FC920897
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC920897 vs. ExPASy Swiss-Prot
Match: DED1_CANAL (ATP-dependent RNA helicase DED1 OS=Candida albicans GN=DED1 PE=3 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 1.124e-28 Identity = 74/193 (38.34%), Postives = 112/193 (58.03%), Query Frame = 3 Query: 75 PFCLIVCPSRELARQTYEVVEQFLTPMRDAGYPD-LRTLLCIGGVDMRSQLEVVKRGVHIVVATPGRLKDMLAKKKMNLDNCRYLTLDEADRLVDLGFEDDIREVFDHFK----AQRQTLLFSATMPTKIQNFARSALVKPVTVNVGRAGAANLDVIQEVEYVKQEAKIVYLLECLQKTPPPV-LIFCENRLM 635 P L++ P+REL Q YE ++F Y +R + GG D+ Q+ + RG ++VATPGRLKD+L + K++L N RYL LDEADR++D+GFE IR + + RQTL+FSAT P IQ AR L V ++VGR G+ + ++ Q++ YV+ + K +L+ L + ++F E + M Sbjct: 270 PTILVMAPTRELVSQIYEESKKF-------SYRSWVRACVVYGGADIGQQMRNMDRGCDLLVATPGRLKDLLDRGKVSLANIRYLVLDEADRMLDMGFEPQIRYIVEECDMPAVKDRQTLMFSATFPRDIQMLARDFLKDYVFLSVGRVGSTSENITQKILYVEDDEKKSVILDLLSANENGLTIVFTETKRM 455 HSP 2 Score: 23.8682 bits (50), Expect = 1.124e-28 Identity = 9/19 (47.37%), Postives = 14/19 (73.68%), Query Frame = 1 Query: 676 AVAVHGGKDQEEREYAISS 732 A A+HG + Q ERE A+++ Sbjct: 470 ATAIHGDRSQYEREKALAA 488
BLAST of FC920897 vs. ExPASy Swiss-Prot
Match: DED1_VANPO (ATP-dependent RNA helicase DED1 OS=Vanderwaltozyma polyspora (strain ATCC 22028 / DSM 70294) GN=DED1 PE=3 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 1.266e-28 Identity = 78/219 (35.62%), Postives = 124/219 (56.62%), Query Frame = 3 Query: 75 PFCLIVCPSRELARQTYEVVEQFLTPMRDAGYPDLRTLLCIGGVDMRSQLEVVKRGVHIVVATPGRLKDMLAKKKMNLDNCRYLTLDEADRLVDLGFEDDIREVFDHFK----AQRQTLLFSATMPTKIQNFARSALVKPVTVNVGRAGAANLDVIQEVEYVKQEAKIVYLLECLQKTPPPV-LIFCENRLMLTTFTNIYS*KD*GSGRTWRERSGRER 716 P L++ P+RELA Q Y+ ++F +R + GG D+ SQ+ + RG ++VATPGRL D+L + +++L N +YL LDEADR++D+GFE IR++ D +RQTL+FSAT P IQ+ AR L + ++VG+ G+ + ++ Q + YV+ K LL+ L + + LIF E + M T+ +D + +R+ ER Sbjct: 244 PTALVLAPTRELATQIYDEAKKFTYRSW------VRPTVVYGGSDIGSQIRDLSRGCDLLVATPGRLSDLLERGRVSLANVKYLVLDEADRMLDMGFEPQIRQIVDGCDMPPVGERQTLMFSATFPDDIQHLARDFLSDYIFLSVGKVGSTSENITQRILYVEDMDKKSTLLDLLSASNDGLTLIFVETKRMADELTDFLIMQDFRATAIHGDRTQSER 456
BLAST of FC920897 vs. ExPASy Swiss-Prot
Match: DED1_LODEL (ATP-dependent RNA helicase DED1 OS=Lodderomyces elongisporus GN=DED1 PE=3 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 1.463e-28 Identity = 72/192 (37.50%), Postives = 112/192 (58.33%), Query Frame = 3 Query: 75 PFCLIVCPSRELARQTYEVVEQFLTPMRDAGYPDLRTLLCIGGVDMRSQLEVVKRGVHIVVATPGRLKDMLAKKKMNLDNCRYLTLDEADRLVDLGFEDDIREVFDHFK----AQRQTLLFSATMPTKIQNFARSALVKPVTVNVGRAGAANLDVIQEVEYVKQEAKIVYLLECLQKTPPPV-LIFCENRLM 635 P L++ P+REL Q Y+ ++F A +R + GG D+ +Q+ + RG ++VATPGRLKD+L + +++L N +YL