FC921104
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC921104 vs. ExPASy Swiss-Prot
Match: RL30_MOUSE (60S ribosomal protein L30 OS=Mus musculus GN=Rpl30 PE=2 SV=2) HSP 1 Score: 158.688 bits (400), Expect = 1.990e-38 Identity = 73/98 (74.49%), Postives = 85/98 (86.73%), Query Frame = 3 Query: 120 ESINNRLALVMKSGKYTLGYKTVLRSLRTSKGKLIILSNNCPPLRKSEIEYYAMLAKVGVHHYNGNNVDLGTACGKYFRVSCLSIIDPGDSDITKSLP 413 ESIN+RL LVMKSGKY LGYK L+ +R K KL+IL+NNCP LRKSEIEYYAMLAK GVHHY+GNN++LGTACGKY+RV L+IIDPGDSDI +S+P Sbjct: 12 ESINSRLQLVMKSGKYVLGYKQTLKMIRQGKAKLVILANNCPALRKSEIEYYAMLAKTGVHHYSGNNIELGTACGKYYRVCTLAIIDPGDSDIIRSMP 109
BLAST of FC921104 vs. ExPASy Swiss-Prot
Match: RL30_MACFA (60S ribosomal protein L30 OS=Macaca fascicularis GN=RPL30 PE=3 SV=3) HSP 1 Score: 158.688 bits (400), Expect = 1.990e-38 Identity = 73/98 (74.49%), Postives = 85/98 (86.73%), Query Frame = 3 Query: 120 ESINNRLALVMKSGKYTLGYKTVLRSLRTSKGKLIILSNNCPPLRKSEIEYYAMLAKVGVHHYNGNNVDLGTACGKYFRVSCLSIIDPGDSDITKSLP 413 ESIN+RL LVMKSGKY LGYK L+ +R K KL+IL+NNCP LRKSEIEYYAMLAK GVHHY+GNN++LGTACGKY+RV L+IIDPGDSDI +S+P Sbjct: 12 ESINSRLQLVMKSGKYVLGYKQTLKMIRQGKAKLVILANNCPALRKSEIEYYAMLAKTGVHHYSGNNIELGTACGKYYRVCTLAIIDPGDSDIIRSMP 109
BLAST of FC921104 vs. ExPASy Swiss-Prot
Match: RL30_HUMAN (60S ribosomal protein L30 OS=Homo sapiens GN=RPL30 PE=1 SV=2) HSP 1 Score: 158.688 bits (400), Expect = 1.990e-38 Identity = 73/98 (74.49%), Postives = 85/98 (86.73%), Query Frame = 3 Query: 120 ESINNRLALVMKSGKYTLGYKTVLRSLRTSKGKLIILSNNCPPLRKSEIEYYAMLAKVGVHHYNGNNVDLGTACGKYFRVSCLSIIDPGDSDITKSLP 413 ESIN+RL LVMKSGKY LGYK L+ +R K KL+IL+NNCP LRKSEIEYYAMLAK GVHHY+GNN++LGTACGKY+RV L+IIDPGDSDI +S+P Sbjct: 12 ESINSRLQLVMKSGKYVLGYKQTLKMIRQGKAKLVILANNCPALRKSEIEYYAMLAKTGVHHYSGNNIELGTACGKYYRVCTLAIIDPGDSDIIRSMP 109
BLAST of FC921104 vs. ExPASy Swiss-Prot
Match: RL30_CHICK (60S ribosomal protein L30 OS=Gallus gallus GN=RPL30 PE=3 SV=2) HSP 1 Score: 158.688 bits (400), Expect = 1.990e-38 Identity = 73/98 (74.49%), Postives = 85/98 (86.73%), Query Frame = 3 Query: 120 ESINNRLALVMKSGKYTLGYKTVLRSLRTSKGKLIILSNNCPPLRKSEIEYYAMLAKVGVHHYNGNNVDLGTACGKYFRVSCLSIIDPGDSDITKSLP 413 ESIN+RL LVMKSGKY LGYK L+ +R K KL+IL+NNCP LRKSEIEYYAMLAK GVHHY+GNN++LGTACGKY+RV L+IIDPGDSDI +S+P Sbjct: 12 ESINSRLQLVMKSGKYVLGYKQTLKMIRQGKAKLVILANNCPALRKSEIEYYAMLAKTGVHHYSGNNIELGTACGKYYRVCTLAIIDPGDSDIIRSMP 109
BLAST of FC921104 vs. ExPASy Swiss-Prot
Match: RL30_BOVIN (60S ribosomal protein L30 OS=Bos taurus GN=RPL30 PE=3 SV=3) HSP 1 Score: 158.688 bits (400), Expect = 1.990e-38 Identity = 73/98 (74.49%), Postives = 85/98 (86.73%), Query Frame = 3 Query: 120 ESINNRLALVMKSGKYTLGYKTVLRSLRTSKGKLIILSNNCPPLRKSEIEYYAMLAKVGVHHYNGNNVDLGTACGKYFRVSCLSIIDPGDSDITKSLP 413 ESIN+RL LVMKSGKY LGYK L+ +R K KL+IL+NNCP LRKSEIEYYAMLAK GVHHY+GNN++LGTACGKY+RV L+IIDPGDSDI +S+P Sbjct: 12 ESINSRLQLVMKSGKYVLGYKQTLKMIRQGKAKLVILANNCPALRKSEIEYYAMLAKTGVHHYSGNNIELGTACGKYYRVCTLAIIDPGDSDIIRSMP 109
BLAST of FC921104 vs. ExPASy Swiss-Prot
