FC920897
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC920897 vs. ExPASy Swiss-Prot
Match: DED1_ASPOR (ATP-dependent RNA helicase ded1 OS=Aspergillus oryzae GN=ded1 PE=3 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 8.029e-30 Identity = 78/200 (39.00%), Postives = 116/200 (58.00%), Query Frame = 3 Query: 75 PFCLIVCPSRELARQTYEVVEQFLTPMRDAGYPDLRTLLCIGGVDMRSQLEVVKRGVHIVVATPGRLKDMLAKKKMNLDNCRYLTLDEADRLVDLGFEDDIREVFD-----HFKAQRQTLLFSATMPTKIQNFARSALVKPVTVNVGRAGAANLDVIQEVEYVKQEAKIVYLLECLQK--TPPPVLIFCENRLMLTTFTN 653 P LI+ P+REL Q ++ +F A +R + GG D+ SQL ++RG ++VATPGRL D++ + +++L N +YL LDEADR++D+GFE IR + + H RQTL+FSAT P IQ AR L V ++VGR G+ + ++ Q+VEYV+ K LL+ L T LIF E + M + ++ Sbjct: 274 PTSLILAPTRELVSQIFDEARKF------AYRSWVRPCVVYGGADIGSQLRQIERGCDLLVATPGRLVDLIERGRISLVNIKYLILDEADRMLDMGFEPQIRRIVEGEDMPHVN-DRQTLMFSATFPRDIQMLARDFLKDYVFLSVGRVGSTSENITQKVEYVEDHDKRSVLLDILHTHGTSGLTLIFVETKRMADSLSD 466 HSP 2 Score: 25.7942 bits (55), Expect = 8.029e-30 Identity = 10/21 (47.62%), Postives = 14/21 (66.67%), Query Frame = 1 Query: 664 ERIEAVAVHGGKDQEEREYAI 726 +R A A+HG + Q ERE A+ Sbjct: 471 QRFPATAIHGDRTQRERERAL 491
BLAST of FC920897 vs. ExPASy Swiss-Prot
Match: DED1_ASPTN (ATP-dependent RNA helicase ded1 OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) GN=ded1 PE=3 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 8.029e-30 Identity = 78/200 (39.00%), Postives = 116/200 (58.00%), Query Frame = 3 Query: 75 PFCLIVCPSRELARQTYEVVEQFLTPMRDAGYPDLRTLLCIGGVDMRSQLEVVKRGVHIVVATPGRLKDMLAKKKMNLDNCRYLTLDEADRLVDLGFEDDIREVFD-----HFKAQRQTLLFSATMPTKIQNFARSALVKPVTVNVGRAGAANLDVIQEVEYVKQEAKIVYLLECLQK--TPPPVLIFCENRLMLTTFTN 653 P LI+ P+REL Q ++ +F A +R + GG D+ SQL ++RG ++VATPGRL D++ + +++L N +YL LDEADR++D+GFE IR + + H RQTL+FSAT P IQ AR L V ++VGR G+ + ++ Q+VEYV+ K LL+ L T LIF E + M + ++ Sbjct: 274 PTSLILAPTRELVSQIFDEARKF------AYRSWVRPCVVYGGADIGSQLRQIERGCDLLVATPGRLVDLIERGRISLVNIKYLILDEADRMLDMGFEPQIRRIVEGEDMPHVN-DRQTLMFSATFPRDIQMLARDFLKDYVFLSVGRVGSTSENITQKVEYVEDHDKRSVLLDILHTHGTSGLTLIFVETKRMADSLSD 466 HSP 2 Score: 25.7942 bits (55), Expect = 8.029e-30 Identity = 10/21 (47.62%), Postives = 14/21 (66.67%), Query Frame = 1 Query: 664 ERIEAVAVHGGKDQEEREYAI 726 +R A A+HG + Q ERE A+ Sbjct: 471 QRFPATAIHGDRTQRERERAL 491
BLAST of FC920897 vs. ExPASy Swiss-Prot