LDEADR++D+GFE IR + RQTL+FSAT P IQ AR L + ++VGR G+ + ++ Q+V YV+ E K +L+ L + ++F E + M Sbjct: 259 PTILVMAPTRELVSQIYDESKKF------AYRSWVRPCVVYGGADIGNQIRQLDRGCDLLVATPGRLKDLLERGRVSLANIKYLVLDEADRMLDMGFEPQIRHIVQECDMPDVQDRQTLMFSATFPRDIQMLARDFLKDYIFLSVGRVGSTSENITQKVLYVEDEEKKSVILDLLNANSEGLTIVFTETKRM 444 HSP 2 Score: 23.8682 bits (50), Expect = 1.463e-28 Identity = 9/19 (47.37%), Postives = 14/19 (73.68%), Query Frame = 1 Query: 676 AVAVHGGKDQEEREYAISS 732 A A+HG + Q ERE A+++ Sbjct: 459 ATAIHGDRSQYEREKALAA 477
BLAST of FC920897 vs. ExPASy Swiss-Prot
Match: DED1_PICST (ATP-dependent RNA helicase DED1 OS=Pichia stipitis GN=DED1 PE=3 SV=3) HSP 1 Score: 123.635 bits (309), Expect = 1.464e-28 Identity = 72/192 (37.50%), Postives = 112/192 (58.33%), Query Frame = 3 Query: 75 PFCLIVCPSRELARQTYEVVEQFLTPMRDAGYPDLRTLLCIGGVDMRSQLEVVKRGVHIVVATPGRLKDMLAKKKMNLDNCRYLTLDEADRLVDLGFEDDIREVFDHFK----AQRQTLLFSATMPTKIQNFARSALVKPVTVNVGRAGAANLDVIQEVEYVKQEAKIVYLLECLQKTPPPV-LIFCENRLM 635 P L++ P+REL Q Y+ ++F A ++ + GG D+ Q+ + +G ++VATPGRLKD+L + +++L N +YL LDEADR++D+GFE IR + RQTL+FSAT PT IQ AR L + ++VGR G+ + ++ Q++ YV+ E K LL+ L + +IF E + M Sbjct: 252 PTILVMAPTRELVSQIYDEAKKF------AYRSWVKPAVVYGGADIGQQIRNLDKGCDLLVATPGRLKDLLERGRVSLANIKYLVLDEADRMLDMGFEPQIRHIVQECDMPDVQDRQTLMFSATFPTDIQMLARDFLKDYIFLSVGRVGSTSENITQKILYVEDEEKKSVLLDLLSAGDAGLTIIFTETKRM 437 HSP 2 Score: 23.8682 bits (50), Expect = 1.464e-28 Identity = 9/19 (47.37%), Postives = 14/19 (73.68%), Query Frame = 1 Query: 676 AVAVHGGKDQEEREYAISS 732 A A+HG + Q ERE A+++ Sbjct: 452 ATAIHGDRSQYEREKALAA 470
BLAST of FC920897 vs. ExPASy Swiss-Prot
Match: DED1_PICGU (ATP-dependent RNA helicase DED1 OS=Pichia guilliermondii GN=DED1 PE=3 SV=3) HSP 1 Score: 123.635 bits (309), Expect = 1.464e-28 Identity = 73/193 (37.82%), Postives = 112/193 (58.03%), Query Frame = 3 Query: 75 PFCLIVCPSRELARQTYEVVEQFLTPMRDAGYPD-LRTLLCIGGVDMRSQLEVVKRGVHIVVATPGRLKDMLAKKKMNLDNCRYLTLDEADRLVDLGFEDDIREVFDHFK----AQRQTLLFSATMPTKIQNFARSALVKPVTVNVGRAGAANLDVIQEVEYVKQEAKIVYLLECLQKTPPPV-LIFCENRLM 635 P L++ P+REL Q +E ++F Y +R + GG D+ +Q+ + RG ++VATPGRLKD+L + +++L N +YL LDEADR++D+GFE IR + RQTL+FSAT P IQ AR L + ++VGR G+ + ++ Q+V YV+ + K LL+ L + +IF E + M Sbjct: 253 PTALVMAPTRELVSQIFEEAKKF-------SYRSWVRPCVVYGGADIGTQIRNLDRGCDLLVATPGRLKDLLERGRVSLSNIKYLVLDEADRMLDMGFEPQIRHIVQECDMPGVESRQTLMFSATFPRDIQMLARDFLKDYIFLSVGRVGSTSENITQKVLYVEDDEKKSVLLDLLSANDNGLTIIFTETKRM 438 HSP 2 Score: 23.8682 bits (50), Expect = 1.464e-28 Identity = 9/19 (47.37%), Postives = 14/19 (73.68%), Query Frame = 1 Query: 676 AVAVHGGKDQEEREYAISS 732 A A+HG + Q ERE A+++ Sbjct: 453 ATAIHGDRSQYEREKALAA 471
