FC921104
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC921104 vs. ExPASy Swiss-Prot
Match: RL30_LUPLU (60S ribosomal protein L30 OS=Lupinus luteus GN=RPL30 PE=3 SV=1) HSP 1 Score: 196.823 bits (499), Expect = 6.593e-50 Identity = 92/101 (91.09%), Postives = 99/101 (98.02%), Query Frame = 3 Query: 117 HESINNRLALVMKSGKYTLGYKTVLRSLRTSKGKLIILSNNCPPLRKSEIEYYAMLAKVGVHHYNGNNVDLGTACGKYFRVSCLSIIDPGDSDITKSLPGD 419 HESINNRLALVMKSGKYTLGYKTVL+SLR+SKGKLII++NNCPPLRKSEIEYYAMLAKVGVHHYNGNNVDLGTACGKY+RV CLSI+DPGDSDI K+LPGD Sbjct: 11 HESINNRLALVMKSGKYTLGYKTVLKSLRSSKGKLIIIANNCPPLRKSEIEYYAMLAKVGVHHYNGNNVDLGTACGKYYRVCCLSIVDPGDSDIIKTLPGD 111
BLAST of FC921104 vs. ExPASy Swiss-Prot
Match: RL30_EUPES (60S ribosomal protein L30 OS=Euphorbia esula GN=RPL30 PE=3 SV=1) HSP 1 Score: 193.356 bits (490), Expect = 7.290e-49 Identity = 91/102 (89.22%), Postives = 98/102 (96.08%), Query Frame = 3 Query: 117 HESINNRLALVMKSGKYTLGYKTVLRSLRTSKGKLIILSNNCPPLRKSEIEYYAMLAKVGVHHYNGNNVDLGTACGKYFRVSCLSIIDPGDSDITKSLPGDH 422 HESIN+RLALVMKSGK+TLGYKTVL SLR++KGKLII++NNCPPLRKSEIEYYAMLAKVGVHHYNGNNVDLGTACGKYFRV CLSIID GDSDI KS+PGDH Sbjct: 11 HESINSRLALVMKSGKFTLGYKTVLESLRSNKGKLIIIANNCPPLRKSEIEYYAMLAKVGVHHYNGNNVDLGTACGKYFRVCCLSIIDAGDSDIIKSIPGDH 112
BLAST of FC921104 vs. ExPASy Swiss-Prot
Match: RL302_ARATH (60S ribosomal protein L30-2 OS=Arabidopsis thaliana GN=RPL30B PE=2 SV=1) HSP 1 Score: 191.045 bits (484), Expect = 3.618e-48 Identity = 89/101 (88.12%), Postives = 97/101 (96.04%), Query Frame = 3 Query: 117 HESINNRLALVMKSGKYTLGYKTVLRSLRTSKGKLIILSNNCPPLRKSEIEYYAMLAKVGVHHYNGNNVDLGTACGKYFRVSCLSIIDPGDSDITKSLPGD 419 HE IN+RLALVMKSGKYTLGYK+VL+SLR SKGKLI++S NCPPLR+SEIEYYAMLAKVGVHHYNGNNVDLGTACGKYFRVSCLSI+DPGDSDI KS+PGD Sbjct: 11 HEGINSRLALVMKSGKYTLGYKSVLKSLRGSKGKLILISTNCPPLRRSEIEYYAMLAKVGVHHYNGNNVDLGTACGKYFRVSCLSIVDPGDSDIIKSIPGD 111
BLAST of FC921104 vs. ExPASy Swiss-Prot
Match: RL301_ARATH (Putative 60S ribosomal protein L30-1 OS=Arabidopsis thaliana GN=RPL30A PE=3 SV=1) HSP 1 Score: 190.274 bits (482), Expect = 6.171e-48 Identity = 89/101 (88.12%), Postives = 98/101 (97.03%), Query Frame = 3 Query: 117 HESINNRLALVMKSGKYTLGYKTVLRSLRTSKGKLIILSNNCPPLRKSEIEYYAMLAKVGVHHYNGNNVDLGTACGKYFRVSCLSIIDPGDSDITKSLPGD 419 HE IN+RLALVMKSGKYTLGYK+VL+SLR+SKGKLI++S+NCPPLR+SEIEYYAMLAKVGVHHYN NNVDLGTACGKYFRVSCLSI+DPGDSDI KSLPGD Sbjct: 11 HEGINSRLALVMKSGKYTLGYKSVLKSLRSSKGKLILISSNCPPLRRSEIEYYAMLAKVGVHHYNRNNVDLGTACGKYFRVSCLSIVDPGDSDIIKSLPGD 111
BLAST of FC921104 vs. ExPASy Swiss-Prot
Match: RL303_ARATH (60S ribosomal protein L30-3 OS=Arabidopsis thaliana GN=RPL30C PE=2 SV=1) HSP 1 Score: 189.119 bits (479), Expect = 1.375e-47 Identity = 88/101 (87.13%), Postives = 98/101 (97.03%), Query Frame = 3 Query: 117 HESINNRLALVMKSGKYTLGYKTVLRSLRTSKGKLIILSNNCPPLRKSEIEYYAMLAKVGVHHYNGNNVDLGTACGKYFRVSCLSIIDPGDSDITKSLPGD 419 HE IN+RLALVMKSGKYTLGYK+VL+SLR+SKGKLI++S+NCPPLR+SEIEYYAMLAKVGVH YNGNNVDLGTACGKYFRVSCLSI+DPGDSDI K+LPGD Sbjct: 11 HEGINSRLALVMKSGKYTLGYKSVLKSLRSSKGKLILISSNCPPLRRSEIEYYAMLAKVGVHRYNGNNVDLGTACGKYFRVSCLSIVDPGDSDIIKTLPGD 111
BLAST of FC921104 vs. ExPASy Swiss-Prot