Match: RH37_ORYSJ (DEAD-box ATP-dependent RNA helicase 37 OS=Oryza sativa subsp. japonica GN=PL10A PE=2 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 8.035e-30 Identity = 69/175 (39.43%), Postives = 105/175 (60.00%), Query Frame = 3 Query: 75 PFCLIVCPSRELARQTYEVVEQFLTPMRDAGYPDLRTLLCIGGVDMRSQLEVVKRGVHIVVATPGRLKDMLAKKKMNLDNCRYLTLDEADRLVDLGFEDDIREVFDHF----KAQRQTLLFSATMPTKIQNFARSALVKPVTVNVGRAGAANLDVIQEVEYVKQEAKIVYLLECL 587 P LI+ P+REL+ Q +E +F A +R ++ GG + QL ++RGV I+VATPGRL D+L + +++L +YL LDEADR++D+GFE IR++ + + RQT+LFSAT P +IQ A L + + VGR G++ + Q VE+V + K YL++ L Sbjct: 253 PLALILSPTRELSVQIHEEARKF------AYQTGVRVVVAYGGAPIHQQLRELERGVEILVATPGRLMDLLERARVSLQMVKYLALDEADRMLDMGFEPQIRKIVEQMDMPPRGVRQTMLFSATFPKEIQRMASDFLADYIFLAVGRVGSSTDLIAQRVEFVLEADKRSYLMDLL 421 HSP 2 Score: 27.7202 bits (60), Expect = 8.035e-30 Identity = 10/19 (52.63%), Postives = 15/19 (78.95%), Query Frame = 1 Query: 676 AVAVHGGKDQEEREYAISS 732 A ++HG + Q+EREYA+ S Sbjct: 460 ATSIHGDRTQQEREYALRS 478
BLAST of FC920897 vs. ExPASy Swiss-Prot
Match: DDX42_PONAB (ATP-dependent RNA helicase DDX42 OS=Pongo abelii GN=DDX42 PE=2 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 8.764e-30 Identity = 72/160 (45.00%), Postives = 94/160 (58.75%), Query Frame = 3 Query: 63 PGEGPFCLIVCPSRELARQTYEVVEQFLTPMRDAGYPDLRTLLCIGGVDMRSQLEVVKRGVHIVVATPGRLKDMLAKKKMNLDNCRYLTLDEADRLVDLGFEDDIREVFDHFKAQRQTLLFSATMPTKIQNFARSALVKPVTVNVGRAGAANLDVIQEVE 542 PG+GP +IVCP+REL +Q + ++F Y +LR++ GG M Q + ++ G IVV TPGRL D + KK NL YL DEADR+ D+GFE +R + H + RQTLLFSAT KI+ AR L+ P+ V G G AN DV Q VE Sbjct: 323 PGDGPIAVIVCPTRELCQQIHAEGKRF-----GKAY-NLRSVAVYGGGSMWEQAKALQEGAEIVVCTPGRLIDHVKKKATNLQRVSYLVFDEADRMFDMGFEYQVRSIASHVRPDRQTLLFSATFRKKIEKLARDILIDPIRVVQGDIGEANEDVTQIVE 476
BLAST of FC920897 vs. ExPASy Swiss-Prot
Match: DDX3Y_HUMAN (ATP-dependent RNA helicase DDX3Y OS=Homo sapiens GN=DDX3Y PE=1 SV=2) HSP 1 Score: 130.568 bits (327), Expect = 8.764e-30 Identity = 75/191 (39.27%), Postives = 113/191 (59.16%), Query Frame = 3 Query: 75 PFCLIVCPSRELARQTYEVVEQFLTPMRDAGYPDLRTLLCIGGVDMRSQLEVVKRGVHIVVATPGRLKDMLAKKKMNLDNCRYLTLDEADRLVDLGFEDDIREVFDHF----KAQRQTLLFSATMPTKIQNFARSALVKPVTVNVGRAGAANLDVIQEVEYVKQEAKIVYLLECLQKTPPP--VLIFCENR 629 P L++ P+RELA Q YE +F R +R + GG D+ Q+ ++RG H++VATPGRL DM+ + K+ LD C+YL LDEADR++D+GFE IR + + K R T++FSAT P +IQ AR L + + + VGR G+ + ++ Q+V +V+ K +LL+ L T L+F E + Sbjct: 265 PISLVLAPTRELAVQIYEEARKFSYRSR------VRPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKYLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLAVGRVGSTSENITQKVVWVEDLDKRSFLLDILGATGSDSLTLVFVETK 449