BLAST of FC920897 vs. ExPASy Swiss-Prot
Match: DDX5_MACFA (Probable ATP-dependent RNA helicase DDX5 OS=Macaca fascicularis GN=DDX5 PE=2 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 1.907e-28 Identity = 69/193 (35.75%), Postives = 113/193 (58.55%), Query Frame = 3 Query: 66 GEGPFCLIVCPSRELARQTYEVVEQFLTPMRDAGYPDLRTLLCIGGVDMRSQLEVVKRGVHIVVATPGRLKDMLAKKKMNLDNCRYLTLDEADRLVDLGFEDDIREVFDHFKAQRQTLLFSATMPTKIQNFARSALVKPVTVNVGRAG-AANLDVIQEVEY---VKQEAKIVYLL-ECLQKTPPPVLIFCENR 629 G+GP CL++ P+RELA+Q +V ++ R L++ GG Q+ ++RGV I +ATPGRL D L K NL YL LDEADR++D+GFE IR++ D + RQTL++SAT P +++ A L + +N+G +AN +++Q V+ V+++ K++ L+ E + + ++F E + Sbjct: 165 GDGPICLVLAPTRELAQQVQQVAAEYCRACR------LKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLECGKTNLRRTTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLKDYIHINIGALELSANHNILQIVDVCHDVEKDEKLIRLMEEIMSEKENKTIVFVETK 351 HSP 2 Score: 22.3274 bits (46), Expect = 1.907e-28 Identity = 7/18 (38.89%), Postives = 13/18 (72.22%), Query Frame = 1 Query: 676 AVAVHGGKDQEEREYAIS 729 A+ +HG K Q+ER + ++ Sbjct: 368 AMGIHGDKSQQERGWVLN 385
BLAST of FC920897 vs. ExPASy Swiss-Prot
Match: DBP2_PICGU (ATP-dependent RNA helicase DBP2 OS=Pichia guilliermondii GN=DBP2 PE=3 SV=3) HSP 1 Score: 122.865 bits (307), Expect = 1.910e-28 Identity = 71/194 (36.60%), Postives = 101/194 (52.06%), Query Frame = 3 Query: 63 PGEGPFCLIVCPSRELARQTYEVVEQFLTPMRDAGYPDLRTLLCIGGVDMRSQLEVVKRGVHIVVATPGRLKDMLAKKKMNLDNCRYLTLDEADRLVDLGFEDDIREVFDHFKAQRQTLLFSATMPTKIQNFARSALVKPVTVNVGRAGAANLDVIQEV-----EYVKQEAKIVYLLECLQKTPPPVLIFCENR 629 PG+GP L++ P+RELA Q + +F R +R GG Q+ + RGV I +ATPGRL DML K NL YL LDEADR++D+GFE IR++ D + RQTL++SAT P ++Q R L P+ V +G A I ++ E+ K++ + +L VLIF + Sbjct: 195 PGDGPIVLVLAPTRELAVQIQQECSKFGASSR------IRNTCIYGGAPKGQQIRDLARGVEICIATPGRLIDMLETGKTNLRRVTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVQTLTRDYLNDPIQVTIGSLELAASHTITQIVEVLSEFEKRDRLVKHLETATADKEAKVLIFSSTK 382 HSP 2 Score: 24.2534 bits (51), Expect = 1.910e-28 Identity = 8/17 (47.06%), Postives = 13/17 (76.47%), Query Frame = 1 Query: 676 AVAVHGGKDQEEREYAI 726 A+A+HG K Q ER++ + Sbjct: 399 ALAIHGDKQQNERDWVL 415
BLAST of FC920897 vs. ExPASy Swiss-Prot
Match: DBP2_CRYNE (ATP-dependent RNA helicase DBP2-A OS=Cryptococcus neoformans GN=DBP2 PE=3 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 1.911e-28 Identity = 78/200 (39.00%), Postives = 106/200 (53.00%), Query Frame = 3 Query: 63 PGEGPFCLIVCPSRELARQTYEVVEQFLTPMRDAGYPDLRTLLCIGGVDMRSQLEVVKRGVHIVVATPGRLKDMLAKKKMNLDNCRYLTLDEADRLVDLGFEDDIREVFDHFKAQRQTLLFSATMPTKIQNFARSALVKPVTVNVGRAG-AANLDVIQEVEY---VKQEAKIVYLLECLQKTPPPVLIFCENRLMLTTFT 650 PG+GP LI+ P+RELA