Match: RL30_MAIZE (60S ribosomal protein L30 OS=Zea mays GN=RPL30 PE=3 SV=1) HSP 1 Score: 176.792 bits (447), Expect = 7.061e-44 Identity = 82/100 (82.00%), Postives = 93/100 (93.00%), Query Frame = 3 Query: 120 ESINNRLALVMKSGKYTLGYKTVLRSLRTSKGKLIILSNNCPPLRKSEIEYYAMLAKVGVHHYNGNNVDLGTACGKYFRVSCLSIIDPGDSDITKSLPGD 419 ++INN+L LVMKSGKYTLGYKTVLR+LR SK KL+I++NNCPPLRKSEIEYYAMLAKV VHH++GNNVDLGTACGKYFRV CLSIIDPGDSDI K+ PG+ Sbjct: 12 DNINNKLQLVMKSGKYTLGYKTVLRTLRNSKSKLVIIANNCPPLRKSEIEYYAMLAKVTVHHFHGNNVDLGTACGKYFRVCCLSIIDPGDSDIIKTTPGE 111
BLAST of FC921104 vs. ExPASy Swiss-Prot
Match: RL30_ORYSJ (60S ribosomal protein L30 OS=Oryza sativa subsp. japonica GN=RPL30 PE=3 SV=1) HSP 1 Score: 172.555 bits (436), Expect = 1.332e-42 Identity = 81/96 (84.38%), Postives = 90/96 (93.75%), Query Frame = 3 Query: 120 ESINNRLALVMKSGKYTLGYKTVLRSLRTSKGKLIILSNNCPPLRKSEIEYYAMLAKVGVHHYNGNNVDLGTACGKYFRVSCLSIIDPGDSDITKS 407 ++INN+L LVMKSGKYTLGYKTVLR+LR SK KL+I+SNNCPPLRKSEIEYYAMLAKV VHH++GNNVDLGTACGKYFRV CLSIIDPGDSDI K+ Sbjct: 12 DNINNKLQLVMKSGKYTLGYKTVLRTLRNSKAKLVIISNNCPPLRKSEIEYYAMLAKVTVHHFHGNNVDLGTACGKYFRVCCLSIIDPGDSDIIKT 107
BLAST of FC921104 vs. ExPASy Swiss-Prot
Match: RL30_WHEAT (60S ribosomal protein L30 OS=Triticum aestivum PE=1 SV=2) HSP 1 Score: 165.622 bits (418), Expect = 1.628e-40 Identity = 77/93 (82.80%), Postives = 88/93 (94.62%), Query Frame = 3 Query: 120 ESINNRLALVMKSGKYTLGYKTVLRSLRTSKGKLIILSNNCPPLRKSEIEYYAMLAKVGVHHYNGNNVDLGTACGKYFRVSCLSIIDPGDSDI 398 E+INN+L LVMKSGKYTLGYKTVL++LR+S GKLIIL+NNCPPLRKSEIE YAMLAK+ VHH++GNNVDLGTACGKY+RV CLSI+DPGDSDI Sbjct: 12 ENINNKLQLVMKSGKYTLGYKTVLKTLRSSLGKLIILANNCPPLRKSEIETYAMLAKISVHHFHGNNVDLGTACGKYYRVCCLSILDPGDSDI 104
BLAST of FC921104 vs. ExPASy Swiss-Prot
Match: RL30_RAT (60S ribosomal protein L30 OS=Rattus norvegicus GN=Rpl30 PE=3 SV=2) HSP 1 Score: 158.688 bits (400), Expect = 1.990e-38 Identity = 73/98 (74.49%), Postives = 85/98 (86.73%), Query Frame = 3 Query: 120 ESINNRLALVMKSGKYTLGYKTVLRSLRTSKGKLIILSNNCPPLRKSEIEYYAMLAKVGVHHYNGNNVDLGTACGKYFRVSCLSIIDPGDSDITKSLP 413 ESIN+RL LVMKSGKY LGYK L+ +R K KL+IL+NNCP LRKSEIEYYAMLAK GVHHY+GNN++LGTACGKY+RV L+IIDPGDSDI +S+P Sbjct: 12 ESINSRLQLVMKSGKYVLGYKQTLKMIRQGKAKLVILANNCPALRKSEIEYYAMLAKTGVHHYSGNNIELGTACGKYYRVCTLAIIDPGDSDIIRSMP 109
BLAST of FC921104 vs. ExPASy Swiss-Prot
Match: RL30_OPHHA (60S ribosomal protein L30 OS=Ophiophagus hannah GN=RPL30 PE=3 SV=2) HSP 1 Score: 158.688 bits (400), Expect = 1.990e-38 Identity = 73/98 (74.49%), Postives = 85/98 (86.73%), Query Frame = 3 Query: 120 ESINNRLALVMKSGKYTLGYKTVLRSLRTSKGKLIILSNNCPPLRKSEIEYYAMLAKVGVHHYNGNNVDLGTACGKYFRVSCLSIIDPGDSDITKSLP 413 ESIN+RL LVMKSGKY LGYK L+ +R K KL+IL+NNCP LRKSEIEYYAMLAK GVHHY+GNN++LGTACGKY+RV L+IIDPGDSDI +S+P Sbjct: 12 ESINSRLQLVMKSGKYVLGYKQTLKMIRQGKAKLVILANNCPALRKSEIEYYAMLAKTGVHHYSGNNIELGTACGKYYRVCTLAIIDPGDSDIIRSMP 109 The following BLAST results are available for this feature:
BLAST of FC921104 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 50
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC921104 ID=FC921104; Name=FC921104; organism=Citrus clementina; type=EST; length=592bpback to top |