BLAST of FC920897 vs. ExPASy Swiss-Prot
Match: DDX3X_MOUSE (ATP-dependent RNA helicase DDX3X OS=Mus musculus GN=Ddx3x PE=1 SV=3) HSP 1 Score: 130.568 bits (327), Expect = 8.764e-30 Identity = 74/191 (38.74%), Postives = 114/191 (59.69%), Query Frame = 3 Query: 75 PFCLIVCPSRELARQTYEVVEQFLTPMRDAGYPDLRTLLCIGGVDMRSQLEVVKRGVHIVVATPGRLKDMLAKKKMNLDNCRYLTLDEADRLVDLGFEDDIREVFDHF----KAQRQTLLFSATMPTKIQNFARSALVKPVTVNVGRAGAANLDVIQEVEYVKQEAKIVYLLECLQKTPPP--VLIFCENR 629 P L++ P+RELA Q YE +F R +R + GG ++ Q+ ++RG H++VATPGRL DM+ + K+ LD C+YL LDEADR++D+GFE IR + + K R T++FSAT P +IQ AR L + + + VGR G+ + ++ Q+V +V++ K +LL+ L T L+F E + Sbjct: 267 PISLVLAPTRELAVQIYEEARKFSYRSR------VRPCVVYGGAEIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKYLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLAVGRVGSTSENITQKVVWVEEIDKRSFLLDLLNATGKDSLTLVFVETK 451
BLAST of FC920897 vs. ExPASy Swiss-Prot
Match: DED1_YEAST (ATP-dependent RNA helicase DED1 OS=Saccharomyces cerevisiae GN=DED1 PE=1 SV=2) HSP 1 Score: 125.561 bits (314), Expect = 1.047e-29 Identity = 74/198 (37.37%), Postives = 116/198 (58.59%), Query Frame = 3 Query: 75 PFCLIVCPSRELARQTYEVVEQFLTPMRDAGYPDLRTLLCIGGVDMRSQLEVVKRGVHIVVATPGRLKDMLAKKKMNLDNCRYLTLDEADRLVDLGFEDDIREVFDHFK----AQRQTLLFSATMPTKIQNFARSALVKPVTVNVGRAGAANLDVIQEVEYVKQEAKIVYLLECLQ-KTPPPVLIFCENRLMLTTFTN 653 P +I+ P+RELA Q ++ ++F ++ + GG + +QL ++RG ++VATPGRL D+L + K++L N +YL LDEADR++D+GFE IR + + +RQTL+FSAT P IQ+ AR L + ++VGR G+ + ++ Q+V YV+ + K LL+ L T LIF E + M T+ Sbjct: 226 PTAVIMAPTRELATQIFDEAKKFTYRSW------VKACVVYGGSPIGNQLREIERGCDLLVATPGRLNDLLERGKISLANVKYLVLDEADRMLDMGFEPQIRHIVEDCDMTPVGERQTLMFSATFPADIQHLARDFLSDYIFLSVGRVGSTSENITQKVLYVENQDKKSALLDLLSASTDGLTLIFVETKRMADQLTD 417 HSP 2 Score: 25.7942 bits (55), Expect = 1.047e-29 Identity = 9/24 (37.50%), Postives = 16/24 (66.67%), Query Frame = 1 Query: 661 LERIEAVAVHGGKDQEEREYAISS 732 ++ A A+HG + Q ERE A+++ Sbjct: 421 MQNFRATAIHGDRTQSERERALAA 444
BLAST of FC920897 vs. ExPASy Swiss-Prot
Match: DED1_YEAS7 (ATP-dependent RNA helicase DED1 OS=Saccharomyces cerevisiae (strain YJM789) GN=DED1 PE=3 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 1.047e-29 Identity = 74/198 (37.37%), Postives = 116/198 (58.59%), Query Frame = 3 Query: 75 PFCLIVCPSRELARQTYEVVEQFLTPMRDAGYPDLRTLLCIGGVDMRSQLEVVKRGVHIVVATPGRLKDMLAKKKMNLDNCRYLTLDEADRLVDLGFEDDIREVFDHFK----AQRQTLLFSATMPTKIQNFARSALVKPVTVNVGRAGAANLDVIQEVEYVKQEAKIVYLLECLQ-KTPPPVLIFCENRLMLTTFTN 