TFIID subunit 9 OS=Rattus norvegicus GN=Taf9 PE=2 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 8.908e-29 Identity = 57/120 (47.50%), Postives = 86/120 (71.67%), Query Frame = 2 Query: 143 EDLPRDAKIVKSLLKSMGVEDYEPRVIHQFLELWYRYVVDVLTDAQVYSEHAGKNTIDCDDVKLAVQSKVNSSFSQPPAREVLLELAKNRNKIPLPKSIAGRGIPLPPEQDTLISPNYQL 502 + +P+DA+++ +LK MG+ +YEPRVI+Q LE +RYV +L DA++YS HA K T+D DDV+LA+Q + + SF+ PP R+ LL++A+ RN+ PLP G LPP++ L +PNY+L Sbjct: 10 KSMPKDAQMMAQILKDMGITEYEPRVINQMLEFAFRYVTTILDDAKIYSSHAKKPTVDADDVRLAIQCRADQSFTSPPPRDFLLDIARQRNQTPLPLIKPYSGPRLPPDRYCLTAPNYRL 129
BLAST of FC920609 vs. ExPASy Swiss-Prot
Match: TAF9_MOUSE (Transcription initiation factor TFIID subunit 9 OS=Mus musculus GN=Taf9 PE=2 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 8.908e-29 Identity = 57/120 (47.50%), Postives = 86/120 (71.67%), Query Frame = 2 Query: 143 EDLPRDAKIVKSLLKSMGVEDYEPRVIHQFLELWYRYVVDVLTDAQVYSEHAGKNTIDCDDVKLAVQSKVNSSFSQPPAREVLLELAKNRNKIPLPKSIAGRGIPLPPEQDTLISPNYQL 502 + +P+DA+++ +LK MG+ +YEPRVI+Q LE +RYV +L DA++YS HA K T+D DDV+LA+Q + + SF+ PP R+ LL++A+ RN+ PLP G LPP++ L +PNY+L Sbjct: 10 KSMPKDAQMMAQILKDMGITEYEPRVINQMLEFAFRYVTTILDDAKIYSSHAKKATVDADDVRLAIQCRADQSFTSPPPRDFLLDIARQRNQTPLPLIKPYSGPRLPPDRYCLTAPNYRL 129
BLAST of FC920609 vs. ExPASy Swiss-Prot
Match: TAF9_HUMAN (Transcription initiation factor TFIID subunit 9 OS=Homo sapiens GN=TAF9 PE=1 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 8.908e-29 Identity = 57/120 (47.50%), Postives = 86/120 (71.67%), Query Frame = 2 Query: 143 EDLPRDAKIVKSLLKSMGVEDYEPRVIHQFLELWYRYVVDVLTDAQVYSEHAGKNTIDCDDVKLAVQSKVNSSFSQPPAREVLLELAKNRNKIPLPKSIAGRGIPLPPEQDTLISPNYQL 502 + +P+DA+++ +LK MG+ +YEPRVI+Q LE +RYV +L DA++YS HA K T+D DDV+LA+Q + + SF+ PP R+ LL++A+ RN+ PLP G LPP++ L +PNY+L Sbjct: 10 KSMPKDAQMMAQILKDMGITEYEPRVINQMLEFAFRYVTTILDDAKIYSSHAKKATVDADDVRLAIQCRADQSFTSPPPRDFLLDIARQRNQTPLPLIKPYSGPRLPPDRYCLTAPNYRL 129
BLAST of FC920609 vs. ExPASy Swiss-Prot
Match: TAF9_BOVIN (Transcription initiation factor TFIID subunit 9 OS=Bos taurus GN=TAF9 PE=2 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 8.908e-29 Identity = 57/120 (47.50%), Postives = 86/120 (71.67%), Query Frame = 2 Query: 143 EDLPRDAKIVKSLLKSMGVEDYEPRVIHQFLELWYRYVVDVLTDAQVYSEHAGKNTIDCDDVKLAVQSKVNSSFSQPPAREVLLELAKNRNKIPLPKSIAGRGIPLPPEQDTLISPNYQL 502 + +P+DA+++ +LK MG+ +YEPRVI+Q LE +RYV +L DA++YS HA K T+D DDV+LA+Q + + SF+ PP R+ LL++A+ RN+ PLP G LPP++ L +PNY+L Sbjct: 10 KSMPKDAQMMAQILKDMGITEYEPRVINQMLEFAFRYVTTILDDAKIYSSHAKKATVDADDVRLAIQCRADQSFTSPPPRDFLLDIARQRNQTPLPLIKPYSGPRLPPDRYCLTAPNYRL 129
BLAST of FC920609 vs. ExPASy Swiss-Prot
Match: TAF9B_MOUSE (Transcription initiation factor TFIID subunit 9B OS=Mus musculus GN=Taf9b PE=1 SV=2) HSP 1 Score: 125.946 bits (315), Expect = 1.984e-28 Identity = 57/120 (47.50%), Postives = 85/120 (70.83%), Query Frame = 2 Query: 143 EDLPRDAKIVKSLLKSMGVEDYEPRVIHQFLELWYRYVVDVLTDAQVYSEHAGKNTIDCDDVKLAVQSKVNSSFSQPPAREVLLELAKNRNKIPLPKSIAGRGIPLPPEQDTLISPNYQL 502 ++ PRDA ++ +LK MG+ +YEPRVI+Q LE +RYV +L DA++YS HA K T+D DDV+LA+Q + + SF+ PP R+ LL++A+ +N+ PLP G LPP++ L +PNY+L Sbjct: 10 KNAPRDALVMAQILKDMGITEYEPRVINQMLEFAFRYVTTILDDAKIYSSHAKKPTVDADDVRLAIQCRADQSFTSPPPRDFLLDIARQKNQTPLPLIKPYAGPRLPPDRYCLTAPNYRL 129