Q +F R +R GG Q+ ++RGV I VATPGRL DML K NL YL +DEADR++D+GFE IR++ + RQTLLFSAT P ++Q A L + VN+G AN +V Q VE + +K++ LE + + VLIF + + T Sbjct: 180 PGDGPIVLILAPTRELAVQIQTEATKFGQSSR------IRNTAIYGGAPKGPQIRDLQRGVEICVATPGRLIDMLETGKTNLKRVTYLVMDEADRMLDMGFEPQIRKIVSQIRPDRQTLLFSATWPKEVQRLAMDFLHDFIQVNIGSLDLTANHNVAQHVEVCTDFDKRSKLLSHLEKISQENGKVLIFVATKRVADDLT 373 HSP 2 Score: 24.2534 bits (51), Expect = 1.911e-28 Identity = 8/18 (44.44%), Postives = 14/18 (77.78%), Query Frame = 1 Query: 676 AVAVHGGKDQEEREYAIS 729 A+A+HG K Q ER++ ++ Sbjct: 383 ALAIHGDKQQAERDWVLA 400
BLAST of FC920897 vs. ExPASy Swiss-Prot
Match: DED1_YARLI (ATP-dependent RNA helicase DED1 OS=Yarrowia lipolytica GN=DED1 PE=3 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 2.159e-28 Identity = 77/219 (35.16%), Postives = 123/219 (56.16%), Query Frame = 3 Query: 75 PFCLIVCPSRELARQTYEVVEQFLTPMRDAGYPDLRTLLCIGGVDMRSQLEVVKRGVHIVVATPGRLKDMLAKKKMNLDNCRYLTLDEADRLVDLGFEDDIREVFDHFKA----QRQTLLFSATMPTKIQNFARSALVKPVTVNVGRAGAANLDVIQEVEYVKQEAKIVYLLECLQKTPPPV-LIFCENRLMLTTFTNIYS*KD*GSGRTWRERSGRER 716 P L++ P+REL Q Y+ ++F A +R + GG D+ Q+ ++RG ++VA PGRL D++ + K++L+N +YL LDEADR++D+GFE IR + +RQTL+FSAT P IQ AR L + ++VGR G+ + ++ Q+VEYV+ KI LL+ L + L+F E + ++ +D + +RS R+R Sbjct: 245 PTALVLAPTRELVSQIYDEAKKF------AYRSWVRPCVVYGGADIGEQMRNIERGCDLLVAAPGRLVDLIDRGKVSLENIKYLVLDEADRMLDMGFEPQIRAIVQGSGMPDVNERQTLMFSATFPRNIQMLARDFLKDYIFLSVGRVGSTSENITQKVEYVEDGDKISALLDILSAAGKGLTLVFVETKRGADYLCDVLQSEDFPATSIHGDRSQRDR 457
BLAST of FC920897 vs. ExPASy Swiss-Prot
Match: DED1_SCHPO (ATP-dependent RNA helicase ded1 OS=Schizosaccharomyces pombe GN=ded1 PE=1 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 2.159e-28 Identity = 79/220 (35.91%), Postives = 122/220 (55.45%), Query Frame = 3 Query: 75 PFCLIVCPSRELARQTYEVVEQFLTPMRDAGYPDLRTLLCIGGVDMRSQLEVVKRGVHIVVATPGRLKDMLAKKKMNLDNCRYLTLDEADRLVDLGFEDDIREVFDHFK----AQRQTLLFSATMPTKIQNFARSALVKPVTVNVGRAGAANLDVIQEVEYVKQEAKIVYLLECLQKTPPP--VLIFCENRLMLTTFTNIYS*KD*GSGRTWRERSGRER 716 P LI+ P+REL Q +E +F +R GG D+R+Q+ + +G ++ ATPGRL D++ + +++L N ++L LDEADR++D+GFE IR + + +RQTL+FSAT P IQ AR L V ++VGR G+ + ++ Q+V +V+ K YLL+ L PP LIF E + M T T+ + + +R+ RER Sbjct: 256 PTTLILAPTRELVCQIHEESRKFCYRSW------VRPCAVYGGADIRAQIRQIDQGCDLLSATPGRLVDLIDRGRISLANIKFLVLDEADRMLDMGFEPQIRHIVEGADMTSVEERQTLMFSATFPRDIQLLARDFLKDYVFLSVGRVGSTSENITQKVVHVEDSEKRSYLLDILHTLPPEGLTLIFVETKRMADTLTDYLLNSNFPATSIHGDRTQRER 469 The following BLAST results are available for this feature:
BLAST of FC920897 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920897 ID=FC920897; Name=FC920897; organism=Citrus clementina; type=EST; length=734bpback to top |