653 P +I+ P+RELA Q ++ ++F ++ + GG + +QL ++RG ++VATPGRL D+L + K++L N +YL LDEADR++D+GFE IR + + +RQTL+FSAT P IQ+ AR L + ++VGR G+ + ++ Q+V YV+ + K LL+ L T LIF E + M T+ Sbjct: 226 PTAVIMAPTRELATQIFDEAKKFTYRSW------VKACVVYGGSPIGNQLREIERGCDLLVATPGRLNDLLERGKISLANVKYLVLDEADRMLDMGFEPQIRHIVEDCDMTPVGERQTLMFSATFPADIQHLARDFLSDYIFLSVGRVGSTSENITQKVLYVENQDKKSALLDLLSASTDGLTLIFVETKRMADQLTD 417 HSP 2 Score: 25.7942 bits (55), Expect = 1.047e-29 Identity = 9/24 (37.50%), Postives = 16/24 (66.67%), Query Frame = 1 Query: 661 LERIEAVAVHGGKDQEEREYAISS 732 ++ A A+HG + Q ERE A+++ Sbjct: 421 MQNFRATAIHGDRTQSERERALAA 444
BLAST of FC920897 vs. ExPASy Swiss-Prot
Match: DDX42_XENLA (ATP-dependent RNA helicase DDX42 OS=Xenopus laevis GN=ddx42 PE=2 SV=1) HSP 1 Score: 130.183 bits (326), Expect = 1.145e-29 Identity = 71/160 (44.38%), Postives = 94/160 (58.75%), Query Frame = 3 Query: 63 PGEGPFCLIVCPSRELARQTYEVVEQFLTPMRDAGYPDLRTLLCIGGVDMRSQLEVVKRGVHIVVATPGRLKDMLAKKKMNLDNCRYLTLDEADRLVDLGFEDDIREVFDHFKAQRQTLLFSATMPTKIQNFARSALVKPVTVNVGRAGAANLDVIQEVE 542 P +GP +IVCP+REL +Q + ++F Y +LR++ GG M Q + ++ G IVV TPGRL D + KK NL YL DEADR+ D+GFE +R + +H + RQTLLFSAT KI+ AR LV P+ V G G AN D+ Q VE Sbjct: 320 PADGPIAVIVCPTRELCQQIHSECKRF-----GKAY-NLRSVAVYGGGSMWEQAKALQEGAEIVVCTPGRLIDHVKKKATNLQRVTYLVFDEADRMFDMGFEYQVRSIANHVRPDRQTLLFSATFRKKIEKLARDILVDPIRVVQGDIGEANEDITQVVE 473
BLAST of FC920897 vs. ExPASy Swiss-Prot
Match: DDX3Y_PONAB (ATP-dependent RNA helicase DDX3Y OS=Pongo abelii GN=DDX3Y PE=2 SV=1) HSP 1 Score: 130.183 bits (326), Expect = 1.145e-29 Identity = 75/191 (39.27%), Postives = 113/191 (59.16%), Query Frame = 3 Query: 75 PFCLIVCPSRELARQTYEVVEQFLTPMRDAGYPDLRTLLCIGGVDMRSQLEVVKRGVHIVVATPGRLKDMLAKKKMNLDNCRYLTLDEADRLVDLGFEDDIREVFDHF----KAQRQTLLFSATMPTKIQNFARSALVKPVTVNVGRAGAANLDVIQEVEYVKQEAKIVYLLECLQKT--PPPVLIFCENR 629 P L++ P+RELA Q YE +F R +R + GG D+ Q+ ++RG H++VATPGRL DM+ + K+ LD C+YL LDEADR++D+GFE IR + + K R T++FSAT P +IQ AR L + + + VGR G+ + ++ Q+V +V+ K +LL+ L T L+F E + Sbjct: 265 PISLVLAPTRELAVQIYEEARKFSYRSR------VRPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKYLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLAVGRVGSTSENITQKVVWVEDLDKRSFLLDLLGATGRDSLTLVFVETK 449 The following BLAST results are available for this feature:
BLAST of FC920897 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920897 ID=FC920897; Name=FC920897; organism=Citrus clementina; type=EST; length=734bpback to top |