Match: RL30_ICTPU (60S ribosomal protein L30 OS=Ictalurus punctatus GN=rpl30 PE=3 SV=2) HSP 1 Score: 154.451 bits (389), Expect = 3.753e-37 Identity = 71/98 (72.45%), Postives = 84/98 (85.71%), Query Frame = 3 Query: 120 ESINNRLALVMKSGKYTLGYKTVLRSLRTSKGKLIILSNNCPPLRKSEIEYYAMLAKVGVHHYNGNNVDLGTACGKYFRVSCLSIIDPGDSDITKSLP 413 ESIN+RL LVMKSGKY LGYK + +R K KL+IL+NNCP LRKSEIEYYAML+K GVHHY+GNN++LGTACGKY+RV L+IIDPGDSDI +S+P Sbjct: 12 ESINSRLQLVMKSGKYVLGYKQSQKMIRQGKAKLVILANNCPALRKSEIEYYAMLSKTGVHHYSGNNIELGTACGKYYRVCTLAIIDPGDSDIIRSMP 109
BLAST of FC921104 vs. ExPASy Swiss-Prot
Match: RL30_SPOFR (60S ribosomal protein L30 OS=Spodoptera frugiperda GN=RpL30 PE=3 SV=1) HSP 1 Score: 153.68 bits (387), Expect = 6.401e-37 Identity = 71/98 (72.45%), Postives = 84/98 (85.71%), Query Frame = 3 Query: 120 ESINNRLALVMKSGKYTLGYKTVLRSLRTSKGKLIILSNNCPPLRKSEIEYYAMLAKVGVHHYNGNNVDLGTACGKYFRVSCLSIIDPGDSDITKSLP 413 ESIN+RLALVMKSGKY LGYK L++LR K KL+I++ N PPLRKSEIEYYA+LAK GVHHY+GNN++LGTACGKY+RV L+I DPGDSDI +LP Sbjct: 12 ESINSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPLRKSEIEYYALLAKTGVHHYSGNNIELGTACGKYYRVCTLAITDPGDSDIITTLP 109
BLAST of FC921104 vs. ExPASy Swiss-Prot
Match: RL30_BRABE (60S ribosomal protein L30 OS=Branchiostoma belcheri GN=RPL30 PE=3 SV=1) HSP 1 Score: 151.754 bits (382), Expect = 2.432e-36 Identity = 72/100 (72.00%), Postives = 83/100 (83.00%), Query Frame = 3 Query: 120 ESINNRLALVMKSGKYTLGYKTVLRSLRTSKGKLIILSNNCPPLRKSEIEYYAMLAKVGVHHYNGNNVDLGTACGKYFRVSCLSIIDPGDSDITKSLPGD 419 ESIN+RL LVMKSGKY LG K L+ LR K KLII++NN P LRKSEIEYYAMLAK GVHHY+GNN++LGTACGKYFRV L+I DPGDSDI +S+P + Sbjct: 9 ESINSRLQLVMKSGKYVLGLKETLKVLRQGKAKLIIIANNTPALRKSEIEYYAMLAKTGVHHYSGNNIELGTACGKYFRVCTLAITDPGDSDIIRSMPAE 108
BLAST of FC921104 vs. ExPASy Swiss-Prot
Match: RL30B_SCHPO (60S ribosomal protein L30-2 OS=Schizosaccharomyces pombe GN=rpl30b PE=2 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 1.249e-32 Identity = 62/93 (66.67%), Postives = 80/93 (86.02%), Query Frame = 3 Query: 120 ESINNRLALVMKSGKYTLGYKTVLRSLRTSKGKLIILSNNCPPLRKSEIEYYAMLAKVGVHHYNGNNVDLGTACGKYFRVSCLSIIDPGDSDI 398 ++IN++LAL MKSGKY LGYK+ L++LR+ K KLI+++ N PPLRKSE+EYYAML++ VHHY+GNN+DLGTACGK FRV L++ID GDSDI Sbjct: 22 DTINSKLALTMKSGKYVLGYKSTLKTLRSGKAKLILIAANAPPLRKSELEYYAMLSRCSVHHYSGNNIDLGTACGKLFRVGVLAVIDAGDSDI 114
BLAST of FC921104 vs. ExPASy Swiss-Prot
Match: RL30A_SCHPO (60S ribosomal protein L30-1 OS=Schizosaccharomyces pombe GN=rpl30a PE=2 SV=2) HSP 1 Score: 139.043 bits (349), Expect = 1.632e-32 Identity = 63/93 (67.74%), Postives = 77/93 (82.80%), Query Frame = 3 Query: 120 ESINNRLALVMKSGKYTLGYKTVLRSLRTSKGKLIILSNNCPPLRKSEIEYYAMLAKVGVHHYNGNNVDLGTACGKYFRVSCLSIIDPGDSDI 398 ++IN +LAL MKSGKY LGYK+ L++LR+ K KLI+++ NCPPLRKSE+EYYAML+K VHHY G N+DLGTACGK FRV L+I D GDSDI Sbjct: 14 DTINAKLALTMKSGKYVLGYKSTLKTLRSGKAKLILIAGNCPPLRKSELEYYAMLSKANVHHYAGTNIDLGTACGKLFRVGVLAITDAGDSDI 106 The following BLAST results are available for this feature:
BLAST of FC921104 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 50
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC921104 ID=FC921104; Name=FC921104; organism=Citrus clementina; type=EST; length=592bpback to top |