FC921104
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC921104 vs. ExPASy Swiss-Prot
Match: RL30_TRYBB (60S ribosomal protein L30 OS=Trypanosoma brucei brucei GN=RPL30 PE=3 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 2.880e-29 Identity = 56/96 (58.33%), Postives = 76/96 (79.17%), Query Frame = 3 Query: 120 ESINNRLALVMKSGKYTLGYKTVLRSLRTSKGKLIILSNNCPPLRKSEIEYYAMLAKVGVHHYNGNNVDLGTACGKYFRVSCLSIIDPGDSDITKS 407 ++IN ++ LVMKSGKY LG + L++LR + KL+++S NCPP+RK+EIEYY L+K +HHY+GNN+DLGTACG++FR LSI D GDSDIT + Sbjct: 10 DTINTKIQLVMKSGKYVLGTQQSLKTLRQGRSKLVVISANCPPIRKAEIEYYCTLSKTPIHHYSGNNLDLGTACGRHFRACVLSITDVGDSDITSA 105
BLAST of FC921104 vs. ExPASy Swiss-Prot
Match: RL30_NEUCR (60S ribosomal protein L30 OS=Neurospora crassa GN=rpl-30 PE=3 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 4.912e-29 Identity = 57/93 (61.29%), Postives = 76/93 (81.72%), Query Frame = 3 Query: 120 ESINNRLALVMKSGKYTLGYKTVLRSLRTSKGKLIILSNNCPPLRKSEIEYYAMLAKVGVHHYNGNNVDLGTACGKYFRVSCLSIIDPGDSDI 398 +SI +LALV+KSGK LGY++ L++LR+ K KLI++S N PPLRKSE+EYY+M++K VHHY G N++LGTACGK FR S ++I+D GDSDI Sbjct: 11 QSIGAKLALVIKSGKVVLGYRSTLKALRSGKAKLILISANTPPLRKSELEYYSMMSKTAVHHYTGTNIELGTACGKLFRCSTMAILDAGDSDI 103
BLAST of FC921104 vs. ExPASy Swiss-Prot
Match: RL30_DICDI (60S ribosomal protein L30 OS=Dictyostelium discoideum GN=rpl30 PE=3 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 1.094e-28 Identity = 61/97 (62.89%), Postives = 79/97 (81.44%), Query Frame = 3 Query: 120 ESINNRLALVMKSGKYTLGYKTVLRSLRTSKGKLIILSNNCPPLRKSEIEYYAMLAKVGVHHYNGNNVDLGTACGKYFRVSCLSIIDPGDSDITKSL 410 E+I ++LALVMKSGK LGYK+ L++LR K KLI+L++N P +R+SEIEYYAML+K VH Y+GNNVDLGTA G+++RVS +SI D GDSDI +L Sbjct: 12 ENIGSKLALVMKSGKSQLGYKSTLKTLRAGKSKLILLASNLPSIRRSEIEYYAMLSKTTVHLYSGNNVDLGTALGRHYRVSVMSITDAGDSDILTAL 108
BLAST of FC921104 vs. ExPASy Swiss-Prot
Match: RL30_YARLI (60S ribosomal protein L30 OS=Yarrowia lipolytica GN=RPL30 PE=3 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 9.264e-28 Identity = 55/93 (59.14%), Postives = 74/93 (79.57%), Query Frame = 3 Query: 120 ESINNRLALVMKSGKYTLGYKTVLRSLRTSKGKLIILSNNCPPLRKSEIEYYAMLAKVGVHHYNGNNVDLGTACGKYFRVSCLSIIDPGDSDI 398 +++N +L L +KSGKYTLGYK+ +++LR K KL+I++ N P LRKSEIEYYAMLAK VHH+ G N +LGT+CG+ FRV ++I+D GDSDI Sbjct: 11 DNVNAKLGLAIKSGKYTLGYKSTIKALRQGKAKLVIIAGNTPALRKSEIEYYAMLAKCTVHHFQGGNNELGTSCGRLFRVGAVTIMDAGDSDI 103
BLAST of FC921104 vs. ExPASy Swiss-Prot
Match: RL30_YEAST (60S ribosomal protein L30 OS=Saccharomyces cerevisiae GN=RPL30 PE=1 SV=3) HSP 1 Score: 122.865 bits (307), Expect = 1.210e-27 Identity = 60/97 (61.86%), Postives = 77/97 (79.38%), Query Frame = 3 Query: 120 ESINNRLALVMKSGKYTLGYKTVLRSLRTSKGKLIILSNNCPPLRKSEIEYYAMLAKVGVHHYNGNNVDLGTACGKYFRVSCLSIIDPGDSDITKSL 410 ESIN +LALV+KSGKYTLGYK+ ++SLR K KLII++ N P LRKSE+EYYAML+K V+++ G N +LGTA GK FRV +SI++ GDSDI +L Sbjct: 8 ESINQKLALVIKSGKYTLGYKSTVKSLRQGKSKLIIIAANTPVLRKSELEYYAMLSKTKVYYFQGGNNELGTAVGKLFRVGVVSILEAGDSDILTTL 104
BLAST of FC921104 vs. ExPASy Swiss-Prot