BLAST of FC920609 vs. ExPASy Swiss-Prot
Match: TAF9B_PONAB (Transcription initiation factor TFIID subunit 9B OS=Pongo abelii GN=TAF9B PE=2 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 7.541e-28 Identity = 56/120 (46.67%), Postives = 84/120 (70.00%), Query Frame = 2 Query: 143 EDLPRDAKIVKSLLKSMGVEDYEPRVIHQFLELWYRYVVDVLTDAQVYSEHAGKNTIDCDDVKLAVQSKVNSSFSQPPAREVLLELAKNRNKIPLPKSIAGRGIPLPPEQDTLISPNYQL 502 ++ PRDA ++ +LK MG+ +YEPRVI+Q LE +RYV +L DA++YS HA K +D DDV+LA+Q + + SF+ PP R+ LL++A+ +N+ PLP G LPP++ L +PNY+L Sbjct: 10 KNAPRDALVMAQILKDMGITEYEPRVINQMLEFAFRYVTTILDDAKIYSSHAKKPNVDADDVRLAIQCRADQSFTSPPPRDFLLDIARQKNQTPLPLIKPYAGPRLPPDRYCLTAPNYRL 129
BLAST of FC920609 vs. ExPASy Swiss-Prot
Match: TAF9B_HUMAN (Transcription initiation factor TFIID subunit 9B OS=Homo sapiens GN=TAF9B PE=1 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 7.541e-28 Identity = 56/120 (46.67%), Postives = 84/120 (70.00%), Query Frame = 2 Query: 143 EDLPRDAKIVKSLLKSMGVEDYEPRVIHQFLELWYRYVVDVLTDAQVYSEHAGKNTIDCDDVKLAVQSKVNSSFSQPPAREVLLELAKNRNKIPLPKSIAGRGIPLPPEQDTLISPNYQL 502 ++ PRDA ++ +LK MG+ +YEPRVI+Q LE +RYV +L DA++YS HA K +D DDV+LA+Q + + SF+ PP R+ LL++A+ +N+ PLP G LPP++ L +PNY+L Sbjct: 10 KNAPRDALVMAQILKDMGITEYEPRVINQMLEFAFRYVTTILDDAKIYSSHAKKPNVDADDVRLAIQCRADQSFTSPPPRDFLLDIARQKNQTPLPLIKPYAGPRLPPDRYCLTAPNYRL 129
BLAST of FC920609 vs. ExPASy Swiss-Prot
Match: TAF9_DROME (Transcription initiation factor TFIID subunit 9 OS=Drosophila melanogaster GN=e(y)1 PE=1 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 1.331e-24 Identity = 54/118 (45.76%), Postives = 81/118 (68.64%), Query Frame = 2 Query: 149 LPRDAKIVKSLLKSMGVEDYEPRVIHQFLELWYRYVVDVLTDAQVYSEHAGKNTIDCDDVKLAVQSKVNSSFSQPPAREVLLELAKNRNKIPLPKSIAGRGIPLPPEQDTLISPNYQL 502 +P+DA+++ S+LK + V++YEPRV++Q LE +RYV +L DA+VY+ HA K TID DDV+LA + ++ SF+ P R VL ++A RN +PLP G+ LPP++ L NY+L Sbjct: 18 VPKDAQVIMSILKELNVQEYEPRVVNQLLEFTFRYVTCILDDAKVYANHARKKTIDLDDVRLATEVTLDKSFTGPLERHVLAKVADVRNSMPLPPIKPHCGLRLPPDRYCLTGVNYKL 135
BLAST of FC920609 vs. ExPASy Swiss-Prot
Match: TAF9_ENCCU (Transcription initiation factor TFIID subunit 9 OS=Encephalitozoon cuniculi GN=TAF9 PE=1 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 8.075e-22 Identity = 52/125 (41.60%), Postives = 77/125 (61.60%), Query Frame = 2 Query: 128 MADGDEDLPRDAKIVKSLLKSMGVEDYEPRVIHQFLELWYRYVVDVLTDAQVYSEHAGKNTIDCDDVKLAVQSKVNSSFSQPPAREVLLELAKNRNKIPLPKSIAGRGIPLPPEQDTLISPNYQL 502 MA G+ PRDAK++ +L+S+G+E+ EP+VI Q LE YRY DVL DA ++++H G+ I DVKLA+Q+KV F PP R+ L E++ N PL I +PP L++ +Y++ Sbjct: 1 MASGENLAPRDAKVISVILRSLGIEECEPKVIIQLLEFAYRYTTDVLEDALLFAKHTGRTHITTSDVKLALQTKVGRHFVPPPPRQYLSEISTMVNSKPLTIPDGENLIRVPPSSSALLNLDYEV 125 The following BLAST results are available for this feature:
BLAST of FC920609 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 12
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920609 ID=FC920609; Name=FC920609; organism=Citrus clementina; type=EST; length=697bpback to top |