Match: RL30_CANGA (60S ribosomal protein L30 OS=Candida glabrata GN=RPL30 PE=3 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 1.210e-27 Identity = 59/97 (60.82%), Postives = 77/97 (79.38%), Query Frame = 3 Query: 120 ESINNRLALVMKSGKYTLGYKTVLRSLRTSKGKLIILSNNCPPLRKSEIEYYAMLAKVGVHHYNGNNVDLGTACGKYFRVSCLSIIDPGDSDITKSL 410 ESIN +LALV+KSGK+TLGYK+ ++SLR K KLII++ N P LRKSE+EYYAML+K V+++ G N +LGTA GK FRV +S++D GDSDI +L Sbjct: 8 ESINQKLALVVKSGKFTLGYKSTIKSLRQGKSKLIIIAANTPVLRKSELEYYAMLSKTKVYYFQGGNNELGTAVGKLFRVGVVSVLDAGDSDILTAL 104
BLAST of FC921104 vs. ExPASy Swiss-Prot
Match: RL30_LEIMA (60S ribosomal protein L30 OS=Leishmania major GN=RPL30 PE=3 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 2.064e-27 Identity = 53/92 (57.61%), Postives = 72/92 (78.26%), Query Frame = 3 Query: 123 SINNRLALVMKSGKYTLGYKTVLRSLRTSKGKLIILSNNCPPLRKSEIEYYAMLAKVGVHHYNGNNVDLGTACGKYFRVSCLSIIDPGDSDI 398 +IN +L LVMKSGKY LG + L +LR + KL++++NNCPP+R++E+EYY L+K +HHY+GNN+DLGTACGK FR LS+ + GDSDI Sbjct: 11 TINAKLQLVMKSGKYVLGTQQALTTLRQGRSKLVVIANNCPPIRRAEVEYYCTLSKTPIHHYSGNNLDLGTACGKPFRTCVLSVTNVGDSDI 102
BLAST of FC921104 vs. ExPASy Swiss-Prot
Match: RL30_ASHGO (60S ribosomal protein L30 OS=Ashbya gossypii GN=RPL30 PE=3 SV=3) HSP 1 Score: 122.094 bits (305), Expect = 2.064e-27 Identity = 58/97 (59.79%), Postives = 77/97 (79.38%), Query Frame = 3 Query: 120 ESINNRLALVMKSGKYTLGYKTVLRSLRTSKGKLIILSNNCPPLRKSEIEYYAMLAKVGVHHYNGNNVDLGTACGKYFRVSCLSIIDPGDSDITKSL 410 E+IN +LALV+KSGKYTLGYK+ ++SLR K KLII++ N P LRKSE+EYYAML+K V+++ G N +LGTA GK FRV ++++D GDSDI +L Sbjct: 8 ENINQKLALVIKSGKYTLGYKSTIKSLRQGKAKLIIIAANTPVLRKSELEYYAMLSKTKVYYFQGGNNELGTAVGKLFRVGVVTVLDAGDSDILTTL 104
BLAST of FC921104 vs. ExPASy Swiss-Prot
Match: RL30_KLULA (60S ribosomal protein L30 OS=Kluyveromyces lactis GN=RPL30 PE=3 SV=2) HSP 1 Score: 120.553 bits (301), Expect = 6.005e-27 Identity = 58/97 (59.79%), Postives = 77/97 (79.38%), Query Frame = 3 Query: 120 ESINNRLALVMKSGKYTLGYKTVLRSLRTSKGKLIILSNNCPPLRKSEIEYYAMLAKVGVHHYNGNNVDLGTACGKYFRVSCLSIIDPGDSDITKSL 410 E+IN +LALV+KSGKY+LGYK+ ++SLR K KLII++ N P LRKSE+EYYAML+K V+++ G N +LGTA GK FRV ++I+D GDSDI +L Sbjct: 8 ENINQKLALVVKSGKYSLGYKSTVKSLRQGKAKLIIIAANTPVLRKSELEYYAMLSKTKVYYFQGGNNELGTAVGKLFRVGVVTILDAGDSDILTAL 104
BLAST of FC921104 vs. ExPASy Swiss-Prot
Match: RL30E_METTH (50S ribosomal protein L30e OS=Methanobacterium thermoautotrophicum GN=rpl30e PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 3.091e-15 Identity = 38/91 (41.76%), Postives = 60/91 (65.93%), Query Frame = 3 Query: 126 INNRLALVMKSGKYTLGYKTVLRSLRTSKGKLIILSNNCPPLRKSEIEYYAMLAKVGVHHYNGNNVDLGTACGKYFRVSCLSIIDPGDSDI 398 I+ + + + +G LG K ++SL+ KGKL+++++N P K +IEYYA L+++ V+ + G +V+LG+ CGK F V L I DPGDS I Sbjct: 3 IDRGIRVAVDTGNVILGSKRTIQSLKLGKGKLVVMASNIPEDLKEDIEYYAKLSEIPVYTHEGTSVELGSVCGKPFTVGALLIQDPGDSTI 93 The following BLAST results are available for this feature:
BLAST of FC921104 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 50
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Sequences
The
following sequences are available for this feature:
EST sequence >FC921104 ID=FC921104; Name=FC921104; organism=Citrus clementina; type=EST; length=592bpback to top |